RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 PIP4K2BP78356 416 aa24.69■■□□□ 1.54
CHRNA3-202ENST00000348639 CWC27Q6UX04 472 aaKnown RBP24.69■■□□□ 1.54
CHRNA3-202ENST00000348639 GBP4Q96PP9 640 aa24.69■■□□□ 1.54
CHRNA3-202ENST00000348639 LSG1Q9H089 658 aaKnown RBP24.69■■□□□ 1.54
CHRNA3-202ENST00000348639 DIAPH3Q9NSV4 1193 aa24.69■■□□□ 1.54
CHRNA3-202ENST00000348639 CCDC191Q8NCU4 936 aa24.69■■□□□ 1.54
CHRNA3-202ENST00000348639 SYTL4Q96C24 671 aaPredicted RBP24.69■■□□□ 1.54
CHRNA3-202ENST00000348639 ATG3Q9NT62 314 aa24.69■■□□□ 1.54
CHRNA3-202ENST00000348639 KAT6BQ8WYB5 2073 aa24.68■■□□□ 1.54
CHRNA3-202ENST00000348639 TLR7Q9NYK1 1049 aaKnown RBP24.68■■□□□ 1.54
CHRNA3-202ENST00000348639 PHLPP1O60346 1717 aa24.68■■□□□ 1.54
CHRNA3-202ENST00000348639 FOXO4P98177 505 aa24.68■■□□□ 1.54
CHRNA3-202ENST00000348639 KIAA1211Q6ZU35 1233 aa24.68■■□□□ 1.54
CHRNA3-202ENST00000348639 NUTM2BA6NNL0 878 aaPredicted RBP24.67■■□□□ 1.54
CHRNA3-202ENST00000348639 NUTM2EB1AL46 878 aaPredicted RBP24.67■■□□□ 1.54
CHRNA3-202ENST00000348639 NUTM2AQ8IVF1 878 aaPredicted RBP24.67■■□□□ 1.54
CHRNA3-202ENST00000348639 DNAJC10Q8IXB1 793 aa24.67■■□□□ 1.54
CHRNA3-202ENST00000348639 LMBR1LQ6UX01 489 aa24.66■■□□□ 1.54
CHRNA3-202ENST00000348639 HIP1O00291 1037 aa24.65■■□□□ 1.54
CHRNA3-202ENST00000348639 NUCB2P80303 420 aa24.65■■□□□ 1.54
CHRNA3-202ENST00000348639 CLEC17AQ6ZS10 378 aa24.65■■□□□ 1.54
CHRNA3-202ENST00000348639 PLCH1Q4KWH8 1693 aa24.65■■□□□ 1.54
CHRNA3-202ENST00000348639 ITGB4P16144 1822 aa24.65■■□□□ 1.54
CHRNA3-202ENST00000348639 TRAK2O60296 914 aa24.64■■□□□ 1.53
CHRNA3-202ENST00000348639 SSFA2P28290 1259 aa24.64■■□□□ 1.53
CHRNA3-202ENST00000348639 TFCP2Q12800 502 aa24.64■■□□□ 1.53
CHRNA3-202ENST00000348639 TNNI3KQ59H18 835 aa24.64■■□□□ 1.53
CHRNA3-202ENST00000348639 TMX3Q96JJ7 454 aa24.64■■□□□ 1.53
CHRNA3-202ENST00000348639 ARXQ96QS3 562 aa24.64■■□□□ 1.53
CHRNA3-202ENST00000348639 FPGT-TNNI3KV9GXZ4 949 aa24.64■■□□□ 1.53
CHRNA3-202ENST00000348639 TJP1Q07157 1748 aa24.63■■□□□ 1.53
CHRNA3-202ENST00000348639 STARD3NLO95772 234 aa24.63■■□□□ 1.53
CHRNA3-202ENST00000348639 CHMP3Q9Y3E7 222 aa24.63■■□□□ 1.53
CHRNA3-202ENST00000348639 LRP6O75581 1613 aa24.63■■□□□ 1.53
CHRNA3-202ENST00000348639 ISCA1Q9BUE6 129 aa24.62■■□□□ 1.53
CHRNA3-202ENST00000348639 BOLA2Q9H3K6 86 aa24.62■■□□□ 1.53
CHRNA3-202ENST00000348639 BCL9O00512 1426 aa24.62■■□□□ 1.53
CHRNA3-202ENST00000348639 ZGPATQ8N5A5 531 aaKnown RBP24.62■■□□□ 1.53
CHRNA3-202ENST00000348639 CYP2E1P05181 493 aaPredicted RBP24.61■■□□□ 1.53
CHRNA3-202ENST00000348639 PTMSP20962 102 aa24.61■■□□□ 1.53
CHRNA3-202ENST00000348639 CERKQ8TCT0 537 aa24.61■■□□□ 1.53
CHRNA3-202ENST00000348639 SNX14Q9Y5W7 946 aa24.61■■□□□ 1.53
CHRNA3-202ENST00000348639 TOM1O60784 492 aa24.61■■□□□ 1.53
CHRNA3-202ENST00000348639 TCIRG1Q13488 830 aa24.61■■□□□ 1.53
CHRNA3-202ENST00000348639 CUL4AQ13619 759 aa24.61■■□□□ 1.53
CHRNA3-202ENST00000348639 DBNLQ9UJU6 430 aaKnown RBP24.61■■□□□ 1.53
CHRNA3-202ENST00000348639 A0A0G2JS52 829 aa24.6■■□□□ 1.53
CHRNA3-202ENST00000348639 ATP5JP18859 108 aa24.6■■□□□ 1.53
CHRNA3-202ENST00000348639 TRIM28Q13263 835 aaKnown RBP24.6■■□□□ 1.53
CHRNA3-202ENST00000348639 UPF3BQ9BZI7 483 aaKnown RBP24.6■■□□□ 1.53
CHRNA3-202ENST00000348639 SPATA31A1Q5TZJ5 1347 aa24.6■■□□□ 1.53
CHRNA3-202ENST00000348639 PRIM1P49642 420 aaKnown RBP24.59■■□□□ 1.53
CHRNA3-202ENST00000348639 SNRKQ9NRH2 765 aa24.59■■□□□ 1.53
CHRNA3-202ENST00000348639 UBAP1LF5GYI3 381 aa24.59■■□□□ 1.53
CHRNA3-202ENST00000348639 DDB1Q16531 1140 aa24.59■■□□□ 1.53
CHRNA3-202ENST00000348639 KIF6Q6ZMV9 814 aa24.59■■□□□ 1.53
CHRNA3-202ENST00000348639 CCDC9Q9Y3X0 531 aaKnown RBP24.59■■□□□ 1.53
CHRNA3-202ENST00000348639 PTH1RQ03431 593 aa24.57■■□□□ 1.52
CHRNA3-202ENST00000348639 RASEFQ8IZ41 740 aa24.57■■□□□ 1.52
CHRNA3-202ENST00000348639 INTS4Q96HW7 963 aaKnown RBP24.57■■□□□ 1.52
CHRNA3-202ENST00000348639 CDCA7Q9BWT1 371 aaPredicted RBP24.57■■□□□ 1.52
CHRNA3-202ENST00000348639 NMIQ13287 307 aaPredicted RBP24.57■■□□□ 1.52
CHRNA3-202ENST00000348639 ATG9AQ7Z3C6 839 aa24.57■■□□□ 1.52
CHRNA3-202ENST00000348639 SLC4A9Q96Q91 983 aa24.57■■□□□ 1.52
CHRNA3-202ENST00000348639 FSD1Q9BTV5 496 aa24.57■■□□□ 1.52
CHRNA3-202ENST00000348639 THRAP3Q9Y2W1 955 aaKnown RBP24.57■■□□□ 1.52
CHRNA3-202ENST00000348639 WNK3Q9BYP7 1800 aa24.57■■□□□ 1.52
CHRNA3-202ENST00000348639 KCNB2Q92953 911 aa24.56■■□□□ 1.52
CHRNA3-202ENST00000348639 FAM227BQ96M60 508 aa24.56■■□□□ 1.52
CHRNA3-202ENST00000348639 CCDC171Q6TFL3 1326 aa24.56■■□□□ 1.52
CHRNA3-202ENST00000348639 GPR108Q9NPR9 543 aa24.56■■□□□ 1.52
CHRNA3-202ENST00000348639 BAG4O95429 457 aaKnown RBP24.55■■□□□ 1.52
CHRNA3-202ENST00000348639 IL15P40933 162 aaPredicted RBP24.55■■□□□ 1.52
CHRNA3-202ENST00000348639 GOLGA6L22H0YM25 854 aa24.54■■□□□ 1.52
CHRNA3-202ENST00000348639 PKP1Q13835 747 aa24.54■■□□□ 1.52
CHRNA3-202ENST00000348639 SKOR2Q2VWA4 1001 aaPredicted RBP24.54■■□□□ 1.52
CHRNA3-202ENST00000348639 DBNDD2Q9BQY9 259 aa24.54■■□□□ 1.52
CHRNA3-202ENST00000348639 NRAPQ86VF7 1730 aa24.54■■□□□ 1.52
CHRNA3-202ENST00000348639 MAP3K15Q6ZN16 1313 aa24.54■■□□□ 1.52
CHRNA3-202ENST00000348639 CYP19A1P11511 503 aaPredicted RBP24.54■■□□□ 1.52
CHRNA3-202ENST00000348639 TTC14Q96N46 770 aa24.54■■□□□ 1.52
CHRNA3-202ENST00000348639 NECTIN1Q15223 517 aa24.53■■□□□ 1.52
CHRNA3-202ENST00000348639 EYA2O00167 538 aa24.52■■□□□ 1.52
CHRNA3-202ENST00000348639 CIAO1O76071 339 aa24.52■■□□□ 1.52
CHRNA3-202ENST00000348639 PCCAP05165 728 aaPredicted RBP24.52■■□□□ 1.52
CHRNA3-202ENST00000348639 GIGYF2Q6Y7W6 1299 aaKnown RBP24.52■■□□□ 1.52
CHRNA3-202ENST00000348639 MAP4K1Q92918 833 aa24.52■■□□□ 1.52
CHRNA3-202ENST00000348639 ACSBG1Q96GR2 724 aa24.52■■□□□ 1.52
CHRNA3-202ENST00000348639 A0A0D9SFI3 127 aa24.52■■□□□ 1.52
CHRNA3-202ENST00000348639 NOL8Q76FK4 1167 aaKnown RBP24.52■■□□□ 1.52
CHRNA3-202ENST00000348639 HAUS7Q99871 368 aa24.52■■□□□ 1.52
CHRNA3-202ENST00000348639 DOT1LQ8TEK3 1739 aa24.52■■□□□ 1.52
CHRNA3-202ENST00000348639 RFX7Q2KHR2 1363 aa24.52■■□□□ 1.52
CHRNA3-202ENST00000348639 SPATA31A5Q5VU36 1347 aa24.51■■□□□ 1.51
CHRNA3-202ENST00000348639 SPATA31A7Q8IWB4 1347 aa24.51■■□□□ 1.51
CHRNA3-202ENST00000348639 PRPF40BQ6NWY9 871 aaKnown RBP24.51■■□□□ 1.51
CHRNA3-202ENST00000348639 PLA2G12BQ9BX93 195 aa24.51■■□□□ 1.51
CHRNA3-202ENST00000348639 TM6SF1Q9BZW5 370 aa24.51■■□□□ 1.51
CHRNA3-202ENST00000348639 ZBTB1Q9Y2K1 713 aa24.51■■□□□ 1.51
CHRNA3-202ENST00000348639 ZDHHC9Q9Y397 364 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms