RNA–Protein interactions for RNA: ENST00000341290.6

PERM1-201, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PERM1, Length 3,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-201ENST00000341290 FAM173BQ6P4H8 233 aa18.28■□□□□ 0.52
PERM1-201ENST00000341290 MCM5P33992 734 aa18.28■□□□□ 0.52
PERM1-201ENST00000341290 MPRIPQ6WCQ1 1025 aa18.28■□□□□ 0.52
PERM1-201ENST00000341290 BEND3Q5T5X7 828 aa18.27■□□□□ 0.52
PERM1-201ENST00000341290 ARHGEF25Q86VW2 580 aa18.27■□□□□ 0.52
PERM1-201ENST00000341290 BBXQ8WY36 941 aaPredicted RBP18.27■□□□□ 0.52
PERM1-201ENST00000341290 PDRG1Q9NUG6 133 aa18.27■□□□□ 0.51
PERM1-201ENST00000341290 CWF19L2Q2TBE0 894 aaKnown RBP18.26■□□□□ 0.51
PERM1-201ENST00000341290 SASS6Q6UVJ0 657 aa18.26■□□□□ 0.51
PERM1-201ENST00000341290 SPC24Q8NBT2 197 aa18.26■□□□□ 0.51
PERM1-201ENST00000341290 HYPKQ9NX55 129 aa18.26■□□□□ 0.51
PERM1-201ENST00000341290 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.26■□□□□ 0.51
PERM1-201ENST00000341290 TUBGCP6Q96RT7 1819 aa18.26■□□□□ 0.51
PERM1-201ENST00000341290 AOX1Q06278 1338 aa18.26■□□□□ 0.51
PERM1-201ENST00000341290 KCNJ4P48050 445 aa18.26■□□□□ 0.51
PERM1-201ENST00000341290 EIF4A1P60842 406 aaKnown RBP18.26■□□□□ 0.51
PERM1-201ENST00000341290 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.26■□□□□ 0.51
PERM1-201ENST00000341290 PRAMEF22A3QJZ6 481 aa18.25■□□□□ 0.51
PERM1-201ENST00000341290 UBE2HP62256 183 aa18.25■□□□□ 0.51
PERM1-201ENST00000341290 NBPF6Q5VWK0 638 aa18.25■□□□□ 0.51
PERM1-201ENST00000341290 NBPF4Q96M43 638 aa18.25■□□□□ 0.51
PERM1-201ENST00000341290 C9orf78Q9NZ63 289 aaPredicted RBP18.25■□□□□ 0.51
PERM1-201ENST00000341290 SPATA31A6Q5VVP1 1343 aa18.25■□□□□ 0.51
PERM1-201ENST00000341290 GCP02774 474 aa18.25■□□□□ 0.51
PERM1-201ENST00000341290 TERF1P54274 439 aa18.25■□□□□ 0.51
PERM1-201ENST00000341290 PROSER3Q2NL68 480 aa18.25■□□□□ 0.51
PERM1-201ENST00000341290 CAMK4Q16566 473 aa18.25■□□□□ 0.51
PERM1-201ENST00000341290 CLASRPQ8N2M8 674 aaKnown RBP18.24■□□□□ 0.51
PERM1-201ENST00000341290 FAM227BQ96M60 508 aa18.24■□□□□ 0.51
PERM1-201ENST00000341290 AP5Z1O43299 807 aa18.24■□□□□ 0.51
PERM1-201ENST00000341290 SIL1Q9H173 461 aa18.24■□□□□ 0.51
PERM1-201ENST00000341290 IFIT2P09913 472 aaKnown RBP18.23■□□□□ 0.51
PERM1-201ENST00000341290 AIMP1Q12904 312 aaKnown RBP18.23■□□□□ 0.51
PERM1-201ENST00000341290 ME3Q16798 604 aa18.23■□□□□ 0.51
PERM1-201ENST00000341290 AACSQ86V21 672 aa18.23■□□□□ 0.51
PERM1-201ENST00000341290 CCDC8Q9H0W5 538 aaPredicted RBP18.23■□□□□ 0.51
PERM1-201ENST00000341290 MAP3K2Q9Y2U5 619 aa18.23■□□□□ 0.51
PERM1-201ENST00000341290 BTBD11A6QL63 1104 aa18.23■□□□□ 0.51
PERM1-201ENST00000341290 NOLC1Q14978 699 aaKnown RBP eCLIP18.23■□□□□ 0.51
PERM1-201ENST00000341290 MTMR6Q9Y217 621 aa18.23■□□□□ 0.51
PERM1-201ENST00000341290 N4BP2Q86UW6 1770 aaPredicted RBP18.23■□□□□ 0.51
PERM1-201ENST00000341290 PKD1L3Q7Z443 1732 aa18.23■□□□□ 0.51
PERM1-201ENST00000341290 CACNA1FO60840 1977 aa18.23■□□□□ 0.51
PERM1-201ENST00000341290 GLRX3O76003 335 aaKnown RBP18.23■□□□□ 0.51
PERM1-201ENST00000341290 TEFQ10587 303 aa18.23■□□□□ 0.51
PERM1-201ENST00000341290 ST3GAL1Q11201 340 aa18.22■□□□□ 0.51
PERM1-201ENST00000341290 IP6K1Q92551 441 aa18.22■□□□□ 0.51
PERM1-201ENST00000341290 IL17RAQ96F46 866 aa18.22■□□□□ 0.51
PERM1-201ENST00000341290 BCL11BQ9C0K0 894 aaPredicted RBP18.22■□□□□ 0.51
PERM1-201ENST00000341290 SLIT2O94813 1529 aa18.22■□□□□ 0.51
PERM1-201ENST00000341290 TMEM87AQ8NBN3 555 aa18.22■□□□□ 0.51
PERM1-201ENST00000341290 CYP46A1Q9Y6A2 500 aa18.22■□□□□ 0.51
PERM1-201ENST00000341290 STK3Q13188 491 aa18.21■□□□□ 0.51
PERM1-201ENST00000341290 FAM184AQ8NB25 1140 aa18.21■□□□□ 0.51
PERM1-201ENST00000341290 KLHDC4Q8TBB5 520 aa18.21■□□□□ 0.51
PERM1-201ENST00000341290 TAF6LQ9Y6J9 622 aa18.21■□□□□ 0.51
PERM1-201ENST00000341290 PARP4Q9UKK3 1724 aaKnown RBP18.21■□□□□ 0.51
PERM1-201ENST00000341290 LRP6O75581 1613 aa18.21■□□□□ 0.51
PERM1-201ENST00000341290 FBXO41Q8TF61 875 aa18.21■□□□□ 0.51
PERM1-201ENST00000341290 TPCN1Q9ULQ1 816 aa18.21■□□□□ 0.51
PERM1-201ENST00000341290 DYNC1I1O14576 645 aa18.2■□□□□ 0.5
PERM1-201ENST00000341290 KDM4AO75164 1064 aa18.2■□□□□ 0.5
PERM1-201ENST00000341290 ECHDC1Q9NTX5 307 aa18.2■□□□□ 0.5
PERM1-201ENST00000341290 TLR7Q9NYK1 1049 aaKnown RBP18.2■□□□□ 0.5
PERM1-201ENST00000341290 ZNF530Q6P9A1 599 aaPredicted RBP18.2■□□□□ 0.5
PERM1-201ENST00000341290 RBM8AQ9Y5S9 174 aaKnown RBP18.2■□□□□ 0.5
PERM1-201ENST00000341290 ADCY9O60503 1353 aa18.2■□□□□ 0.5
PERM1-201ENST00000341290 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.2■□□□□ 0.5
PERM1-201ENST00000341290 BOLA2Q9H3K6 86 aa18.2■□□□□ 0.5
PERM1-201ENST00000341290 LARP1BQ659C4 914 aaKnown RBP18.19■□□□□ 0.5
PERM1-201ENST00000341290 PIBF1Q8WXW3 757 aa18.19■□□□□ 0.5
PERM1-201ENST00000341290 TFIP11Q9UBB9 837 aaKnown RBP18.19■□□□□ 0.5
PERM1-201ENST00000341290 ATP6V1DQ9Y5K8 247 aa18.19■□□□□ 0.5
PERM1-201ENST00000341290 COL5A2P05997 1499 aaPredicted RBP18.19■□□□□ 0.5
PERM1-201ENST00000341290 CDC37L1Q7L3B6 337 aa18.19■□□□□ 0.5
PERM1-201ENST00000341290 CKAP2LQ8IYA6 745 aa18.19■□□□□ 0.5
PERM1-201ENST00000341290 RUFY2Q8WXA3 655 aa18.19■□□□□ 0.5
PERM1-201ENST00000341290 ADAMTS7Q9UKP4 1686 aa18.18■□□□□ 0.5
PERM1-201ENST00000341290 NMIQ13287 307 aaPredicted RBP18.18■□□□□ 0.5
PERM1-201ENST00000341290 UVSSAQ2YD98 709 aa18.18■□□□□ 0.5
PERM1-201ENST00000341290 HSP90AB4PQ58FF6 505 aa18.18■□□□□ 0.5
PERM1-201ENST00000341290 PIP4K2BP78356 416 aa18.18■□□□□ 0.5
PERM1-201ENST00000341290 DMTNQ08495 405 aa18.18■□□□□ 0.5
PERM1-201ENST00000341290 EDC3Q96F86 508 aaKnown RBP18.18■□□□□ 0.5
PERM1-201ENST00000341290 NDUFB9Q9Y6M9 179 aa18.18■□□□□ 0.5
PERM1-201ENST00000341290 SHANK3Q9BYB0 1731 aa18.17■□□□□ 0.5
PERM1-201ENST00000341290 ZKSCAN1P17029 563 aaPredicted RBP18.17■□□□□ 0.5
PERM1-201ENST00000341290 VPS53Q5VIR6 699 aa18.17■□□□□ 0.5
PERM1-201ENST00000341290 LMOD2Q6P5Q4 547 aa18.17■□□□□ 0.5
PERM1-201ENST00000341290 BABAM1Q9NWV8 329 aa18.17■□□□□ 0.5
PERM1-201ENST00000341290 CBX1P83916 185 aa18.17■□□□□ 0.5
PERM1-201ENST00000341290 CREB3L3Q68CJ9 461 aa18.17■□□□□ 0.5
PERM1-201ENST00000341290 ZSWIM6Q9HCJ5 1215 aa18.17■□□□□ 0.5
PERM1-201ENST00000341290 PYCARDQ9ULZ3 195 aa18.17■□□□□ 0.5
PERM1-201ENST00000341290 LIG1P18858 919 aa18.17■□□□□ 0.5
PERM1-201ENST00000341290 TTC6Q86TZ1 520 aa18.17■□□□□ 0.5
PERM1-201ENST00000341290 EAF2Q96CJ1 260 aaPredicted RBP18.17■□□□□ 0.5
PERM1-201ENST00000341290 CCDC9Q9Y3X0 531 aaKnown RBP18.17■□□□□ 0.5
PERM1-201ENST00000341290 PXDNLA1KZ92 1463 aa18.17■□□□□ 0.5
PERM1-201ENST00000341290 TTC41PQ6P2S7 1318 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms