RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 PCNTO95613 3336 aa19.74■□□□□ 0.75
PRKN-201ENST00000338468 SBF1O95248 1867 aa19.74■□□□□ 0.75
PRKN-201ENST00000338468 STYK1Q6J9G0 422 aa19.74■□□□□ 0.75
PRKN-201ENST00000338468 PLBD2Q8NHP8 589 aa19.74■□□□□ 0.75
PRKN-201ENST00000338468 NYXQ9GZU5 481 aa19.74■□□□□ 0.75
PRKN-201ENST00000338468 PHAXQ9H814 394 aaKnown RBP19.74■□□□□ 0.75
PRKN-201ENST00000338468 CCER2I3L3R5 266 aa19.73■□□□□ 0.75
PRKN-201ENST00000338468 TCIRG1Q13488 830 aa19.73■□□□□ 0.75
PRKN-201ENST00000338468 PARP10Q53GL7 1025 aa19.73■□□□□ 0.75
PRKN-201ENST00000338468 MASTLQ96GX5 879 aa19.73■□□□□ 0.75
PRKN-201ENST00000338468 ZNF521Q96K83 1311 aa19.73■□□□□ 0.75
PRKN-201ENST00000338468 ARFGEF2Q9Y6D5 1785 aa19.72■□□□□ 0.75
PRKN-201ENST00000338468 SLX4Q8IY92 1834 aa19.72■□□□□ 0.75
PRKN-201ENST00000338468 RIC1Q4ADV7 1423 aa19.72■□□□□ 0.75
PRKN-201ENST00000338468 ANKRD13DQ6ZTN6 518 aa19.72■□□□□ 0.75
PRKN-201ENST00000338468 NLRP10Q86W26 655 aa19.72■□□□□ 0.75
PRKN-201ENST00000338468 GTF2E1P29083 439 aaPredicted RBP19.71■□□□□ 0.75
PRKN-201ENST00000338468 PRELPP51888 382 aa19.71■□□□□ 0.75
PRKN-201ENST00000338468 RASSF7Q02833 373 aa19.71■□□□□ 0.75
PRKN-201ENST00000338468 TWISTNBQ3B726 338 aaPredicted RBP19.71■□□□□ 0.75
PRKN-201ENST00000338468 CRY2Q49AN0 593 aa19.71■□□□□ 0.75
PRKN-201ENST00000338468 HSP90AB3PQ58FF7 597 aa19.71■□□□□ 0.75
PRKN-201ENST00000338468 CCDC30Q5VVM6 783 aa19.71■□□□□ 0.75
PRKN-201ENST00000338468 TNS4Q8IZW8 715 aa19.71■□□□□ 0.75
PRKN-201ENST00000338468 CAPN15O75808 1086 aa19.7■□□□□ 0.74
PRKN-201ENST00000338468 NPR1P16066 1061 aa19.7■□□□□ 0.74
PRKN-201ENST00000338468 LMNB1P20700 586 aa19.7■□□□□ 0.74
PRKN-201ENST00000338468 PRPF40BQ6NWY9 871 aaKnown RBP19.7■□□□□ 0.74
PRKN-201ENST00000338468 C3orf67Q6ZVT6 689 aa19.7■□□□□ 0.74
PRKN-201ENST00000338468 PPP1R42Q7Z4L9 355 aa19.7■□□□□ 0.74
PRKN-201ENST00000338468 CNKSR1Q969H4 720 aa19.7■□□□□ 0.74
PRKN-201ENST00000338468 ISCA1Q9BUE6 129 aa19.7■□□□□ 0.74
PRKN-201ENST00000338468 CACNA1SQ13698 1873 aa19.7■□□□□ 0.74
PRKN-201ENST00000338468 NFKBIEO00221 500 aa19.69■□□□□ 0.74
PRKN-201ENST00000338468 TCERG1O14776 1098 aaKnown RBP19.69■□□□□ 0.74
PRKN-201ENST00000338468 C21orf2O43822 256 aa19.69■□□□□ 0.74
PRKN-201ENST00000338468 SYNE4Q8N205 404 aa19.69■□□□□ 0.74
PRKN-201ENST00000338468 C7orf43Q8WVR3 580 aa19.69■□□□□ 0.74
PRKN-201ENST00000338468 UTP14AQ9BVJ6 771 aaKnown RBP19.69■□□□□ 0.74
PRKN-201ENST00000338468 TIAM2Q8IVF5 1701 aa19.68■□□□□ 0.74
PRKN-201ENST00000338468 VEGFAP15692 232 aaPredicted RBP19.68■□□□□ 0.74
PRKN-201ENST00000338468 EXOSC9Q06265 439 aaKnown RBP19.68■□□□□ 0.74
PRKN-201ENST00000338468 SLC10A5Q5PT55 438 aa19.68■□□□□ 0.74
PRKN-201ENST00000338468 ZNF219Q9P2Y4 722 aaPredicted RBP19.68■□□□□ 0.74
PRKN-201ENST00000338468 GLTPD2A6NH11 291 aa19.67■□□□□ 0.74
PRKN-201ENST00000338468 ATP5J2-PTCD1G3V325 749 aa19.67■□□□□ 0.74
PRKN-201ENST00000338468 VAMP4O75379 141 aa19.67■□□□□ 0.74
PRKN-201ENST00000338468 ZNF428Q96B54 188 aa19.67■□□□□ 0.74
PRKN-201ENST00000338468 FER1L6Q2WGJ9 1857 aa19.67■□□□□ 0.74
PRKN-201ENST00000338468 GOLGA2Q08379 1002 aa19.66■□□□□ 0.74
PRKN-201ENST00000338468 CHMP4AQ9BY43 222 aa19.66■□□□□ 0.74
PRKN-201ENST00000338468 RNF123Q5XPI4 1314 aa19.66■□□□□ 0.74
PRKN-201ENST00000338468 HOXA10P31260 410 aaPredicted RBP19.65■□□□□ 0.74
PRKN-201ENST00000338468 TRIM28Q13263 835 aaKnown RBP19.65■□□□□ 0.74
PRKN-201ENST00000338468 DIEXFQ68CQ4 756 aaKnown RBP19.65■□□□□ 0.74
PRKN-201ENST00000338468 G2E3Q7L622 706 aa19.65■□□□□ 0.74
PRKN-201ENST00000338468 OLFM4Q6UX06 510 aa19.64■□□□□ 0.73
PRKN-201ENST00000338468 RIC3Q7Z5B4 369 aa19.64■□□□□ 0.73
PRKN-201ENST00000338468 TRMT112Q9UI30 125 aaKnown RBP19.64■□□□□ 0.73
PRKN-201ENST00000338468 LAMB2P55268 1798 aa19.64■□□□□ 0.73
PRKN-201ENST00000338468 SLC4A2P04920 1241 aa19.63■□□□□ 0.73
PRKN-201ENST00000338468 HSPA1AP0DMV8 641 aaKnown RBP19.63■□□□□ 0.73
PRKN-201ENST00000338468 HSPA1BP0DMV9 641 aaKnown RBP19.63■□□□□ 0.73
PRKN-201ENST00000338468 HCLS1P14317 486 aaPredicted RBP19.63■□□□□ 0.73
PRKN-201ENST00000338468 MIER1Q8N108 512 aa19.63■□□□□ 0.73
PRKN-201ENST00000338468 STK31Q9BXU1 1019 aa19.63■□□□□ 0.73
PRKN-201ENST00000338468 MYH16Q9H6N6 1097 aa19.63■□□□□ 0.73
PRKN-201ENST00000338468 DDX60Q8IY21 1712 aaKnown RBP19.62■□□□□ 0.73
PRKN-201ENST00000338468 SNED1Q8TER0 1413 aa19.62■□□□□ 0.73
PRKN-201ENST00000338468 SH3TC1Q8TE82 1336 aa19.62■□□□□ 0.73
PRKN-201ENST00000338468 ALDH1B1P30837 517 aa19.62■□□□□ 0.73
PRKN-201ENST00000338468 SLC51AQ86UW1 340 aa19.62■□□□□ 0.73
PRKN-201ENST00000338468 NLRP3Q96P20 1036 aa19.62■□□□□ 0.73
PRKN-201ENST00000338468 CCDC88AQ3V6T2 1871 aa19.61■□□□□ 0.73
PRKN-201ENST00000338468 LTBP3Q9NS15 1303 aa19.61■□□□□ 0.73
PRKN-201ENST00000338468 FAM89AQ96GI7 184 aa19.61■□□□□ 0.73
PRKN-201ENST00000338468 CRAMP1Q96RY5 1269 aa19.61■□□□□ 0.73
PRKN-201ENST00000338468 MYD88Q99836 296 aa19.61■□□□□ 0.73
PRKN-201ENST00000338468 METTL22Q9BUU2 404 aaPredicted RBP19.61■□□□□ 0.73
PRKN-201ENST00000338468 PI4KAP2A4QPH2 592 aa19.6■□□□□ 0.73
PRKN-201ENST00000338468 DDX58O95786 925 aaKnown RBP19.6■□□□□ 0.73
PRKN-201ENST00000338468 KSR2Q6VAB6 950 aa19.6■□□□□ 0.73
PRKN-201ENST00000338468 PI4KAP1Q8N8J0 262 aa19.6■□□□□ 0.73
PRKN-201ENST00000338468 RPGRQ92834 1020 aaKnown RBP19.6■□□□□ 0.73
PRKN-201ENST00000338468 MAP3K2Q9Y2U5 619 aa19.6■□□□□ 0.73
PRKN-201ENST00000338468 CCDC93Q567U6 631 aa19.59■□□□□ 0.73
PRKN-201ENST00000338468 SOGA3Q5TF21 947 aa19.59■□□□□ 0.73
PRKN-201ENST00000338468 DPY19L2Q6NUT2 758 aa19.59■□□□□ 0.73
PRKN-201ENST00000338468 RBM17Q96I25 401 aaKnown RBP19.59■□□□□ 0.73
PRKN-201ENST00000338468 IGKV5-2P06315 115 aa19.58■□□□□ 0.72
PRKN-201ENST00000338468 FLIIQ13045 1269 aa19.58■□□□□ 0.72
PRKN-201ENST00000338468 CCDC191Q8NCU4 936 aa19.58■□□□□ 0.72
PRKN-201ENST00000338468 TAOK3Q9H2K8 898 aa19.58■□□□□ 0.72
PRKN-201ENST00000338468 CACNA1FO60840 1977 aa19.57■□□□□ 0.72
PRKN-201ENST00000338468 ABCC4O15439 1325 aa19.57■□□□□ 0.72
PRKN-201ENST00000338468 SLFN5Q08AF3 891 aa19.57■□□□□ 0.72
PRKN-201ENST00000338468 RTL5Q5HYW3 569 aaPredicted RBP19.57■□□□□ 0.72
PRKN-201ENST00000338468 CDCA7LQ96GN5 454 aa19.57■□□□□ 0.72
PRKN-201ENST00000338468 E9PSI1 815 aa19.56■□□□□ 0.72
PRKN-201ENST00000338468 ZBTB38Q8NAP3 1195 aaPredicted RBP19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 1053.1 ms