RNA–Protein interactions for RNA: ENST00000342690.4

RBM38-201, Transcript of RNA binding motif protein 38, humanhuman

TSL 3

Gene RBM38, Length 852 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM38-201ENST00000342690 PTPRCP08575 1304 aa27.92■■■□□ 2.06
RBM38-201ENST00000342690 BCAR3O75815 825 aa27.92■■■□□ 2.06
RBM38-201ENST00000342690 TNRC6CQ9HCJ0 1690 aaKnown RBP27.91■■■□□ 2.06
RBM38-201ENST00000342690 IGKV5-2P06315 115 aa27.91■■■□□ 2.06
RBM38-201ENST00000342690 ERFEQ4G0M1 354 aa27.91■■■□□ 2.06
RBM38-201ENST00000342690 GTF2E1P29083 439 aaPredicted RBP27.9■■■□□ 2.06
RBM38-201ENST00000342690 TGFB2P61812 414 aa27.9■■■□□ 2.06
RBM38-201ENST00000342690 NEXNQ0ZGT2 675 aa27.9■■■□□ 2.06
RBM38-201ENST00000342690 BRIP1Q9BX63 1249 aa27.9■■■□□ 2.06
RBM38-201ENST00000342690 COL11A2P13942 1736 aaPredicted RBP27.89■■■□□ 2.06
RBM38-201ENST00000342690 NOB1Q9ULX3 412 aaKnown RBP27.89■■■□□ 2.06
RBM38-201ENST00000342690 RNF123Q5XPI4 1314 aa27.89■■■□□ 2.05
RBM38-201ENST00000342690 IPO8O15397 1037 aaKnown RBP27.88■■■□□ 2.05
RBM38-201ENST00000342690 DPEP1P16444 411 aa27.88■■■□□ 2.05
RBM38-201ENST00000342690 CWF19L2Q2TBE0 894 aaKnown RBP27.88■■■□□ 2.05
RBM38-201ENST00000342690 RIC1Q4ADV7 1423 aa27.88■■■□□ 2.05
RBM38-201ENST00000342690 CCDC191Q8NCU4 936 aa27.88■■■□□ 2.05
RBM38-201ENST00000342690 FRAT1Q92837 279 aaPredicted RBP27.88■■■□□ 2.05
RBM38-201ENST00000342690 TRMT112Q9UI30 125 aaKnown RBP27.88■■■□□ 2.05
RBM38-201ENST00000342690 DLEC1Q9Y238 1755 aa27.88■■■□□ 2.05
RBM38-201ENST00000342690 A0A0G2JLW4 131 aa27.87■■■□□ 2.05
RBM38-201ENST00000342690 NEURL1BA8MQ27 555 aa27.87■■■□□ 2.05
RBM38-201ENST00000342690 CHRNA5P30532 468 aa27.87■■■□□ 2.05
RBM38-201ENST00000342690 CWC25Q9NXE8 425 aaPredicted RBP27.87■■■□□ 2.05
RBM38-201ENST00000342690 SH3TC1Q8TE82 1336 aa27.87■■■□□ 2.05
RBM38-201ENST00000342690 BEND3Q5T5X7 828 aa27.86■■■□□ 2.05
RBM38-201ENST00000342690 SYNE4Q8N205 404 aa27.86■■■□□ 2.05
RBM38-201ENST00000342690 LINS1Q8NG48 757 aa27.86■■■□□ 2.05
RBM38-201ENST00000342690 BRCA1P38398 1863 aaKnown RBP27.85■■■□□ 2.05
RBM38-201ENST00000342690 DDX60Q8IY21 1712 aaKnown RBP27.85■■■□□ 2.05
RBM38-201ENST00000342690 PDE6BP35913 854 aa27.85■■■□□ 2.05
RBM38-201ENST00000342690 ARHGAP45Q92619 1136 aa27.85■■■□□ 2.05
RBM38-201ENST00000342690 API5Q9BZZ5 524 aaKnown RBP27.85■■■□□ 2.05
RBM38-201ENST00000342690 LAMB2P55268 1798 aa27.84■■■□□ 2.05
RBM38-201ENST00000342690 KCNA3P22001 575 aa27.84■■■□□ 2.05
RBM38-201ENST00000342690 SLC4A10Q6U841 1118 aa27.84■■■□□ 2.05
RBM38-201ENST00000342690 C2CD5Q86YS7 1000 aa27.84■■■□□ 2.05
RBM38-201ENST00000342690 FAM89AQ96GI7 184 aa27.84■■■□□ 2.05
RBM38-201ENST00000342690 ZKSCAN2Q63HK3 967 aa27.83■■■□□ 2.05
RBM38-201ENST00000342690 ZBTB38Q8NAP3 1195 aaPredicted RBP27.83■■■□□ 2.05
RBM38-201ENST00000342690 PCCAP05165 728 aaPredicted RBP27.82■■■□□ 2.04
RBM38-201ENST00000342690 RTL5Q5HYW3 569 aaPredicted RBP27.82■■■□□ 2.04
RBM38-201ENST00000342690 SLC10A5Q5PT55 438 aa27.82■■■□□ 2.04
RBM38-201ENST00000342690 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.82■■■□□ 2.04
RBM38-201ENST00000342690 WWC3Q9ULE0 1092 aa27.82■■■□□ 2.04
RBM38-201ENST00000342690 KLRG2A4D1S0 409 aaPredicted RBP27.81■■■□□ 2.04
RBM38-201ENST00000342690 H0YIN7 160 aa27.81■■■□□ 2.04
RBM38-201ENST00000342690 HCLS1P14317 486 aaPredicted RBP27.81■■■□□ 2.04
RBM38-201ENST00000342690 GCKRQ14397 625 aa27.81■■■□□ 2.04
RBM38-201ENST00000342690 ATF7IPQ6VMQ6 1270 aa27.81■■■□□ 2.04
RBM38-201ENST00000342690 JARID2Q92833 1246 aaPredicted RBP27.81■■■□□ 2.04
RBM38-201ENST00000342690 PDZRN3Q9UPQ7 1066 aa27.81■■■□□ 2.04
RBM38-201ENST00000342690 C3orf67Q6ZVT6 689 aa27.8■■■□□ 2.04
RBM38-201ENST00000342690 CENPBP07199 599 aaPredicted RBP27.79■■■□□ 2.04
RBM38-201ENST00000342690 SRGNP10124 158 aa27.79■■■□□ 2.04
RBM38-201ENST00000342690 SRCIN1Q9C0H9 1055 aa27.79■■■□□ 2.04
RBM38-201ENST00000342690 IRS4O14654 1257 aaPredicted RBP27.78■■■□□ 2.04
RBM38-201ENST00000342690 ALDH1L1O75891 902 aa27.78■■■□□ 2.04
RBM38-201ENST00000342690 TRIM27P14373 513 aa27.77■■■□□ 2.04
RBM38-201ENST00000342690 CRY2Q49AN0 593 aa27.77■■■□□ 2.04
RBM38-201ENST00000342690 NLRP3Q96P20 1036 aa27.77■■■□□ 2.04
RBM38-201ENST00000342690 TNNQ9UQP3 1299 aa27.77■■■□□ 2.04
RBM38-201ENST00000342690 CDHR2Q9BYE9 1310 aa27.76■■■□□ 2.03
RBM38-201ENST00000342690 H7C1W4 665 aa27.76■■■□□ 2.03
RBM38-201ENST00000342690 PELP1Q8IZL8 1130 aaKnown RBP27.76■■■□□ 2.03
RBM38-201ENST00000342690 PIM2Q9P1W9 311 aa27.76■■■□□ 2.03
RBM38-201ENST00000342690 CACNA1SQ13698 1873 aa27.75■■■□□ 2.03
RBM38-201ENST00000342690 MS4A1P11836 297 aa27.75■■■□□ 2.03
RBM38-201ENST00000342690 STYK1Q6J9G0 422 aa27.75■■■□□ 2.03
RBM38-201ENST00000342690 UBE3BQ7Z3V4 1068 aa27.75■■■□□ 2.03
RBM38-201ENST00000342690 FTSJ3Q8IY81 847 aaKnown RBP27.75■■■□□ 2.03
RBM38-201ENST00000342690 ZNF622Q969S3 477 aaKnown RBP eCLIP27.75■■■□□ 2.03
RBM38-201ENST00000342690 MASTLQ96GX5 879 aa27.75■■■□□ 2.03
RBM38-201ENST00000342690 ABCC4O15439 1325 aa27.74■■■□□ 2.03
RBM38-201ENST00000342690 NPR1P16066 1061 aa27.74■■■□□ 2.03
RBM38-201ENST00000342690 YBX3P16989 372 aaKnown RBP eCLIP27.74■■■□□ 2.031e-7■□□□□ 8.2
RBM38-201ENST00000342690 CASP7P55210 303 aa27.74■■■□□ 2.03
RBM38-201ENST00000342690 CLUAP1Q96AJ1 413 aa27.73■■■□□ 2.03
RBM38-201ENST00000342690 BCS1LQ9Y276 419 aa27.73■■■□□ 2.03
RBM38-201ENST00000342690 ARFGEF1Q9Y6D6 1849 aa27.72■■■□□ 2.03
RBM38-201ENST00000342690 CCT4P50991 539 aaKnown RBP27.72■■■□□ 2.03
RBM38-201ENST00000342690 DZIP1LQ8IYY4 767 aaKnown RBP27.72■■■□□ 2.03
RBM38-201ENST00000342690 RPGRQ92834 1020 aaKnown RBP27.72■■■□□ 2.03
RBM38-201ENST00000342690 GRM8O00222 908 aa27.71■■■□□ 2.03
RBM38-201ENST00000342690 PLIN1O60240 522 aa27.71■■■□□ 2.03
RBM38-201ENST00000342690 RRP1P56182 461 aaKnown RBP27.71■■■□□ 2.03
RBM38-201ENST00000342690 GPR162Q16538 588 aa27.71■■■□□ 2.03
RBM38-201ENST00000342690 DALRD3Q5D0E6 543 aaKnown RBP27.71■■■□□ 2.03
RBM38-201ENST00000342690 TTLL6Q8N841 843 aa27.71■■■□□ 2.03
RBM38-201ENST00000342690 PDE8AO60658 829 aa27.7■■■□□ 2.02
RBM38-201ENST00000342690 HSP90B1P14625 803 aaKnown RBP27.7■■■□□ 2.02
RBM38-201ENST00000342690 CNKSR1Q969H4 720 aa27.7■■■□□ 2.02
RBM38-201ENST00000342690 C9orf78Q9NZ63 289 aaPredicted RBP27.7■■■□□ 2.02
RBM38-201ENST00000342690 MYH3P11055 1940 aa27.7■■■□□ 2.02
RBM38-201ENST00000342690 SLX4Q8IY92 1834 aa27.69■■■□□ 2.02
RBM38-201ENST00000342690 HOXA10P31260 410 aaPredicted RBP27.69■■■□□ 2.02
RBM38-201ENST00000342690 SF3B3Q15393 1217 aaKnown RBP27.69■■■□□ 2.02
RBM38-201ENST00000342690 RBM17Q96I25 401 aaKnown RBP27.68■■■□□ 2.02
RBM38-201ENST00000342690 UTYO14607 1347 aa27.67■■■□□ 2.02
RBM38-201ENST00000342690 INTS3Q68E01 1043 aaKnown RBP27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms