RNA–Protein interactions for RNA: ENST00000350697.7

SEC13-202, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC13, Length 1,425 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-202ENST00000350697 BRIP1Q9BX63 1249 aa17.73■□□□□ 0.43
SEC13-202ENST00000350697 TRMT112Q9UI30 125 aaKnown RBP17.73■□□□□ 0.43
SEC13-202ENST00000350697 IGKV5-2P06315 115 aa17.72■□□□□ 0.43
SEC13-202ENST00000350697 NUTM1Q86Y26 1132 aa17.72■□□□□ 0.43
SEC13-202ENST00000350697 LINS1Q8NG48 757 aa17.72■□□□□ 0.43
SEC13-202ENST00000350697 CWC25Q9NXE8 425 aaPredicted RBP17.72■□□□□ 0.43
SEC13-202ENST00000350697 ANKRD31Q8N7Z5 1873 aa17.72■□□□□ 0.43
SEC13-202ENST00000350697 PDE6BP35913 854 aa17.72■□□□□ 0.43
SEC13-202ENST00000350697 ERFEQ4G0M1 354 aa17.72■□□□□ 0.43
SEC13-202ENST00000350697 NOB1Q9ULX3 412 aaKnown RBP17.72■□□□□ 0.43
SEC13-202ENST00000350697 PXDNLA1KZ92 1463 aa17.71■□□□□ 0.43
SEC13-202ENST00000350697 SH3TC1Q8TE82 1336 aa17.71■□□□□ 0.43
SEC13-202ENST00000350697 NEURL1BA8MQ27 555 aa17.71■□□□□ 0.43
SEC13-202ENST00000350697 BCAR3O75815 825 aa17.71■□□□□ 0.43
SEC13-202ENST00000350697 CWF19L2Q2TBE0 894 aaKnown RBP17.71■□□□□ 0.43
SEC13-202ENST00000350697 PDZRN3Q9UPQ7 1066 aa17.71■□□□□ 0.43
SEC13-202ENST00000350697 KIAA1551Q9HCM1 1747 aa17.7■□□□□ 0.42
SEC13-202ENST00000350697 RIC1Q4ADV7 1423 aa17.7■□□□□ 0.42
SEC13-202ENST00000350697 BEND3Q5T5X7 828 aa17.7■□□□□ 0.42
SEC13-202ENST00000350697 SLC4A10Q6U841 1118 aa17.7■□□□□ 0.42
SEC13-202ENST00000350697 ARHGAP45Q92619 1136 aa17.7■□□□□ 0.42
SEC13-202ENST00000350697 ABCC12Q96J65 1359 aa17.7■□□□□ 0.42
SEC13-202ENST00000350697 N4BP2Q86UW6 1770 aaPredicted RBP17.69■□□□□ 0.42
SEC13-202ENST00000350697 A0A0G2JLW4 131 aa17.69■□□□□ 0.42
SEC13-202ENST00000350697 IPO8O15397 1037 aaKnown RBP17.69■□□□□ 0.42
SEC13-202ENST00000350697 PCCAP05165 728 aaPredicted RBP17.69■□□□□ 0.42
SEC13-202ENST00000350697 DPEP1P16444 411 aa17.69■□□□□ 0.42
SEC13-202ENST00000350697 SLC10A5Q5PT55 438 aa17.69■□□□□ 0.42
SEC13-202ENST00000350697 ZBTB38Q8NAP3 1195 aaPredicted RBP17.69■□□□□ 0.42
SEC13-202ENST00000350697 API5Q9BZZ5 524 aaKnown RBP17.69■□□□□ 0.42
SEC13-202ENST00000350697 KLRG2A4D1S0 409 aaPredicted RBP17.68■□□□□ 0.42
SEC13-202ENST00000350697 H0YIN7 160 aa17.68■□□□□ 0.42
SEC13-202ENST00000350697 CHRNA5P30532 468 aa17.68■□□□□ 0.42
SEC13-202ENST00000350697 C2CD5Q86YS7 1000 aa17.68■□□□□ 0.42
SEC13-202ENST00000350697 SYNE4Q8N205 404 aa17.68■□□□□ 0.42
SEC13-202ENST00000350697 FAM89AQ96GI7 184 aa17.68■□□□□ 0.42
SEC13-202ENST00000350697 ALDH1L1O75891 902 aa17.67■□□□□ 0.42
SEC13-202ENST00000350697 GCKRQ14397 625 aa17.67■□□□□ 0.42
SEC13-202ENST00000350697 FRAT1Q92837 279 aaPredicted RBP17.67■□□□□ 0.42
SEC13-202ENST00000350697 SRCIN1Q9C0H9 1055 aa17.67■□□□□ 0.42
SEC13-202ENST00000350697 RCAN3Q9UKA8 241 aa17.67■□□□□ 0.42
SEC13-202ENST00000350697 DCAF8L1A6NGE4 600 aa17.66■□□□□ 0.42
SEC13-202ENST00000350697 HSP90B1P14625 803 aaKnown RBP17.66■□□□□ 0.42
SEC13-202ENST00000350697 KCNA3P22001 575 aa17.66■□□□□ 0.42
SEC13-202ENST00000350697 RTL5Q5HYW3 569 aaPredicted RBP17.66■□□□□ 0.42
SEC13-202ENST00000350697 NLRP3Q96P20 1036 aa17.66■□□□□ 0.42
SEC13-202ENST00000350697 TNRC6CQ9HCJ0 1690 aaKnown RBP17.66■□□□□ 0.42
SEC13-202ENST00000350697 DLEC1Q9Y238 1755 aa17.65■□□□□ 0.42
SEC13-202ENST00000350697 IRS4O14654 1257 aaPredicted RBP17.65■□□□□ 0.42
SEC13-202ENST00000350697 SRGNP10124 158 aa17.65■□□□□ 0.42
SEC13-202ENST00000350697 HCLS1P14317 486 aaPredicted RBP17.65■□□□□ 0.42
SEC13-202ENST00000350697 CRY2Q49AN0 593 aa17.65■□□□□ 0.42
SEC13-202ENST00000350697 ATF7IPQ6VMQ6 1270 aa17.65■□□□□ 0.42
SEC13-202ENST00000350697 PIM2Q9P1W9 311 aa17.65■□□□□ 0.42
SEC13-202ENST00000350697 COL11A2P13942 1736 aaPredicted RBP17.65■□□□□ 0.42
SEC13-202ENST00000350697 CDHR2Q9BYE9 1310 aa17.65■□□□□ 0.42
SEC13-202ENST00000350697 H7C1W4 665 aa17.64■□□□□ 0.42
SEC13-202ENST00000350697 BRCA1P38398 1863 aaKnown RBP17.64■□□□□ 0.42
SEC13-202ENST00000350697 ZKSCAN2Q63HK3 967 aa17.64■□□□□ 0.42
SEC13-202ENST00000350697 MASTLQ96GX5 879 aa17.64■□□□□ 0.42
SEC13-202ENST00000350697 DDX60Q8IY21 1712 aaKnown RBP17.64■□□□□ 0.41
SEC13-202ENST00000350697 LAMB2P55268 1798 aa17.64■□□□□ 0.41
SEC13-202ENST00000350697 TRIM27P14373 513 aa17.64■□□□□ 0.41
SEC13-202ENST00000350697 NPR1P16066 1061 aa17.64■□□□□ 0.41
SEC13-202ENST00000350697 CCT4P50991 539 aaKnown RBP17.64■□□□□ 0.41
SEC13-202ENST00000350697 STYK1Q6J9G0 422 aa17.64■□□□□ 0.41
SEC13-202ENST00000350697 UBE3BQ7Z3V4 1068 aa17.64■□□□□ 0.41
SEC13-202ENST00000350697 JARID2Q92833 1246 aaPredicted RBP17.64■□□□□ 0.41
SEC13-202ENST00000350697 C3orf67Q6ZVT6 689 aa17.63■□□□□ 0.41
SEC13-202ENST00000350697 ZNF622Q969S3 477 aaKnown RBP eCLIP17.63■□□□□ 0.41
SEC13-202ENST00000350697 ABCC4O15439 1325 aa17.62■□□□□ 0.41
SEC13-202ENST00000350697 GRM8O00222 908 aa17.62■□□□□ 0.41
SEC13-202ENST00000350697 PDE8AO60658 829 aa17.62■□□□□ 0.41
SEC13-202ENST00000350697 DALRD3Q5D0E6 543 aaKnown RBP17.62■□□□□ 0.41
SEC13-202ENST00000350697 TTLL6Q8N841 843 aa17.62■□□□□ 0.41
SEC13-202ENST00000350697 RPGRQ92834 1020 aaKnown RBP17.62■□□□□ 0.41
SEC13-202ENST00000350697 C9orf78Q9NZ63 289 aaPredicted RBP17.62■□□□□ 0.41
SEC13-202ENST00000350697 CASP7P55210 303 aa17.61■□□□□ 0.41
SEC13-202ENST00000350697 GPR162Q16538 588 aa17.61■□□□□ 0.41
SEC13-202ENST00000350697 PELP1Q8IZL8 1130 aaKnown RBP17.61■□□□□ 0.41
SEC13-202ENST00000350697 CNKSR1Q969H4 720 aa17.61■□□□□ 0.41
SEC13-202ENST00000350697 WWC3Q9ULE0 1092 aa17.61■□□□□ 0.41
SEC13-202ENST00000350697 HOXA10P31260 410 aaPredicted RBP17.6■□□□□ 0.41
SEC13-202ENST00000350697 SF3B3Q15393 1217 aaKnown RBP17.6■□□□□ 0.41
SEC13-202ENST00000350697 INTS3Q68E01 1043 aaKnown RBP17.6■□□□□ 0.41
SEC13-202ENST00000350697 RBM17Q96I25 401 aaKnown RBP17.6■□□□□ 0.41
SEC13-202ENST00000350697 BCS1LQ9Y276 419 aa17.6■□□□□ 0.41
SEC13-202ENST00000350697 ALDH1B1P30837 517 aa17.59■□□□□ 0.41
SEC13-202ENST00000350697 CLUAP1Q96AJ1 413 aa17.59■□□□□ 0.41
SEC13-202ENST00000350697 CRAMP1Q96RY5 1269 aa17.59■□□□□ 0.41
SEC13-202ENST00000350697 PLA2G12BQ9BX93 195 aa17.59■□□□□ 0.41
SEC13-202ENST00000350697 TNNQ9UQP3 1299 aa17.59■□□□□ 0.41
SEC13-202ENST00000350697 UTYO14607 1347 aa17.59■□□□□ 0.41
SEC13-202ENST00000350697 MYH3P11055 1940 aa17.58■□□□□ 0.41
SEC13-202ENST00000350697 YBX3P16989 372 aaKnown RBP eCLIP17.58■□□□□ 0.419e-10■■□□□ 14.4
SEC13-202ENST00000350697 CTSWP56202 376 aa17.58■□□□□ 0.41
SEC13-202ENST00000350697 FTSJ3Q8IY81 847 aaKnown RBP17.58■□□□□ 0.41
SEC13-202ENST00000350697 DZIP1LQ8IYY4 767 aaKnown RBP17.58■□□□□ 0.41
SEC13-202ENST00000350697 ARFGEF1Q9Y6D6 1849 aa17.58■□□□□ 0.4
SEC13-202ENST00000350697 GOLGB1Q14789 3259 aaKnown RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms