RNA–Protein interactions for RNA: ENST00000340635.10

PDE4D-203, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 8,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-203ENST00000340635 TACC3Q9Y6A5 838 aa15.83■□□□□ 0.12
PDE4D-203ENST00000340635 OPA1O60313 960 aa15.83■□□□□ 0.12
PDE4D-203ENST00000340635 DPH6Q7L8W6 267 aa15.83■□□□□ 0.12
PDE4D-203ENST00000340635 CCDC89Q8N998 374 aa15.83■□□□□ 0.12
PDE4D-203ENST00000340635 GJC1P36383 396 aa15.83■□□□□ 0.12
PDE4D-203ENST00000340635 RNF41Q9H4P4 317 aaPredicted RBP15.83■□□□□ 0.12
PDE4D-203ENST00000340635 CACYBPQ9HB71 228 aaKnown RBP15.83■□□□□ 0.12
PDE4D-203ENST00000340635 PAXBP1Q9Y5B6 917 aa15.83■□□□□ 0.12
PDE4D-203ENST00000340635 CUL4BQ13620 913 aa15.83■□□□□ 0.12
PDE4D-203ENST00000340635 NBPF1Q3BBV0 1214 aa15.83■□□□□ 0.12
PDE4D-203ENST00000340635 MRVI1Q9Y6F6 885 aa15.82■□□□□ 0.12
PDE4D-203ENST00000340635 SWAP70Q9UH65 585 aa15.82■□□□□ 0.12
PDE4D-203ENST00000340635 VPS52Q8N1B4 723 aa15.82■□□□□ 0.12
PDE4D-203ENST00000340635 RPGRQ92834 1020 aaKnown RBP15.82■□□□□ 0.12
PDE4D-203ENST00000340635 SEC62Q99442 399 aaKnown RBP15.82■□□□□ 0.12
PDE4D-203ENST00000340635 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.82■□□□□ 0.12
PDE4D-203ENST00000340635 KANK3Q6NY19 840 aa15.82■□□□□ 0.12
PDE4D-203ENST00000340635 IMPG2Q9BZV3 1241 aa15.82■□□□□ 0.12
PDE4D-203ENST00000340635 TMEM110-MUSTN1A8MSY1 372 aa15.82■□□□□ 0.12
PDE4D-203ENST00000340635 ERCC5P28715 1186 aaPredicted RBP15.82■□□□□ 0.12
PDE4D-203ENST00000340635 NCBP1Q09161 790 aaKnown RBP15.82■□□□□ 0.12
PDE4D-203ENST00000340635 RSRC1Q96IZ7 334 aaKnown RBP15.81■□□□□ 0.12
PDE4D-203ENST00000340635 ZNF213O14771 459 aa15.81■□□□□ 0.12
PDE4D-203ENST00000340635 KRT222Q8N1A0 295 aa15.81■□□□□ 0.12
PDE4D-203ENST00000340635 HMGB1P1B2RPK0 211 aaPredicted RBP15.81■□□□□ 0.12
PDE4D-203ENST00000340635 NUF2Q9BZD4 464 aa15.81■□□□□ 0.12
PDE4D-203ENST00000340635 SETDB1Q15047 1291 aa15.81■□□□□ 0.12
PDE4D-203ENST00000340635 IL1RAPL2Q9NP60 686 aa15.81■□□□□ 0.12
PDE4D-203ENST00000340635 PLCB3Q01970 1234 aa15.81■□□□□ 0.12
PDE4D-203ENST00000340635 TTF1Q15361 905 aaPredicted RBP15.81■□□□□ 0.12
PDE4D-203ENST00000340635 FSIP1Q8NA03 581 aa15.81■□□□□ 0.12
PDE4D-203ENST00000340635 PLEKHH1Q9ULM0 1364 aa15.81■□□□□ 0.12
PDE4D-203ENST00000340635 MICALL1Q8N3F8 863 aa15.81■□□□□ 0.12
PDE4D-203ENST00000340635 WHAMMQ8TF30 809 aa15.81■□□□□ 0.12
PDE4D-203ENST00000340635 GNG11P61952 73 aa15.81■□□□□ 0.12
PDE4D-203ENST00000340635 TRIM47Q96LD4 638 aa15.81■□□□□ 0.12
PDE4D-203ENST00000340635 VCX3BQ9H321 246 aa15.81■□□□□ 0.12
PDE4D-203ENST00000340635 AKR1B10O60218 316 aa15.8■□□□□ 0.12
PDE4D-203ENST00000340635 SETSIPP0DME0 302 aa15.8■□□□□ 0.12
PDE4D-203ENST00000340635 ERCC6LQ2NKX8 1250 aa15.8■□□□□ 0.12
PDE4D-203ENST00000340635 IFIT3O14879 490 aaKnown RBP15.8■□□□□ 0.12
PDE4D-203ENST00000340635 CCDC7Q96M83 1385 aa15.8■□□□□ 0.12
PDE4D-203ENST00000340635 UBA7P41226 1012 aa15.8■□□□□ 0.12
PDE4D-203ENST00000340635 PRIMPOLQ96LW4 560 aa15.8■□□□□ 0.12
PDE4D-203ENST00000340635 MAK16Q9BXY0 300 aaKnown RBP15.8■□□□□ 0.12
PDE4D-203ENST00000340635 BIN1O00499 593 aa15.8■□□□□ 0.12
PDE4D-203ENST00000340635 ERMNQ8TAM6 284 aa15.8■□□□□ 0.12
PDE4D-203ENST00000340635 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.8■□□□□ 0.12
PDE4D-203ENST00000340635 SH2B1Q9NRF2 756 aaPredicted RBP15.8■□□□□ 0.12
PDE4D-203ENST00000340635 VAT1LQ9HCJ6 419 aa15.79■□□□□ 0.12
PDE4D-203ENST00000340635 FAM114A2Q9NRY5 505 aa15.79■□□□□ 0.12
PDE4D-203ENST00000340635 XPCQ01831 940 aaPredicted RBP15.79■□□□□ 0.12
PDE4D-203ENST00000340635 SOGA1O94964 1423 aa15.79■□□□□ 0.12
PDE4D-203ENST00000340635 SLC5A1P13866 664 aa15.79■□□□□ 0.12
PDE4D-203ENST00000340635 STMN1P16949 149 aa15.79■□□□□ 0.12
PDE4D-203ENST00000340635 PRPF40BQ6NWY9 871 aaKnown RBP15.79■□□□□ 0.12
PDE4D-203ENST00000340635 SPAG5Q96R06 1193 aa15.79■□□□□ 0.12
PDE4D-203ENST00000340635 SULT6B1Q6IMI4 303 aa15.79■□□□□ 0.12
PDE4D-203ENST00000340635 PROSER2Q86WR7 435 aaPredicted RBP15.79■□□□□ 0.12
PDE4D-203ENST00000340635 NUTM1Q86Y26 1132 aa15.79■□□□□ 0.12
PDE4D-203ENST00000340635 ZNF710Q8N1W2 664 aa15.79■□□□□ 0.12
PDE4D-203ENST00000340635 PPFIBP2Q8ND30 876 aa15.79■□□□□ 0.12
PDE4D-203ENST00000340635 TSR2Q969E8 191 aaKnown RBP15.79■□□□□ 0.12
PDE4D-203ENST00000340635 JAKMIP2Q96AA8 810 aa15.79■□□□□ 0.12
PDE4D-203ENST00000340635 NCAPGQ9BPX3 1015 aa15.79■□□□□ 0.12
PDE4D-203ENST00000340635 CCDC171Q6TFL3 1326 aa15.79■□□□□ 0.12
PDE4D-203ENST00000340635 ADAMTS8Q9UP79 889 aa15.79■□□□□ 0.12
PDE4D-203ENST00000340635 CCDC170Q8IYT3 715 aa15.79■□□□□ 0.12
PDE4D-203ENST00000340635 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.79■□□□□ 0.12
PDE4D-203ENST00000340635 ARFGAP3Q9NP61 516 aa15.79■□□□□ 0.12
PDE4D-203ENST00000340635 RNF216Q9NWF9 866 aaPredicted RBP15.79■□□□□ 0.12
PDE4D-203ENST00000340635 RMND1Q9NWS8 449 aa15.79■□□□□ 0.12
PDE4D-203ENST00000340635 SIRT1Q96EB6 747 aa15.79■□□□□ 0.12
PDE4D-203ENST00000340635 FLIIQ13045 1269 aa15.78■□□□□ 0.12
PDE4D-203ENST00000340635 BIRC2Q13490 618 aa15.78■□□□□ 0.12
PDE4D-203ENST00000340635 PDE1CQ14123 709 aaPredicted RBP15.78■□□□□ 0.12
PDE4D-203ENST00000340635 CYLC1P35663 651 aaPredicted RBP15.78■□□□□ 0.12
PDE4D-203ENST00000340635 CPLX4Q7Z7G2 160 aa15.78■□□□□ 0.12
PDE4D-203ENST00000340635 TBC1D31Q96DN5 1066 aa15.78■□□□□ 0.12
PDE4D-203ENST00000340635 CABP5Q9NP86 173 aa15.78■□□□□ 0.12
PDE4D-203ENST00000340635 LACTBP83111 547 aaPredicted RBP15.78■□□□□ 0.12
PDE4D-203ENST00000340635 MSANTD4Q8NCY6 345 aa15.78■□□□□ 0.12
PDE4D-203ENST00000340635 PRR16Q569H4 304 aa15.78■□□□□ 0.12
PDE4D-203ENST00000340635 SAMD15Q9P1V8 674 aa15.78■□□□□ 0.12
PDE4D-203ENST00000340635 ATP11AP98196 1134 aa15.78■□□□□ 0.12
PDE4D-203ENST00000340635 RAB3IPQ96QF0 476 aaPredicted RBP15.78■□□□□ 0.12
PDE4D-203ENST00000340635 KCNK9Q9NPC2 374 aa15.78■□□□□ 0.12
PDE4D-203ENST00000340635 TCHPQ9BT92 498 aa15.77■□□□□ 0.12
PDE4D-203ENST00000340635 SMIM23A6NLE4 172 aa15.77■□□□□ 0.12
PDE4D-203ENST00000340635 CEP85LQ5SZL2 805 aa15.77■□□□□ 0.12
PDE4D-203ENST00000340635 CCDC65Q8IXS2 484 aa15.77■□□□□ 0.12
PDE4D-203ENST00000340635 DACT3Q96B18 629 aaPredicted RBP15.77■□□□□ 0.12
PDE4D-203ENST00000340635 KAT14Q9H8E8 782 aa15.77■□□□□ 0.12
PDE4D-203ENST00000340635 LMBR1Q8WVP7 490 aa15.77■□□□□ 0.11
PDE4D-203ENST00000340635 RPGRIP1LQ68CZ1 1315 aa15.77■□□□□ 0.11
PDE4D-203ENST00000340635 N4BP3O15049 544 aa15.77■□□□□ 0.11
PDE4D-203ENST00000340635 MCM6Q14566 821 aa15.77■□□□□ 0.11
PDE4D-203ENST00000340635 RASA3Q14644 834 aa15.77■□□□□ 0.11
PDE4D-203ENST00000340635 MGEA5O60502 916 aa15.76■□□□□ 0.11
PDE4D-203ENST00000340635 ISM2Q6H9L7 571 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms