RNA–Protein interactions for RNA: ENST00000349258.8

THSD1-202, Transcript of thrombospondin type 1 domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene THSD1, Length 3,189 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD1-202ENST00000349258 PTPN12Q05209 780 aaKnown RBP20.19■□□□□ 0.82
THSD1-202ENST00000349258 NMIQ13287 307 aaPredicted RBP20.19■□□□□ 0.82
THSD1-202ENST00000349258 DBNDD2Q9BQY9 259 aa20.18■□□□□ 0.82
THSD1-202ENST00000349258 PANK2Q9BZ23 570 aa20.18■□□□□ 0.82
THSD1-202ENST00000349258 LSG1Q9H089 658 aaKnown RBP20.18■□□□□ 0.82
THSD1-202ENST00000349258 HSPA4P34932 840 aa20.18■□□□□ 0.82
THSD1-202ENST00000349258 COL5A2P05997 1499 aaPredicted RBP20.18■□□□□ 0.82
THSD1-202ENST00000349258 TIMM10P62072 90 aa20.18■□□□□ 0.82
THSD1-202ENST00000349258 ERVV-2B6SEH9 535 aa20.17■□□□□ 0.82
THSD1-202ENST00000349258 PRPF40AO75400 957 aaKnown RBP20.17■□□□□ 0.82
THSD1-202ENST00000349258 NUCB2P80303 420 aa20.17■□□□□ 0.82
THSD1-202ENST00000349258 RUFY2Q8WXA3 655 aa20.17■□□□□ 0.82
THSD1-202ENST00000349258 PIGBQ92521 554 aa20.17■□□□□ 0.82
THSD1-202ENST00000349258 EVI5LQ96CN4 794 aa20.17■□□□□ 0.82
THSD1-202ENST00000349258 JAKMIP1Q96N16 626 aaKnown RBP20.17■□□□□ 0.82
THSD1-202ENST00000349258 DBNLQ9UJU6 430 aaKnown RBP20.17■□□□□ 0.82
THSD1-202ENST00000349258 RAD50Q92878 1312 aa20.17■□□□□ 0.82
THSD1-202ENST00000349258 DDX46Q7L014 1031 aaKnown RBP20.17■□□□□ 0.82
THSD1-202ENST00000349258 CWC25Q9NXE8 425 aaPredicted RBP20.17■□□□□ 0.82
THSD1-202ENST00000349258 COL18A1P39060 1754 aa20.17■□□□□ 0.82
THSD1-202ENST00000349258 UTYO14607 1347 aa20.16■□□□□ 0.82
THSD1-202ENST00000349258 FAM177BA6PVY3 158 aa20.16■□□□□ 0.82
THSD1-202ENST00000349258 ADCK5Q3MIX3 580 aa20.16■□□□□ 0.82
THSD1-202ENST00000349258 SLFNL1Q499Z3 407 aa20.16■□□□□ 0.82
THSD1-202ENST00000349258 SYNE4Q8N205 404 aa20.16■□□□□ 0.82
THSD1-202ENST00000349258 A0A0D9SFI3 127 aa20.16■□□□□ 0.82
THSD1-202ENST00000349258 FAM89AQ96GI7 184 aa20.16■□□□□ 0.82
THSD1-202ENST00000349258 C5P01031 1676 aa20.16■□□□□ 0.82
THSD1-202ENST00000349258 TNNI3KQ59H18 835 aa20.15■□□□□ 0.82
THSD1-202ENST00000349258 FPGT-TNNI3KV9GXZ4 949 aa20.15■□□□□ 0.82
THSD1-202ENST00000349258 PIP4K2BP78356 416 aa20.14■□□□□ 0.82
THSD1-202ENST00000349258 ZDHHC9Q9Y397 364 aa20.14■□□□□ 0.82
THSD1-202ENST00000349258 AK2P54819 239 aa20.14■□□□□ 0.81
THSD1-202ENST00000349258 COL9A3Q14050 684 aaPredicted RBP20.14■□□□□ 0.81
THSD1-202ENST00000349258 LRRC24Q50LG9 513 aa20.14■□□□□ 0.81
THSD1-202ENST00000349258 SCN11AQ9UI33 1791 aa20.14■□□□□ 0.81
THSD1-202ENST00000349258 CCDC129Q6ZRS4 1044 aa20.14■□□□□ 0.81
THSD1-202ENST00000349258 GDPD2Q9HCC8 539 aa20.14■□□□□ 0.81
THSD1-202ENST00000349258 ANAPC15P60006 121 aa20.13■□□□□ 0.81
THSD1-202ENST00000349258 SEC62Q99442 399 aaKnown RBP20.13■□□□□ 0.81
THSD1-202ENST00000349258 PUS3Q9BZE2 481 aaKnown RBP20.13■□□□□ 0.81
THSD1-202ENST00000349258 ACSBG1Q96GR2 724 aa20.13■□□□□ 0.81
THSD1-202ENST00000349258 CWC22Q9HCG8 908 aaKnown RBP20.13■□□□□ 0.81
THSD1-202ENST00000349258 RBM8AQ9Y5S9 174 aaKnown RBP20.13■□□□□ 0.81
THSD1-202ENST00000349258 XRCC6P12956 609 aaKnown RBP eCLIP20.12■□□□□ 0.81
THSD1-202ENST00000349258 CAVIN1Q6NZI2 390 aaKnown RBP20.12■□□□□ 0.81
THSD1-202ENST00000349258 RFX5P48382 616 aaPredicted RBP20.12■□□□□ 0.81
THSD1-202ENST00000349258 ZNF589Q86UQ0 364 aaPredicted RBP20.12■□□□□ 0.81
THSD1-202ENST00000349258 COPRSQ9NQ92 184 aa20.11■□□□□ 0.81
THSD1-202ENST00000349258 TAF6LQ9Y6J9 622 aa20.11■□□□□ 0.81
THSD1-202ENST00000349258 TAF7LQ5H9L4 462 aa20.11■□□□□ 0.81
THSD1-202ENST00000349258 SNRKQ9NRH2 765 aa20.11■□□□□ 0.81
THSD1-202ENST00000349258 TBC1D2BQ9UPU7 963 aa20.1■□□□□ 0.81
THSD1-202ENST00000349258 XIRP1Q702N8 1843 aaKnown RBP20.1■□□□□ 0.81
THSD1-202ENST00000349258 FOXO4P98177 505 aa20.1■□□□□ 0.81
THSD1-202ENST00000349258 SIPA1L3O60292 1781 aaPredicted RBP20.1■□□□□ 0.81
THSD1-202ENST00000349258 ZKSCAN1P17029 563 aaPredicted RBP20.09■□□□□ 0.81
THSD1-202ENST00000349258 PRIM1P49642 420 aaKnown RBP20.09■□□□□ 0.81
THSD1-202ENST00000349258 MCM2P49736 904 aa20.09■□□□□ 0.81
THSD1-202ENST00000349258 GAS2L3Q86XJ1 694 aa20.09■□□□□ 0.81
THSD1-202ENST00000349258 CCDC83Q8IWF9 413 aa20.09■□□□□ 0.81
THSD1-202ENST00000349258 NECAB1Q8N987 351 aa20.09■□□□□ 0.81
THSD1-202ENST00000349258 ATG3Q9NT62 314 aa20.09■□□□□ 0.81
THSD1-202ENST00000349258 RBM27Q9P2N5 1060 aaKnown RBP20.09■□□□□ 0.81
THSD1-202ENST00000349258 GOLIM4O00461 696 aa20.09■□□□□ 0.81
THSD1-202ENST00000349258 EXOC5O00471 708 aa20.09■□□□□ 0.81
THSD1-202ENST00000349258 LARGE1O95461 756 aa20.09■□□□□ 0.81
THSD1-202ENST00000349258 L1TD1Q5T7N2 865 aaKnown RBP20.09■□□□□ 0.81
THSD1-202ENST00000349258 CCDC171Q6TFL3 1326 aa20.09■□□□□ 0.81
THSD1-202ENST00000349258 USP42Q9H9J4 1324 aaKnown RBP20.09■□□□□ 0.81
THSD1-202ENST00000349258 STRCQ7RTU9 1775 aa20.09■□□□□ 0.81
THSD1-202ENST00000349258 CASP7P55210 303 aa20.08■□□□□ 0.81
THSD1-202ENST00000349258 GORABQ5T7V8 394 aa20.08■□□□□ 0.81
THSD1-202ENST00000349258 KIF6Q6ZMV9 814 aa20.08■□□□□ 0.81
THSD1-202ENST00000349258 RUFY3Q7L099 469 aa20.08■□□□□ 0.81
THSD1-202ENST00000349258 PDRG1Q9NUG6 133 aa20.08■□□□□ 0.81
THSD1-202ENST00000349258 H7C1W4 665 aa20.08■□□□□ 0.8
THSD1-202ENST00000349258 STK3Q13188 491 aa20.07■□□□□ 0.8
THSD1-202ENST00000349258 HLFQ16534 295 aa20.07■□□□□ 0.8
THSD1-202ENST00000349258 CCDC57Q2TAC2 916 aa20.07■□□□□ 0.8
THSD1-202ENST00000349258 CREB3L3Q68CJ9 461 aa20.07■□□□□ 0.8
THSD1-202ENST00000349258 STARD3NLO95772 234 aa20.07■□□□□ 0.8
THSD1-202ENST00000349258 FKBP4Q02790 459 aaKnown RBP eCLIP20.07■□□□□ 0.8
THSD1-202ENST00000349258 NKX1-1Q15270 411 aaPredicted RBP20.07■□□□□ 0.8
THSD1-202ENST00000349258 CYP46A1Q9Y6A2 500 aa20.07■□□□□ 0.8
THSD1-202ENST00000349258 RABL6Q3YEC7 729 aaPredicted RBP20.06■□□□□ 0.8
THSD1-202ENST00000349258 SKOR2Q2VWA4 1001 aaPredicted RBP20.05■□□□□ 0.8
THSD1-202ENST00000349258 CCDC191Q8NCU4 936 aa20.05■□□□□ 0.8
THSD1-202ENST00000349258 CYP2E1P05181 493 aaPredicted RBP20.05■□□□□ 0.8
THSD1-202ENST00000349258 LIMCH1Q9UPQ0 1083 aa20.05■□□□□ 0.8
THSD1-202ENST00000349258 ZBTB1Q9Y2K1 713 aa20.05■□□□□ 0.8
THSD1-202ENST00000349258 HSP90AB3PQ58FF7 597 aa20.04■□□□□ 0.8
THSD1-202ENST00000349258 LMBRD1Q9NUN5 540 aa20.04■□□□□ 0.8
THSD1-202ENST00000349258 TCIRG1Q13488 830 aa20.04■□□□□ 0.8
THSD1-202ENST00000349258 ATG9AQ7Z3C6 839 aa20.04■□□□□ 0.8
THSD1-202ENST00000349258 LRRC2Q9BYS8 371 aa20.04■□□□□ 0.8
THSD1-202ENST00000349258 GRPEL1Q9HAV7 217 aa20.04■□□□□ 0.8
THSD1-202ENST00000349258 NSFL1CQ9UNZ2 370 aaKnown RBP20.04■□□□□ 0.8
THSD1-202ENST00000349258 SMC3Q9UQE7 1217 aa20.04■□□□□ 0.8
THSD1-202ENST00000349258 PPFIA3O75145 1194 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms