RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 DPEP1P16444 411 aa16.83■□□□□ 0.28
TUBD1-202ENST00000340993 DNAAF4Q8WXU2 420 aa16.83■□□□□ 0.28
TUBD1-202ENST00000340993 FAM89AQ96GI7 184 aa16.83■□□□□ 0.28
TUBD1-202ENST00000340993 METTL22Q9BUU2 404 aaPredicted RBP16.83■□□□□ 0.28
TUBD1-202ENST00000340993 UTP14AQ9BVJ6 771 aaKnown RBP16.83■□□□□ 0.28
TUBD1-202ENST00000340993 NTSR2O95665 410 aa16.82■□□□□ 0.28
TUBD1-202ENST00000340993 HCLS1P14317 486 aaPredicted RBP16.82■□□□□ 0.28
TUBD1-202ENST00000340993 TPTE2Q6XPS3 522 aa16.82■□□□□ 0.28
TUBD1-202ENST00000340993 TNNQ9UQP3 1299 aa16.82■□□□□ 0.28
TUBD1-202ENST00000340993 IGKV5-2P06315 115 aa16.82■□□□□ 0.28
TUBD1-202ENST00000340993 NEXNQ0ZGT2 675 aa16.82■□□□□ 0.28
TUBD1-202ENST00000340993 PPP1R42Q7Z4L9 355 aa16.82■□□□□ 0.28
TUBD1-202ENST00000340993 KIAA1551Q9HCM1 1747 aa16.81■□□□□ 0.28
TUBD1-202ENST00000340993 PXDNLA1KZ92 1463 aa16.81■□□□□ 0.28
TUBD1-202ENST00000340993 ALDH1L2Q3SY69 923 aa16.81■□□□□ 0.28
TUBD1-202ENST00000340993 C3orf67Q6ZVT6 689 aa16.81■□□□□ 0.28
TUBD1-202ENST00000340993 C2CD5Q86YS7 1000 aa16.81■□□□□ 0.28
TUBD1-202ENST00000340993 ISCA1Q9BUE6 129 aa16.81■□□□□ 0.28
TUBD1-202ENST00000340993 ZNF219Q9P2Y4 722 aaPredicted RBP16.81■□□□□ 0.28
TUBD1-202ENST00000340993 CD2APQ9Y5K6 639 aa16.81■□□□□ 0.28
TUBD1-202ENST00000340993 PARP10Q53GL7 1025 aa16.8■□□□□ 0.28
TUBD1-202ENST00000340993 ZNF622Q969S3 477 aaKnown RBP eCLIP16.8■□□□□ 0.28
TUBD1-202ENST00000340993 NYXQ9GZU5 481 aa16.8■□□□□ 0.28
TUBD1-202ENST00000340993 CT47B1P0C2W7 299 aaPredicted RBP16.79■□□□□ 0.28
TUBD1-202ENST00000340993 CLUAP1Q96AJ1 413 aa16.79■□□□□ 0.28
TUBD1-202ENST00000340993 CCDC85AQ96PX6 553 aaPredicted RBP16.79■□□□□ 0.28
TUBD1-202ENST00000340993 CWC25Q9NXE8 425 aaPredicted RBP16.79■□□□□ 0.28
TUBD1-202ENST00000340993 TAF1P21675 1872 aa16.79■□□□□ 0.28
TUBD1-202ENST00000340993 LAMB2P55268 1798 aa16.78■□□□□ 0.28
TUBD1-202ENST00000340993 NEURL1BA8MQ27 555 aa16.78■□□□□ 0.28
TUBD1-202ENST00000340993 GPR162Q16538 588 aa16.78■□□□□ 0.28
TUBD1-202ENST00000340993 DDX60Q8IY21 1712 aaKnown RBP16.78■□□□□ 0.28
TUBD1-202ENST00000340993 BRIP1Q9BX63 1249 aa16.77■□□□□ 0.28
TUBD1-202ENST00000340993 BCS1LQ9Y276 419 aa16.77■□□□□ 0.28
TUBD1-202ENST00000340993 SH3TC1Q8TE82 1336 aa16.77■□□□□ 0.27
TUBD1-202ENST00000340993 UBE3BQ7Z3V4 1068 aa16.77■□□□□ 0.27
TUBD1-202ENST00000340993 BRCA1P38398 1863 aaKnown RBP16.76■□□□□ 0.27
TUBD1-202ENST00000340993 H0YIN7 160 aa16.76■□□□□ 0.27
TUBD1-202ENST00000340993 RGL2O15211 777 aa16.76■□□□□ 0.27
TUBD1-202ENST00000340993 PLIN1O60240 522 aa16.76■□□□□ 0.27
TUBD1-202ENST00000340993 PDE6BP35913 854 aa16.76■□□□□ 0.27
TUBD1-202ENST00000340993 BEND3Q5T5X7 828 aa16.76■□□□□ 0.27
TUBD1-202ENST00000340993 SLC51AQ86UW1 340 aa16.76■□□□□ 0.27
TUBD1-202ENST00000340993 PTPRCP08575 1304 aa16.75■□□□□ 0.27
TUBD1-202ENST00000340993 IRS4O14654 1257 aaPredicted RBP16.75■□□□□ 0.27
TUBD1-202ENST00000340993 YBX3P16989 372 aaKnown RBP eCLIP16.75■□□□□ 0.27
TUBD1-202ENST00000340993 KCNA3P22001 575 aa16.75■□□□□ 0.27
TUBD1-202ENST00000340993 CCDC191Q8NCU4 936 aa16.75■□□□□ 0.27
TUBD1-202ENST00000340993 RCAN3Q9UKA8 241 aa16.75■□□□□ 0.27
TUBD1-202ENST00000340993 TGFB2P61812 414 aa16.74■□□□□ 0.27
TUBD1-202ENST00000340993 LINS1Q8NG48 757 aa16.74■□□□□ 0.27
TUBD1-202ENST00000340993 SRCIN1Q9C0H9 1055 aa16.74■□□□□ 0.27
TUBD1-202ENST00000340993 DLEC1Q9Y238 1755 aa16.74■□□□□ 0.27
TUBD1-202ENST00000340993 KIF16BQ96L93 1317 aa16.74■□□□□ 0.27
TUBD1-202ENST00000340993 GCKRQ14397 625 aa16.74■□□□□ 0.27
TUBD1-202ENST00000340993 ZBTB38Q8NAP3 1195 aaPredicted RBP16.74■□□□□ 0.27
TUBD1-202ENST00000340993 SLX4Q8IY92 1834 aa16.74■□□□□ 0.27
TUBD1-202ENST00000340993 TRIM27P14373 513 aa16.73■□□□□ 0.27
TUBD1-202ENST00000340993 RPGRQ92834 1020 aaKnown RBP16.73■□□□□ 0.27
TUBD1-202ENST00000340993 IBTKQ9P2D0 1353 aaPredicted RBP16.73■□□□□ 0.27
TUBD1-202ENST00000340993 MYH3P11055 1940 aa16.72■□□□□ 0.27
TUBD1-202ENST00000340993 TRIM28Q13263 835 aaKnown RBP16.72■□□□□ 0.27
TUBD1-202ENST00000340993 OLFM4Q6UX06 510 aa16.72■□□□□ 0.27
TUBD1-202ENST00000340993 NLRP3Q96P20 1036 aa16.72■□□□□ 0.27
TUBD1-202ENST00000340993 C9orf78Q9NZ63 289 aaPredicted RBP16.72■□□□□ 0.27
TUBD1-202ENST00000340993 PIM2Q9P1W9 311 aa16.72■□□□□ 0.27
TUBD1-202ENST00000340993 SPEF2Q9C093 1822 aa16.72■□□□□ 0.27
TUBD1-202ENST00000340993 PCCAP05165 728 aaPredicted RBP16.72■□□□□ 0.27
TUBD1-202ENST00000340993 SRGNP10124 158 aa16.72■□□□□ 0.27
TUBD1-202ENST00000340993 API5Q9BZZ5 524 aaKnown RBP16.72■□□□□ 0.27
TUBD1-202ENST00000340993 DALRD3Q5D0E6 543 aaKnown RBP16.71■□□□□ 0.27
TUBD1-202ENST00000340993 ZKSCAN2Q63HK3 967 aa16.71■□□□□ 0.27
TUBD1-202ENST00000340993 ATF7IPQ6VMQ6 1270 aa16.71■□□□□ 0.27
TUBD1-202ENST00000340993 CHMP3Q9Y3E7 222 aa16.71■□□□□ 0.27
TUBD1-202ENST00000340993 COL4A1P02462 1669 aa16.7■□□□□ 0.26
TUBD1-202ENST00000340993 FTSJ3Q8IY81 847 aaKnown RBP16.7■□□□□ 0.26
TUBD1-202ENST00000340993 MASTLQ96GX5 879 aa16.7■□□□□ 0.26
TUBD1-202ENST00000340993 IPO8O15397 1037 aaKnown RBP16.69■□□□□ 0.26
TUBD1-202ENST00000340993 C21orf2O43822 256 aa16.69■□□□□ 0.26
TUBD1-202ENST00000340993 PRPF40BQ6NWY9 871 aaKnown RBP16.69■□□□□ 0.26
TUBD1-202ENST00000340993 TTLL6Q8N841 843 aa16.69■□□□□ 0.26
TUBD1-202ENST00000340993 DCAF8L1A6NGE4 600 aa16.69■□□□□ 0.26
TUBD1-202ENST00000340993 GRM8O00222 908 aa16.69■□□□□ 0.26
TUBD1-202ENST00000340993 NBPF7P0C2Y1 421 aaPredicted RBP16.69■□□□□ 0.26
TUBD1-202ENST00000340993 RLBP1P12271 317 aa16.69■□□□□ 0.26
TUBD1-202ENST00000340993 NPR1P16066 1061 aa16.69■□□□□ 0.26
TUBD1-202ENST00000340993 PANK1Q8TE04 598 aa16.69■□□□□ 0.26
TUBD1-202ENST00000340993 H7C1W4 665 aa16.68■□□□□ 0.26
TUBD1-202ENST00000340993 BRPF1P55201 1214 aaPredicted RBP16.68■□□□□ 0.26
TUBD1-202ENST00000340993 TMEM57Q8N5G2 664 aa16.68■□□□□ 0.26
TUBD1-202ENST00000340993 SEC31BQ9NQW1 1179 aa16.68■□□□□ 0.26
TUBD1-202ENST00000340993 ABCC4O15439 1325 aa16.68■□□□□ 0.26
TUBD1-202ENST00000340993 SLC10A5Q5PT55 438 aa16.67■□□□□ 0.26
TUBD1-202ENST00000340993 RBM17Q96I25 401 aaKnown RBP16.67■□□□□ 0.26
TUBD1-202ENST00000340993 SUCLG2Q96I99 432 aa16.67■□□□□ 0.26
TUBD1-202ENST00000340993 RNF123Q5XPI4 1314 aa16.67■□□□□ 0.26
TUBD1-202ENST00000340993 ARFGEF1Q9Y6D6 1849 aa16.67■□□□□ 0.26
TUBD1-202ENST00000340993 PDE8AO60658 829 aa16.66■□□□□ 0.26
TUBD1-202ENST00000340993 ALDH1L1O75891 902 aa16.66■□□□□ 0.26
TUBD1-202ENST00000340993 CRY2Q49AN0 593 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms