RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 NBPF5PQ86XG9 351 aaPredicted RBP17.52■□□□□ 0.39
COL11A2-201ENST00000341947 CKAP2LQ8IYA6 745 aa17.52■□□□□ 0.39
COL11A2-201ENST00000341947 NBPF4Q96M43 638 aa17.52■□□□□ 0.39
COL11A2-201ENST00000341947 SLC4A8Q2Y0W8 1093 aa17.52■□□□□ 0.39
COL11A2-201ENST00000341947 UBE4AQ14139 1066 aa17.51■□□□□ 0.39
COL11A2-201ENST00000341947 CCDC174Q6PII3 467 aa17.51■□□□□ 0.39
COL11A2-201ENST00000341947 SLC26A6Q9BXS9 759 aa17.51■□□□□ 0.39
COL11A2-201ENST00000341947 ERICH4A6NGS2 130 aa17.51■□□□□ 0.39
COL11A2-201ENST00000341947 SNRPA1P09661 255 aaKnown RBP17.51■□□□□ 0.39
COL11A2-201ENST00000341947 MICU3Q86XE3 530 aa17.51■□□□□ 0.39
COL11A2-201ENST00000341947 HMG20BQ9P0W2 317 aa17.51■□□□□ 0.39
COL11A2-201ENST00000341947 KIF14Q15058 1648 aa17.51■□□□□ 0.39
COL11A2-201ENST00000341947 CCDC184Q52MB2 194 aa17.51■□□□□ 0.39
COL11A2-201ENST00000341947 NSD2O96028 1365 aa17.51■□□□□ 0.39
COL11A2-201ENST00000341947 ERMNQ8TAM6 284 aa17.5■□□□□ 0.39
COL11A2-201ENST00000341947 ANKRD24Q8TF21 1146 aa17.5■□□□□ 0.39
COL11A2-201ENST00000341947 NEK1Q96PY6 1258 aa17.5■□□□□ 0.39
COL11A2-201ENST00000341947 ORC3Q9UBD5 711 aaPredicted RBP17.5■□□□□ 0.39
COL11A2-201ENST00000341947 NEMFO60524 1076 aa17.5■□□□□ 0.39
COL11A2-201ENST00000341947 GSDMDP57764 484 aa17.5■□□□□ 0.39
COL11A2-201ENST00000341947 HAND2P61296 217 aa17.5■□□□□ 0.39
COL11A2-201ENST00000341947 UBE3BQ7Z3V4 1068 aa17.5■□□□□ 0.39
COL11A2-201ENST00000341947 PPP4R3BQ5MIZ7 849 aa17.5■□□□□ 0.39
COL11A2-201ENST00000341947 HDAC9Q9UKV0 1011 aa17.5■□□□□ 0.39
COL11A2-201ENST00000341947 KIAA0586Q9BVV6 1533 aa17.5■□□□□ 0.39
COL11A2-201ENST00000341947 GRIPAP1Q4V328 841 aa17.49■□□□□ 0.39
COL11A2-201ENST00000341947 POTEB2H3BUK9 544 aa17.49■□□□□ 0.39
COL11A2-201ENST00000341947 PRPF4BQ13523 1007 aaKnown RBP17.49■□□□□ 0.39
COL11A2-201ENST00000341947 EXOC1Q9NV70 894 aa17.49■□□□□ 0.39
COL11A2-201ENST00000341947 TRAF1Q13077 416 aa17.49■□□□□ 0.39
COL11A2-201ENST00000341947 TMC6Q7Z403 805 aa17.49■□□□□ 0.39
COL11A2-201ENST00000341947 TSNARE1Q96NA8 513 aa17.49■□□□□ 0.39
COL11A2-201ENST00000341947 TSPY3P0CV98 308 aa17.49■□□□□ 0.39
COL11A2-201ENST00000341947 TSPY8P0CW00 308 aa17.49■□□□□ 0.39
COL11A2-201ENST00000341947 NOP2P46087 812 aaKnown RBP17.49■□□□□ 0.39
COL11A2-201ENST00000341947 HLTFQ14527 1009 aaKnown RBP eCLIP17.49■□□□□ 0.39
COL11A2-201ENST00000341947 TMX1Q9H3N1 280 aa17.49■□□□□ 0.39
COL11A2-201ENST00000341947 BIN1O00499 593 aa17.48■□□□□ 0.39
COL11A2-201ENST00000341947 GIGYF2Q6Y7W6 1299 aaKnown RBP17.48■□□□□ 0.39
COL11A2-201ENST00000341947 ZGPATQ8N5A5 531 aaKnown RBP17.48■□□□□ 0.39
COL11A2-201ENST00000341947 SPECC1Q5M775 1068 aa17.48■□□□□ 0.39
COL11A2-201ENST00000341947 CCDC172P0C7W6 258 aa17.48■□□□□ 0.39
COL11A2-201ENST00000341947 RMND1Q9NWS8 449 aa17.48■□□□□ 0.39
COL11A2-201ENST00000341947 LARP6Q9BRS8 491 aaKnown RBP17.48■□□□□ 0.39
COL11A2-201ENST00000341947 KRT23Q9C075 422 aa17.48■□□□□ 0.39
COL11A2-201ENST00000341947 HOMER2Q9NSB8 354 aa17.47■□□□□ 0.39
COL11A2-201ENST00000341947 TOP2BQ02880 1626 aa17.47■□□□□ 0.39
COL11A2-201ENST00000341947 STX6O43752 255 aa17.47■□□□□ 0.39
COL11A2-201ENST00000341947 SSFA2P28290 1259 aa17.47■□□□□ 0.39
COL11A2-201ENST00000341947 ACTN2P35609 894 aa17.47■□□□□ 0.39
COL11A2-201ENST00000341947 FBXO31Q5XUX0 539 aaPredicted RBP17.47■□□□□ 0.39
COL11A2-201ENST00000341947 FSD2A1L4K1 749 aa17.47■□□□□ 0.39
COL11A2-201ENST00000341947 LMAN1P49257 510 aa17.47■□□□□ 0.39
COL11A2-201ENST00000341947 WTAPQ15007 396 aa17.47■□□□□ 0.39
COL11A2-201ENST00000341947 IFI16Q16666 785 aaKnown RBP17.47■□□□□ 0.39
COL11A2-201ENST00000341947 CCDC102BQ68D86 513 aa17.47■□□□□ 0.39
COL11A2-201ENST00000341947 WDR97A6NE52 1622 aa17.47■□□□□ 0.39
COL11A2-201ENST00000341947 MCM5P33992 734 aa17.47■□□□□ 0.39
COL11A2-201ENST00000341947 PANK2Q9BZ23 570 aa17.47■□□□□ 0.39
COL11A2-201ENST00000341947 NCOA1Q15788 1441 aa17.46■□□□□ 0.39
COL11A2-201ENST00000341947 DNMBPQ6XZF7 1577 aa17.46■□□□□ 0.39
COL11A2-201ENST00000341947 NBPF7P0C2Y1 421 aaPredicted RBP17.46■□□□□ 0.39
COL11A2-201ENST00000341947 TRIM27P14373 513 aa17.46■□□□□ 0.39
COL11A2-201ENST00000341947 USP37Q86T82 979 aa17.46■□□□□ 0.39
COL11A2-201ENST00000341947 TBC1D5Q92609 795 aa17.46■□□□□ 0.39
COL11A2-201ENST00000341947 CA8P35219 290 aa17.46■□□□□ 0.39
COL11A2-201ENST00000341947 MICALCLQ6ZW33 695 aa17.46■□□□□ 0.39
COL11A2-201ENST00000341947 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.46■□□□□ 0.397e-7■■■■■ 52.8
COL11A2-201ENST00000341947 PI4KAP2A4QPH2 592 aa17.46■□□□□ 0.39
COL11A2-201ENST00000341947 RAB11FIP4Q86YS3 637 aa17.46■□□□□ 0.39
COL11A2-201ENST00000341947 PI4KAP1Q8N8J0 262 aa17.46■□□□□ 0.39
COL11A2-201ENST00000341947 MMRN2Q9H8L6 949 aa17.46■□□□□ 0.39
COL11A2-201ENST00000341947 SSX2IPQ9Y2D8 614 aa17.46■□□□□ 0.39
COL11A2-201ENST00000341947 ADGRF5Q8IZF2 1346 aa17.46■□□□□ 0.39
COL11A2-201ENST00000341947 GOLGA6L9A6NEM1 432 aa17.46■□□□□ 0.39
COL11A2-201ENST00000341947 PPM1EQ8WY54 764 aa17.46■□□□□ 0.39
COL11A2-201ENST00000341947 TRIM47Q96LD4 638 aa17.46■□□□□ 0.39
COL11A2-201ENST00000341947 PSMD1Q99460 953 aa17.46■□□□□ 0.39
COL11A2-201ENST00000341947 UTP14AQ9BVJ6 771 aaKnown RBP17.46■□□□□ 0.39
COL11A2-201ENST00000341947 TFIP11Q9UBB9 837 aaKnown RBP17.46■□□□□ 0.39
COL11A2-201ENST00000341947 CEBPAP49715 358 aaPredicted RBP17.46■□□□□ 0.38
COL11A2-201ENST00000341947 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.46■□□□□ 0.38
COL11A2-201ENST00000341947 STX8Q9UNK0 236 aa17.46■□□□□ 0.38
COL11A2-201ENST00000341947 PRXQ9BXM0 1461 aa17.45■□□□□ 0.38
COL11A2-201ENST00000341947 FERP16591 822 aa17.45■□□□□ 0.38
COL11A2-201ENST00000341947 CADPS2Q86UW7 1296 aa17.45■□□□□ 0.38
COL11A2-201ENST00000341947 CEP63Q96MT8 703 aa17.45■□□□□ 0.38
COL11A2-201ENST00000341947 TRMT1Q9NXH9 659 aaKnown RBP17.45■□□□□ 0.38
COL11A2-201ENST00000341947 IQGAP2Q13576 1575 aa17.45■□□□□ 0.38
COL11A2-201ENST00000341947 LRRC45Q96CN5 670 aa17.45■□□□□ 0.38
COL11A2-201ENST00000341947 SYNCQ9H7C4 482 aa17.45■□□□□ 0.38
COL11A2-201ENST00000341947 SETDB2Q96T68 719 aa17.45■□□□□ 0.38
COL11A2-201ENST00000341947 IFIT1BQ5T764 474 aaKnown RBP17.45■□□□□ 0.38
COL11A2-201ENST00000341947 ANKRD13DQ6ZTN6 518 aa17.45■□□□□ 0.38
COL11A2-201ENST00000341947 CGNQ9P2M7 1197 aaKnown RBP17.45■□□□□ 0.38
COL11A2-201ENST00000341947 CCDC175P0C221 793 aa17.44■□□□□ 0.38
COL11A2-201ENST00000341947 CYP7A1P22680 504 aa17.44■□□□□ 0.38
COL11A2-201ENST00000341947 MBIPQ9NS73 344 aa17.44■□□□□ 0.38
COL11A2-201ENST00000341947 IL27Q8NEV9 243 aa17.44■□□□□ 0.38
COL11A2-201ENST00000341947 USP25Q9UHP3 1055 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms