RNA–Protein interactions for RNA: ENST00000344222.5

ZNF550-202, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 3,485 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-202ENST00000344222 UPF1Q92900 1129 aaKnown RBP eCLIP7.44□□□□□ -1.22
ZNF550-202ENST00000344222 EXOC4Q96A65 974 aa7.44□□□□□ -1.22
ZNF550-202ENST00000344222 TRERF1Q96PN7 1200 aa7.44□□□□□ -1.22
ZNF550-202ENST00000344222 TACO1Q9BSH4 297 aaKnown RBP7.44□□□□□ -1.22
ZNF550-202ENST00000344222 RYDENQ9NUL5 291 aaKnown RBP7.44□□□□□ -1.22
ZNF550-202ENST00000344222 NHSL1Q5SYE7 1610 aa7.44□□□□□ -1.22
ZNF550-202ENST00000344222 ABCC6O95255 1503 aa7.44□□□□□ -1.22
ZNF550-202ENST00000344222 TOPAZ1Q8N9V7 1692 aa7.43□□□□□ -1.22
ZNF550-202ENST00000344222 PDAP1Q13442 181 aaKnown RBP7.43□□□□□ -1.22
ZNF550-202ENST00000344222 ELP1O95163 1332 aa7.43□□□□□ -1.22
ZNF550-202ENST00000344222 CCDC196A0A1B0GTZ2 297 aa7.43□□□□□ -1.22
ZNF550-202ENST00000344222 CCZ1BP86790 482 aa7.43□□□□□ -1.22
ZNF550-202ENST00000344222 CCZ1P86791 482 aaPredicted RBP7.43□□□□□ -1.22
ZNF550-202ENST00000344222 FOXR1Q6PIV2 292 aa7.43□□□□□ -1.22
ZNF550-202ENST00000344222 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.43□□□□□ -1.22
ZNF550-202ENST00000344222 WDR63Q8IWG1 891 aa7.43□□□□□ -1.22
ZNF550-202ENST00000344222 SGIP1Q9BQI5 828 aa7.43□□□□□ -1.22
ZNF550-202ENST00000344222 ATP10DQ9P241 1426 aa7.43□□□□□ -1.22
ZNF550-202ENST00000344222 KDRP35968 1356 aa7.43□□□□□ -1.22
ZNF550-202ENST00000344222 GPR37O15354 613 aa7.43□□□□□ -1.22
ZNF550-202ENST00000344222 ONECUT3O60422 494 aaPredicted RBP7.43□□□□□ -1.22
ZNF550-202ENST00000344222 C1QTNF12Q5T7M4 302 aa7.43□□□□□ -1.22
ZNF550-202ENST00000344222 SIRT2Q8IXJ6 389 aa7.43□□□□□ -1.22
ZNF550-202ENST00000344222 C10orf67Q8IYJ2 551 aa7.43□□□□□ -1.22
ZNF550-202ENST00000344222 DDX27Q96GQ7 796 aaKnown RBP7.43□□□□□ -1.22
ZNF550-202ENST00000344222 TRPC6Q9Y210 931 aa7.43□□□□□ -1.22
ZNF550-202ENST00000344222 RGS12O14924 1447 aa7.43□□□□□ -1.22
ZNF550-202ENST00000344222 GRXCR2A6NFK2 248 aa7.42□□□□□ -1.22
ZNF550-202ENST00000344222 APAF1O14727 1248 aa7.42□□□□□ -1.22
ZNF550-202ENST00000344222 MX1P20591 662 aa7.42□□□□□ -1.22
ZNF550-202ENST00000344222 CCDC144BQ3MJ40 725 aa7.42□□□□□ -1.22
ZNF550-202ENST00000344222 MMS22LQ6ZRQ5 1243 aa7.42□□□□□ -1.22
ZNF550-202ENST00000344222 CCDC144CPQ8IYA2 1237 aa7.42□□□□□ -1.22
ZNF550-202ENST00000344222 V9GYY5 206 aaPredicted RBP7.42□□□□□ -1.22
ZNF550-202ENST00000344222 DDX60Q8IY21 1712 aaKnown RBP7.42□□□□□ -1.22
ZNF550-202ENST00000344222 ADGRL3Q9HAR2 1447 aa7.42□□□□□ -1.22
ZNF550-202ENST00000344222 TBC1D8BQ0IIM8 1120 aa7.42□□□□□ -1.22
ZNF550-202ENST00000344222 LRMPQ12912 555 aa7.42□□□□□ -1.22
ZNF550-202ENST00000344222 PLEKHO1Q53GL0 409 aaPredicted RBP7.42□□□□□ -1.22
ZNF550-202ENST00000344222 CHD1LQ86WJ1 897 aa7.42□□□□□ -1.22
ZNF550-202ENST00000344222 CCDC102AQ96A19 550 aa7.42□□□□□ -1.22
ZNF550-202ENST00000344222 MCM8Q9UJA3 840 aa7.42□□□□□ -1.22
ZNF550-202ENST00000344222 CHIC2Q9UKJ5 165 aa7.42□□□□□ -1.22
ZNF550-202ENST00000344222 H3BQF6 201 aa7.42□□□□□ -1.22
ZNF550-202ENST00000344222 PTGS1P23219 599 aa7.42□□□□□ -1.22
ZNF550-202ENST00000344222 DDR1Q08345 913 aa7.42□□□□□ -1.22
ZNF550-202ENST00000344222 CCDC183Q5T5S1 534 aa7.42□□□□□ -1.22
ZNF550-202ENST00000344222 CCDC91Q7Z6B0 441 aa7.42□□□□□ -1.22
ZNF550-202ENST00000344222 ANKRD23Q86SG2 305 aa7.42□□□□□ -1.22
ZNF550-202ENST00000344222 INTS4Q96HW7 963 aaKnown RBP7.42□□□□□ -1.22
ZNF550-202ENST00000344222 MTMR7Q9Y216 660 aa7.42□□□□□ -1.22
ZNF550-202ENST00000344222 NRKQ7Z2Y5 1582 aa7.41□□□□□ -1.22
ZNF550-202ENST00000344222 NALCNQ8IZF0 1738 aa7.41□□□□□ -1.22
ZNF550-202ENST00000344222 EIF3CLB5ME19 914 aaKnown RBP7.41□□□□□ -1.22
ZNF550-202ENST00000344222 MAP3K13O43283 966 aa7.41□□□□□ -1.22
ZNF550-202ENST00000344222 RAD21O60216 631 aa7.41□□□□□ -1.22
ZNF550-202ENST00000344222 CT47B1P0C2W7 299 aaPredicted RBP7.41□□□□□ -1.22
ZNF550-202ENST00000344222 TRIM27P14373 513 aa7.41□□□□□ -1.22
ZNF550-202ENST00000344222 SRPK2P78362 688 aaKnown RBP7.41□□□□□ -1.22
ZNF550-202ENST00000344222 RNF20Q5VTR2 975 aa7.41□□□□□ -1.22
ZNF550-202ENST00000344222 EIF3CQ99613 913 aaKnown RBP7.41□□□□□ -1.22
ZNF550-202ENST00000344222 SRRTQ9BXP5 876 aaKnown RBP7.41□□□□□ -1.22
ZNF550-202ENST00000344222 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.41□□□□□ -1.22
ZNF550-202ENST00000344222 LRRFIP2Q9Y608 721 aaKnown RBP7.41□□□□□ -1.22
ZNF550-202ENST00000344222 DLG5Q8TDM6 1919 aa7.41□□□□□ -1.22
ZNF550-202ENST00000344222 NPHP4O75161 1426 aaPredicted RBP7.41□□□□□ -1.22
ZNF550-202ENST00000344222 ACTN2P35609 894 aa7.41□□□□□ -1.22
ZNF550-202ENST00000344222 KCNJ6P48051 423 aa7.41□□□□□ -1.22
ZNF550-202ENST00000344222 CCDC191Q8NCU4 936 aa7.41□□□□□ -1.22
ZNF550-202ENST00000344222 CACTINQ8WUQ7 758 aaKnown RBP7.41□□□□□ -1.22
ZNF550-202ENST00000344222 DRC1Q96MC2 740 aa7.41□□□□□ -1.22
ZNF550-202ENST00000344222 TEX13AQ9BXU3 409 aaPredicted RBP7.41□□□□□ -1.22
ZNF550-202ENST00000344222 ORC3Q9UBD5 711 aaPredicted RBP7.41□□□□□ -1.22
ZNF550-202ENST00000344222 DIP2AQ14689 1571 aa7.41□□□□□ -1.22
ZNF550-202ENST00000344222 AKAP12Q02952 1782 aa7.41□□□□□ -1.22
ZNF550-202ENST00000344222 NRXN3Q9Y4C0 1643 aa7.4□□□□□ -1.22
ZNF550-202ENST00000344222 PATL2C9JE40 543 aaKnown RBP7.4□□□□□ -1.22
ZNF550-202ENST00000344222 HCLS1P14317 486 aaPredicted RBP7.4□□□□□ -1.22
ZNF550-202ENST00000344222 TTC31Q49AM3 519 aaPredicted RBP7.4□□□□□ -1.22
ZNF550-202ENST00000344222 GTF3C6Q969F1 213 aa7.4□□□□□ -1.22
ZNF550-202ENST00000344222 MIEF2Q96C03 454 aa7.4□□□□□ -1.22
ZNF550-202ENST00000344222 TMX3Q96JJ7 454 aa7.4□□□□□ -1.22
ZNF550-202ENST00000344222 FUT8Q9BYC5 575 aa7.4□□□□□ -1.22
ZNF550-202ENST00000344222 ADCY9O60503 1353 aa7.4□□□□□ -1.22
ZNF550-202ENST00000344222 KIF20BQ96Q89 1820 aa7.4□□□□□ -1.22
ZNF550-202ENST00000344222 TNNT1P13805 278 aa7.4□□□□□ -1.22
ZNF550-202ENST00000344222 WLSQ5T9L3 541 aa7.4□□□□□ -1.22
ZNF550-202ENST00000344222 FBXO31Q5XUX0 539 aaPredicted RBP7.4□□□□□ -1.22
ZNF550-202ENST00000344222 ATXN2Q99700 1313 aaKnown RBP7.4□□□□□ -1.22
ZNF550-202ENST00000344222 ABCC11Q96J66 1382 aa7.4□□□□□ -1.22
ZNF550-202ENST00000344222 MON2Q7Z3U7 1717 aa7.4□□□□□ -1.23
ZNF550-202ENST00000344222 GOLIM4O00461 696 aa7.4□□□□□ -1.23
ZNF550-202ENST00000344222 SARM1Q6SZW1 724 aa7.4□□□□□ -1.23
ZNF550-202ENST00000344222 USP48Q86UV5 1035 aa7.4□□□□□ -1.23
ZNF550-202ENST00000344222 NRBP1Q9UHY1 535 aa7.4□□□□□ -1.23
ZNF550-202ENST00000344222 CLSTN1O94985 981 aa7.39□□□□□ -1.23
ZNF550-202ENST00000344222 CEP135Q66GS9 1140 aa7.39□□□□□ -1.23
ZNF550-202ENST00000344222 TDRD7Q8NHU6 1098 aaKnown RBP7.39□□□□□ -1.23
ZNF550-202ENST00000344222 MRVI1Q9Y6F6 885 aa7.39□□□□□ -1.23
ZNF550-202ENST00000344222 CCDC171Q6TFL3 1326 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms