RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 PDCL2Q8N4E4 241 aa19.18■□□□□ 0.66
SCARB1-202ENST00000339570 FTOQ9C0B1 505 aaKnown RBP eCLIP19.18■□□□□ 0.66
SCARB1-202ENST00000339570 PEAK1Q9H792 1746 aa19.17■□□□□ 0.66
SCARB1-202ENST00000339570 BLOC1S2Q6QNY1 142 aa19.17■□□□□ 0.66
SCARB1-202ENST00000339570 SYTL4Q96C24 671 aaPredicted RBP19.17■□□□□ 0.66
SCARB1-202ENST00000339570 EAF2Q96CJ1 260 aaPredicted RBP19.17■□□□□ 0.66
SCARB1-202ENST00000339570 GPATCH3Q96I76 525 aa19.17■□□□□ 0.66
SCARB1-202ENST00000339570 EIF4A1P60842 406 aaKnown RBP19.17■□□□□ 0.66
SCARB1-202ENST00000339570 POLA2Q14181 598 aa19.17■□□□□ 0.66
SCARB1-202ENST00000339570 LETM1O95202 739 aaPredicted RBP19.16■□□□□ 0.66
SCARB1-202ENST00000339570 SLC39A6Q13433 755 aa19.16■□□□□ 0.66
SCARB1-202ENST00000339570 ZNF589Q86UQ0 364 aaPredicted RBP19.16■□□□□ 0.66
SCARB1-202ENST00000339570 CCDC171Q6TFL3 1326 aa19.16■□□□□ 0.66
SCARB1-202ENST00000339570 H3BQV1 296 aa19.16■□□□□ 0.66
SCARB1-202ENST00000339570 NR1I2O75469 434 aa19.16■□□□□ 0.66
SCARB1-202ENST00000339570 HMGN5P82970 282 aaKnown RBP19.16■□□□□ 0.66
SCARB1-202ENST00000339570 ARID5BQ14865 1188 aa19.16■□□□□ 0.66
SCARB1-202ENST00000339570 IFFO2Q5TF58 517 aa19.16■□□□□ 0.66
SCARB1-202ENST00000339570 PRDM4Q9UKN5 801 aa19.16■□□□□ 0.66
SCARB1-202ENST00000339570 EID1Q9Y6B2 187 aa19.16■□□□□ 0.66
SCARB1-202ENST00000339570 SEC62Q99442 399 aaKnown RBP19.15■□□□□ 0.66
SCARB1-202ENST00000339570 BICC1Q9H694 974 aaKnown RBP19.15■□□□□ 0.66
SCARB1-202ENST00000339570 SSH2Q76I76 1423 aa19.15■□□□□ 0.66
SCARB1-202ENST00000339570 RICTORQ6R327 1708 aa19.15■□□□□ 0.66
SCARB1-202ENST00000339570 CBX8Q9HC52 389 aa19.15■□□□□ 0.66
SCARB1-202ENST00000339570 RIMBP3CA6NJZ7 1639 aa19.15■□□□□ 0.66
SCARB1-202ENST00000339570 RIMBP3BA6NNM3 1639 aa19.15■□□□□ 0.66
SCARB1-202ENST00000339570 RIMBP3Q9UFD9 1639 aa19.15■□□□□ 0.66
SCARB1-202ENST00000339570 SLC27A2O14975 620 aa19.15■□□□□ 0.66
SCARB1-202ENST00000339570 KIAA1524Q8TCG1 905 aa19.15■□□□□ 0.66
SCARB1-202ENST00000339570 TRMT1Q9NXH9 659 aaKnown RBP19.15■□□□□ 0.66
SCARB1-202ENST00000339570 MRVI1Q9Y6F6 885 aa19.15■□□□□ 0.66
SCARB1-202ENST00000339570 GOLGA6L6A8MZA4 724 aa19.14■□□□□ 0.65
SCARB1-202ENST00000339570 VPS53Q5VIR6 699 aa19.14■□□□□ 0.65
SCARB1-202ENST00000339570 FILIP1Q7Z7B0 1213 aa19.14■□□□□ 0.65
SCARB1-202ENST00000339570 SUCLG2Q96I99 432 aa19.14■□□□□ 0.65
SCARB1-202ENST00000339570 PRIMPOLQ96LW4 560 aa19.14■□□□□ 0.65
SCARB1-202ENST00000339570 CHST3Q7LGC8 479 aa19.13■□□□□ 0.65
SCARB1-202ENST00000339570 TNRQ92752 1358 aa19.13■□□□□ 0.65
SCARB1-202ENST00000339570 TPD52L1Q16890 204 aaPredicted RBP19.13■□□□□ 0.65
SCARB1-202ENST00000339570 HSP90AB4PQ58FF6 505 aa19.13■□□□□ 0.65
SCARB1-202ENST00000339570 TMEM87AQ8NBN3 555 aa19.13■□□□□ 0.65
SCARB1-202ENST00000339570 FAM200AQ8TCP9 573 aa19.13■□□□□ 0.65
SCARB1-202ENST00000339570 FUCA2Q9BTY2 467 aa19.13■□□□□ 0.65
SCARB1-202ENST00000339570 ZSWIM6Q9HCJ5 1215 aa19.13■□□□□ 0.65
SCARB1-202ENST00000339570 CCT2P78371 535 aaKnown RBP19.12■□□□□ 0.65
SCARB1-202ENST00000339570 RIC3Q7Z5B4 369 aa19.12■□□□□ 0.65
SCARB1-202ENST00000339570 MTERF4Q7Z6M4 381 aaKnown RBP19.12■□□□□ 0.65
SCARB1-202ENST00000339570 RAB11FIP4Q86YS3 637 aa19.12■□□□□ 0.65
SCARB1-202ENST00000339570 ZNF165P49910 485 aa19.12■□□□□ 0.65
SCARB1-202ENST00000339570 SASH1O94885 1247 aa19.11■□□□□ 0.65
SCARB1-202ENST00000339570 TMEM2Q9UHN6 1383 aa19.11■□□□□ 0.65
SCARB1-202ENST00000339570 BRF1Q92994 677 aa19.11■□□□□ 0.65
SCARB1-202ENST00000339570 EVI5LQ96CN4 794 aa19.11■□□□□ 0.65
SCARB1-202ENST00000339570 TNNT1P13805 278 aa19.1■□□□□ 0.65
SCARB1-202ENST00000339570 NECTIN1Q15223 517 aa19.1■□□□□ 0.65
SCARB1-202ENST00000339570 ZSCAN31Q96LW9 406 aaPredicted RBP19.1■□□□□ 0.65
SCARB1-202ENST00000339570 FMNL2Q96PY5 1086 aa19.1■□□□□ 0.65
SCARB1-202ENST00000339570 SH2B1Q9NRF2 756 aaPredicted RBP19.1■□□□□ 0.65
SCARB1-202ENST00000339570 CLIP2Q9UDT6 1046 aa19.1■□□□□ 0.65
SCARB1-202ENST00000339570 ITSN1Q15811 1721 aa19.1■□□□□ 0.65
SCARB1-202ENST00000339570 A0A0U1RQG5 324 aaPredicted RBP19.1■□□□□ 0.65
SCARB1-202ENST00000339570 KCNA6P17658 529 aa19.1■□□□□ 0.65
SCARB1-202ENST00000339570 DDX46Q7L014 1031 aaKnown RBP19.1■□□□□ 0.65
SCARB1-202ENST00000339570 AOX1Q06278 1338 aa19.1■□□□□ 0.65
SCARB1-202ENST00000339570 C1orf141Q5JVX7 400 aa19.1■□□□□ 0.65
SCARB1-202ENST00000339570 C3P01024 1663 aa19.09■□□□□ 0.65
SCARB1-202ENST00000339570 LEO1Q8WVC0 666 aaPredicted RBP19.09■□□□□ 0.65
SCARB1-202ENST00000339570 ADCY9O60503 1353 aa19.09■□□□□ 0.65
SCARB1-202ENST00000339570 ESCO1Q5FWF5 840 aa19.08■□□□□ 0.65
SCARB1-202ENST00000339570 ATP5J2-PTCD1G3V325 749 aa19.08■□□□□ 0.65
SCARB1-202ENST00000339570 PTCD1O75127 700 aaKnown RBP19.08■□□□□ 0.65
SCARB1-202ENST00000339570 TTC21AQ8NDW8 1320 aa19.08■□□□□ 0.65
SCARB1-202ENST00000339570 GOLGA6L19H0YKK7 550 aa19.08■□□□□ 0.64
SCARB1-202ENST00000339570 PSME1Q06323 249 aa19.08■□□□□ 0.64
SCARB1-202ENST00000339570 NCOA5Q9HCD5 579 aaKnown RBP19.08■□□□□ 0.64
SCARB1-202ENST00000339570 DBF4Q9UBU7 674 aaPredicted RBP19.08■□□□□ 0.64
SCARB1-202ENST00000339570 KDRP35968 1356 aa19.08■□□□□ 0.64
SCARB1-202ENST00000339570 USP31Q70CQ4 1352 aa19.08■□□□□ 0.64
SCARB1-202ENST00000339570 CCDC144BQ3MJ40 725 aa19.07■□□□□ 0.64
SCARB1-202ENST00000339570 CCDC144CPQ8IYA2 1237 aa19.07■□□□□ 0.64
SCARB1-202ENST00000339570 USP16Q9Y5T5 823 aa19.07■□□□□ 0.64
SCARB1-202ENST00000339570 PSMA5P28066 241 aa19.07■□□□□ 0.64
SCARB1-202ENST00000339570 ISM2Q6H9L7 571 aa19.07■□□□□ 0.64
SCARB1-202ENST00000339570 Q6ZUG5 572 aa19.07■□□□□ 0.64
SCARB1-202ENST00000339570 PGBD1Q96JS3 809 aa19.07■□□□□ 0.64
SCARB1-202ENST00000339570 NEUROD6Q96NK8 337 aa19.07■□□□□ 0.64
SCARB1-202ENST00000339570 TTC41PQ6P2S7 1318 aa19.07■□□□□ 0.64
SCARB1-202ENST00000339570 SMAP1Q8IYB5 467 aaPredicted RBP19.07■□□□□ 0.64
SCARB1-202ENST00000339570 ZBTB9Q96C00 473 aa19.07■□□□□ 0.64
SCARB1-202ENST00000339570 MYD88Q99836 296 aa19.07■□□□□ 0.64
SCARB1-202ENST00000339570 PPP6R1Q9UPN7 881 aa19.07■□□□□ 0.64
SCARB1-202ENST00000339570 MON2Q7Z3U7 1717 aa19.06■□□□□ 0.64
SCARB1-202ENST00000339570 HTATSF1O43719 755 aaKnown RBP19.06■□□□□ 0.64
SCARB1-202ENST00000339570 TOB2Q14106 344 aaPredicted RBP19.06■□□□□ 0.64
SCARB1-202ENST00000339570 RNF20Q5VTR2 975 aa19.06■□□□□ 0.64
SCARB1-202ENST00000339570 CACTINQ8WUQ7 758 aaKnown RBP19.06■□□□□ 0.64
SCARB1-202ENST00000339570 SPTLC3Q9NUV7 552 aa19.06■□□□□ 0.64
SCARB1-202ENST00000339570 BECN2A8MW95 431 aa19.06■□□□□ 0.64
SCARB1-202ENST00000339570 GRM8O00222 908 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms