RNA–Protein interactions for RNA: ENST00000350498.7

PDAP1-201, Transcript of PDGFA associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDAP1, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-201ENST00000350498 ANKRD13DQ6ZTN6 518 aa19.99■□□□□ 0.79
PDAP1-201ENST00000350498 UBE3BQ7Z3V4 1068 aa19.99■□□□□ 0.79
PDAP1-201ENST00000350498 PDLIM2Q96JY6 352 aa19.99■□□□□ 0.79
PDAP1-201ENST00000350498 UTYO14607 1347 aa19.98■□□□□ 0.79
PDAP1-201ENST00000350498 OVOS2A0A0G2JMS6 1433 aa19.98■□□□□ 0.79
PDAP1-201ENST00000350498 SCN11AQ9UI33 1791 aa19.98■□□□□ 0.79
PDAP1-201ENST00000350498 LARP1Q6PKG0 1096 aaKnown RBP19.98■□□□□ 0.79
PDAP1-201ENST00000350498 IL17RAQ96F46 866 aa19.98■□□□□ 0.79
PDAP1-201ENST00000350498 METTL22Q9BUU2 404 aaPredicted RBP19.98■□□□□ 0.79
PDAP1-201ENST00000350498 CHMP4AQ9BY43 222 aa19.98■□□□□ 0.79
PDAP1-201ENST00000350498 A0A0D9SFI3 127 aa19.98■□□□□ 0.79
PDAP1-201ENST00000350498 JAKMIP1Q96N16 626 aaKnown RBP19.98■□□□□ 0.79
PDAP1-201ENST00000350498 TTC5Q8N0Z6 440 aa19.97■□□□□ 0.79
PDAP1-201ENST00000350498 RPAP1Q9BWH6 1393 aaPredicted RBP19.97■□□□□ 0.79
PDAP1-201ENST00000350498 ADAMTS7Q9UKP4 1686 aa19.97■□□□□ 0.79
PDAP1-201ENST00000350498 COL18A1P39060 1754 aa19.96■□□□□ 0.79
PDAP1-201ENST00000350498 CABP4P57796 275 aa19.96■□□□□ 0.79
PDAP1-201ENST00000350498 INTS4Q96HW7 963 aaKnown RBP19.96■□□□□ 0.79
PDAP1-201ENST00000350498 R3HCC1Q9Y3T6 440 aaKnown RBP19.96■□□□□ 0.79
PDAP1-201ENST00000350498 NEXNQ0ZGT2 675 aa19.96■□□□□ 0.79
PDAP1-201ENST00000350498 CCDC83Q8IWF9 413 aa19.96■□□□□ 0.79
PDAP1-201ENST00000350498 OFD1O75665 1012 aa19.95■□□□□ 0.78
PDAP1-201ENST00000350498 SNRPA1P09661 255 aaKnown RBP19.95■□□□□ 0.78
PDAP1-201ENST00000350498 SLFNL1Q499Z3 407 aa19.95■□□□□ 0.78
PDAP1-201ENST00000350498 ZNF589Q86UQ0 364 aaPredicted RBP19.95■□□□□ 0.78
PDAP1-201ENST00000350498 USP48Q86UV5 1035 aa19.95■□□□□ 0.78
PDAP1-201ENST00000350498 NECAB1Q8N987 351 aa19.95■□□□□ 0.78
PDAP1-201ENST00000350498 CRYBG1Q9Y4K1 1723 aa19.95■□□□□ 0.78
PDAP1-201ENST00000350498 RBM10P98175 930 aaKnown RBP19.95■□□□□ 0.78
PDAP1-201ENST00000350498 ST3GAL1Q11201 340 aa19.95■□□□□ 0.78
PDAP1-201ENST00000350498 TFCP2Q12800 502 aa19.95■□□□□ 0.78
PDAP1-201ENST00000350498 NOL7Q9UMY1 257 aaKnown RBP19.95■□□□□ 0.78
PDAP1-201ENST00000350498 RBM8AQ9Y5S9 174 aaKnown RBP19.95■□□□□ 0.78
PDAP1-201ENST00000350498 KIF1AQ12756 1690 aa19.94■□□□□ 0.78
PDAP1-201ENST00000350498 NBPF26B4DH59 902 aa19.94■□□□□ 0.78
PDAP1-201ENST00000350498 NBPF14Q5TI25 921 aa19.94■□□□□ 0.78
PDAP1-201ENST00000350498 NBPF10Q6P3W6 841 aaKnown RBP19.94■□□□□ 0.78
PDAP1-201ENST00000350498 ERC1Q8IUD2 1116 aa19.94■□□□□ 0.78
PDAP1-201ENST00000350498 NBPF15Q8N660 670 aa19.94■□□□□ 0.78
PDAP1-201ENST00000350498 EVI5LQ96CN4 794 aa19.94■□□□□ 0.78
PDAP1-201ENST00000350498 DCAF5Q96JK2 942 aa19.94■□□□□ 0.78
PDAP1-201ENST00000350498 TTLL7Q6ZT98 887 aa19.94■□□□□ 0.78
PDAP1-201ENST00000350498 A0A087WZG4 1122 aa19.93■□□□□ 0.78
PDAP1-201ENST00000350498 PTPN12Q05209 780 aaKnown RBP19.93■□□□□ 0.78
PDAP1-201ENST00000350498 NECTIN1Q15223 517 aa19.93■□□□□ 0.78
PDAP1-201ENST00000350498 FSD1Q9BTV5 496 aa19.93■□□□□ 0.78
PDAP1-201ENST00000350498 CNPY2Q9Y2B0 182 aa19.93■□□□□ 0.78
PDAP1-201ENST00000350498 RFX5P48382 616 aaPredicted RBP19.93■□□□□ 0.78
PDAP1-201ENST00000350498 DBNLQ9UJU6 430 aaKnown RBP19.93■□□□□ 0.78
PDAP1-201ENST00000350498 LIMCH1Q9UPQ0 1083 aa19.93■□□□□ 0.78
PDAP1-201ENST00000350498 SPATA31A3Q5VYP0 1347 aa19.92■□□□□ 0.78
PDAP1-201ENST00000350498 CCDC171Q6TFL3 1326 aa19.92■□□□□ 0.78
PDAP1-201ENST00000350498 A1BGP04217 495 aa19.92■□□□□ 0.78
PDAP1-201ENST00000350498 GPATCH3Q96I76 525 aa19.92■□□□□ 0.78
PDAP1-201ENST00000350498 FMNL2Q96PY5 1086 aa19.92■□□□□ 0.78
PDAP1-201ENST00000350498 SEC62Q99442 399 aaKnown RBP19.92■□□□□ 0.78
PDAP1-201ENST00000350498 SYT1P21579 422 aa19.92■□□□□ 0.78
PDAP1-201ENST00000350498 KCNJ4P48050 445 aa19.92■□□□□ 0.78
PDAP1-201ENST00000350498 CREB3L3Q68CJ9 461 aa19.92■□□□□ 0.78
PDAP1-201ENST00000350498 PDRG1Q9NUG6 133 aa19.92■□□□□ 0.78
PDAP1-201ENST00000350498 CCDC129Q6ZRS4 1044 aa19.91■□□□□ 0.78
PDAP1-201ENST00000350498 CHMP3Q9Y3E7 222 aa19.91■□□□□ 0.78
PDAP1-201ENST00000350498 MBD3O95983 291 aa19.91■□□□□ 0.78
PDAP1-201ENST00000350498 ME3Q16798 604 aa19.91■□□□□ 0.78
PDAP1-201ENST00000350498 RRP9O43818 475 aaKnown RBP19.9■□□□□ 0.78
PDAP1-201ENST00000350498 RUFY2Q8WXA3 655 aa19.9■□□□□ 0.78
PDAP1-201ENST00000350498 DBNDD2Q9BQY9 259 aa19.9■□□□□ 0.78
PDAP1-201ENST00000350498 TNS3Q68CZ2 1445 aa19.9■□□□□ 0.78
PDAP1-201ENST00000350498 BRINP3Q76B58 766 aa19.9■□□□□ 0.78
PDAP1-201ENST00000350498 COL15A1P39059 1388 aa19.9■□□□□ 0.78
PDAP1-201ENST00000350498 LMBR1LQ6UX01 489 aa19.89■□□□□ 0.77
PDAP1-201ENST00000350498 TOM1L2Q6ZVM7 507 aa19.89■□□□□ 0.77
PDAP1-201ENST00000350498 ZNF830Q96NB3 372 aaPredicted RBP19.89■□□□□ 0.77
PDAP1-201ENST00000350498 TPCN1Q9ULQ1 816 aa19.89■□□□□ 0.77
PDAP1-201ENST00000350498 ZKSCAN5Q9Y2L8 839 aa19.89■□□□□ 0.77
PDAP1-201ENST00000350498 SLC27A2O14975 620 aa19.89■□□□□ 0.77
PDAP1-201ENST00000350498 GJB2P29033 226 aa19.89■□□□□ 0.77
PDAP1-201ENST00000350498 CADPS2Q86UW7 1296 aa19.89■□□□□ 0.77
PDAP1-201ENST00000350498 MAP4K1Q92918 833 aa19.89■□□□□ 0.77
PDAP1-201ENST00000350498 DNAJC2Q99543 621 aaKnown RBP19.89■□□□□ 0.77
PDAP1-201ENST00000350498 TSPY26PQ9H489 355 aa19.89■□□□□ 0.77
PDAP1-201ENST00000350498 ZBTB3Q9H5J0 574 aa19.89■□□□□ 0.77
PDAP1-201ENST00000350498 ZSWIM6Q9HCJ5 1215 aa19.89■□□□□ 0.77
PDAP1-201ENST00000350498 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.89■□□□□ 0.779e-9■□□□□ 9.3
PDAP1-201ENST00000350498 TPM2P07951 284 aa19.87■□□□□ 0.77
PDAP1-201ENST00000350498 TNNI3KQ59H18 835 aa19.87■□□□□ 0.77
PDAP1-201ENST00000350498 ZNF594Q96JF6 807 aaPredicted RBP19.87■□□□□ 0.77
PDAP1-201ENST00000350498 PRDM11Q9NQV5 511 aa19.87■□□□□ 0.77
PDAP1-201ENST00000350498 STRN4Q9NRL3 753 aa19.87■□□□□ 0.77
PDAP1-201ENST00000350498 SMC3Q9UQE7 1217 aa19.87■□□□□ 0.77
PDAP1-201ENST00000350498 FPGT-TNNI3KV9GXZ4 949 aa19.87■□□□□ 0.77
PDAP1-201ENST00000350498 EPB41L2O43491 1005 aaKnown RBP19.87■□□□□ 0.77
PDAP1-201ENST00000350498 STX6O43752 255 aa19.87■□□□□ 0.77
PDAP1-201ENST00000350498 WDR33Q9C0J8 1336 aaKnown RBP19.87■□□□□ 0.77
PDAP1-201ENST00000350498 CASP7P55210 303 aa19.86■□□□□ 0.77
PDAP1-201ENST00000350498 DDX46Q7L014 1031 aaKnown RBP19.86■□□□□ 0.77
PDAP1-201ENST00000350498 ZNF330Q9Y3S2 320 aaPredicted RBP19.86■□□□□ 0.77
PDAP1-201ENST00000350498 CYP46A1Q9Y6A2 500 aa19.86■□□□□ 0.77
PDAP1-201ENST00000350498 AFDNP55196 1824 aaKnown RBP19.86■□□□□ 0.77
PDAP1-201ENST00000350498 ZNF500O60304 480 aaPredicted RBP19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms