RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 KIF1BPQ96EK5 621 aa17.68■□□□□ 0.42
TRAF3-202ENST00000351691 LMTK3Q96Q04 1460 aa17.68■□□□□ 0.42
TRAF3-202ENST00000351691 STRCQ7RTU9 1775 aa17.68■□□□□ 0.42
TRAF3-202ENST00000351691 NYAP1Q6ZVC0 841 aa17.68■□□□□ 0.42
TRAF3-202ENST00000351691 DRC7Q8IY82 874 aa17.68■□□□□ 0.42
TRAF3-202ENST00000351691 ABTB2Q8N961 1025 aa17.68■□□□□ 0.42
TRAF3-202ENST00000351691 IL17REQ8NFR9 667 aa17.68■□□□□ 0.42
TRAF3-202ENST00000351691 DDX19AQ9NUU7 478 aaKnown RBP17.68■□□□□ 0.42
TRAF3-202ENST00000351691 ADGRL3Q9HAR2 1447 aa17.67■□□□□ 0.42
TRAF3-202ENST00000351691 KIF2AO00139 706 aaPredicted RBP17.67■□□□□ 0.42
TRAF3-202ENST00000351691 SGSM2O43147 1006 aa17.67■□□□□ 0.42
TRAF3-202ENST00000351691 EXOC6BQ9Y2D4 811 aa17.67■□□□□ 0.42
TRAF3-202ENST00000351691 KRT85P78386 507 aa17.67■□□□□ 0.42
TRAF3-202ENST00000351691 LUZP1Q86V48 1076 aa17.67■□□□□ 0.42
TRAF3-202ENST00000351691 TRIM5Q9C035 493 aa17.67■□□□□ 0.42
TRAF3-202ENST00000351691 CRYBG1Q9Y4K1 1723 aa17.66■□□□□ 0.42
TRAF3-202ENST00000351691 GJB2P29033 226 aa17.66■□□□□ 0.42
TRAF3-202ENST00000351691 NAA30Q147X3 362 aaPredicted RBP17.66■□□□□ 0.42
TRAF3-202ENST00000351691 TSHZ3Q63HK5 1081 aa17.66■□□□□ 0.42
TRAF3-202ENST00000351691 SARM1Q6SZW1 724 aa17.66■□□□□ 0.42
TRAF3-202ENST00000351691 IP6K1Q92551 441 aa17.66■□□□□ 0.42
TRAF3-202ENST00000351691 LSG1Q9H089 658 aaKnown RBP17.66■□□□□ 0.42
TRAF3-202ENST00000351691 PHF8Q9UPP1 1060 aa17.66■□□□□ 0.42
TRAF3-202ENST00000351691 PHRF1Q9P1Y6 1649 aaKnown RBP17.66■□□□□ 0.42
TRAF3-202ENST00000351691 HOXB7P09629 217 aa17.66■□□□□ 0.42
TRAF3-202ENST00000351691 CACTINQ8WUQ7 758 aaKnown RBP17.66■□□□□ 0.42
TRAF3-202ENST00000351691 TM6SF1Q9BZW5 370 aa17.66■□□□□ 0.42
TRAF3-202ENST00000351691 MED1Q15648 1581 aaPredicted RBP17.65■□□□□ 0.42
TRAF3-202ENST00000351691 LTN1O94822 1766 aa17.65■□□□□ 0.42
TRAF3-202ENST00000351691 BMS1Q14692 1282 aaKnown RBP17.65■□□□□ 0.42
TRAF3-202ENST00000351691 ANO6Q4KMQ2 910 aa17.65■□□□□ 0.42
TRAF3-202ENST00000351691 VPS53Q5VIR6 699 aa17.65■□□□□ 0.42
TRAF3-202ENST00000351691 TNMDQ9H2S6 317 aa17.65■□□□□ 0.42
TRAF3-202ENST00000351691 HYPKQ9NX55 129 aa17.65■□□□□ 0.42
TRAF3-202ENST00000351691 CLIP2Q9UDT6 1046 aa17.65■□□□□ 0.42
TRAF3-202ENST00000351691 NRBP1Q9UHY1 535 aa17.65■□□□□ 0.42
TRAF3-202ENST00000351691 CEMIPQ8WUJ3 1361 aa17.65■□□□□ 0.42
TRAF3-202ENST00000351691 CYP2C19P33261 490 aa17.64■□□□□ 0.42
TRAF3-202ENST00000351691 PTPN14Q15678 1187 aa17.64■□□□□ 0.42
TRAF3-202ENST00000351691 UNC5CLQ8IV45 518 aa17.64■□□□□ 0.42
TRAF3-202ENST00000351691 CLSTN2Q9H4D0 955 aa17.64■□□□□ 0.42
TRAF3-202ENST00000351691 ZBTB22O15209 634 aa17.64■□□□□ 0.41
TRAF3-202ENST00000351691 TTC6Q86TZ1 520 aa17.64■□□□□ 0.41
TRAF3-202ENST00000351691 KCNB2Q92953 911 aa17.64■□□□□ 0.41
TRAF3-202ENST00000351691 MRFAP1L1Q96HT8 127 aa17.64■□□□□ 0.41
TRAF3-202ENST00000351691 ZNF215Q9UL58 517 aaPredicted RBP17.64■□□□□ 0.41
TRAF3-202ENST00000351691 NFAT5O94916 1531 aa17.64■□□□□ 0.41
TRAF3-202ENST00000351691 SLU7O95391 586 aaKnown RBP17.63■□□□□ 0.41
TRAF3-202ENST00000351691 FBXO38Q6PIJ6 1188 aa17.63■□□□□ 0.41
TRAF3-202ENST00000351691 LRRC8AQ8IWT6 810 aa17.63■□□□□ 0.41
TRAF3-202ENST00000351691 SCAND2PQ9GZW5 306 aaPredicted RBP17.63■□□□□ 0.41
TRAF3-202ENST00000351691 IL25Q9H293 177 aa17.63■□□□□ 0.41
TRAF3-202ENST00000351691 NPHP3Q7Z494 1330 aa17.62■□□□□ 0.41
TRAF3-202ENST00000351691 RAB11FIP3O75154 756 aa17.62■□□□□ 0.41
TRAF3-202ENST00000351691 LIG1P18858 919 aa17.62■□□□□ 0.41
TRAF3-202ENST00000351691 KCNH5Q8NCM2 988 aa17.62■□□□□ 0.41
TRAF3-202ENST00000351691 PDCP20941 246 aa17.62■□□□□ 0.41
TRAF3-202ENST00000351691 KDM3BQ7LBC6 1761 aa17.61■□□□□ 0.41
TRAF3-202ENST00000351691 TUBB4AP04350 444 aa17.61■□□□□ 0.41
TRAF3-202ENST00000351691 H2AFXP16104 143 aaPredicted RBP17.61■□□□□ 0.41
TRAF3-202ENST00000351691 RASEFQ8IZ41 740 aa17.61■□□□□ 0.41
TRAF3-202ENST00000351691 NOL10Q9BSC4 688 aaKnown RBP17.61■□□□□ 0.41
TRAF3-202ENST00000351691 LMO7Q8WWI1 1683 aa17.6■□□□□ 0.41
TRAF3-202ENST00000351691 UBTFL1P0CB47 393 aaPredicted RBP17.6■□□□□ 0.41
TRAF3-202ENST00000351691 HDGFL1Q5TGJ6 251 aa17.6■□□□□ 0.41
TRAF3-202ENST00000351691 NUTM2GQ5VZR2 741 aa17.6■□□□□ 0.41
TRAF3-202ENST00000351691 CCDC83Q8IWF9 413 aa17.6■□□□□ 0.41
TRAF3-202ENST00000351691 SSH3Q8TE77 659 aa17.6■□□□□ 0.41
TRAF3-202ENST00000351691 ZNF165P49910 485 aa17.6■□□□□ 0.41
TRAF3-202ENST00000351691 CCDC144BQ3MJ40 725 aa17.6■□□□□ 0.41
TRAF3-202ENST00000351691 C14orf37Q86TY3 774 aa17.6■□□□□ 0.41
TRAF3-202ENST00000351691 CCDC144CPQ8IYA2 1237 aa17.6■□□□□ 0.41
TRAF3-202ENST00000351691 BCL11BQ9C0K0 894 aaPredicted RBP17.6■□□□□ 0.41
TRAF3-202ENST00000351691 USP44Q9H0E7 712 aa17.6■□□□□ 0.41
TRAF3-202ENST00000351691 ZSWIM6Q9HCJ5 1215 aa17.6■□□□□ 0.41
TRAF3-202ENST00000351691 LRRFIP2Q9Y608 721 aaKnown RBP17.6■□□□□ 0.41
TRAF3-202ENST00000351691 ERBB3P21860 1342 aa17.6■□□□□ 0.41
TRAF3-202ENST00000351691 PNMA6EA0A0J9YXQ4 647 aa17.59■□□□□ 0.41
TRAF3-202ENST00000351691 LARGE1O95461 756 aa17.59■□□□□ 0.41
TRAF3-202ENST00000351691 CAPN2P17655 700 aa17.59■□□□□ 0.41
TRAF3-202ENST00000351691 TPRNQ4KMQ1 711 aa17.59■□□□□ 0.41
TRAF3-202ENST00000351691 LTV1Q96GA3 475 aaPredicted RBP17.59■□□□□ 0.41
TRAF3-202ENST00000351691 PDRG1Q9NUG6 133 aa17.59■□□□□ 0.41
TRAF3-202ENST00000351691 DACT1Q9NYF0 836 aa17.59■□□□□ 0.41
TRAF3-202ENST00000351691 VGLL3A8MV65 326 aa17.59■□□□□ 0.41
TRAF3-202ENST00000351691 CASTP20810 708 aaKnown RBP17.59■□□□□ 0.41
TRAF3-202ENST00000351691 ELF2Q15723 593 aa17.59■□□□□ 0.41
TRAF3-202ENST00000351691 CNTROBQ8N137 903 aa17.59■□□□□ 0.41
TRAF3-202ENST00000351691 PI4K2BQ8TCG2 481 aa17.59■□□□□ 0.41
TRAF3-202ENST00000351691 ZNF592Q92610 1267 aa17.59■□□□□ 0.41
TRAF3-202ENST00000351691 L2HGDHQ9H9P8 463 aa17.59■□□□□ 0.41
TRAF3-202ENST00000351691 XIRP1Q702N8 1843 aaKnown RBP17.58■□□□□ 0.41
TRAF3-202ENST00000351691 OVOS2A0A0G2JMS6 1433 aa17.58■□□□□ 0.4
TRAF3-202ENST00000351691 VPS37CA5D8V6 355 aaPredicted RBP17.58■□□□□ 0.4
TRAF3-202ENST00000351691 EIF4A1P60842 406 aaKnown RBP17.58■□□□□ 0.4
TRAF3-202ENST00000351691 ZNF446Q9NWS9 450 aa17.58■□□□□ 0.4
TRAF3-202ENST00000351691 NCAPD2Q15021 1401 aa17.58■□□□□ 0.4
TRAF3-202ENST00000351691 GIGYF1O75420 1035 aaPredicted RBP17.57■□□□□ 0.4
TRAF3-202ENST00000351691 POLA2Q14181 598 aa17.57■□□□□ 0.4
TRAF3-202ENST00000351691 CCAR2Q8N163 923 aaKnown RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms