RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 POTEJP0CG39 1038 aa17.46■□□□□ 0.39
NUDCD3-201ENST00000338427 FKBP4Q02790 459 aaKnown RBP eCLIP17.46■□□□□ 0.39
NUDCD3-201ENST00000338427 FSTL1Q12841 308 aa17.46■□□□□ 0.39
NUDCD3-201ENST00000338427 SOGA3Q5TF21 947 aa17.46■□□□□ 0.39
NUDCD3-201ENST00000338427 DDX21Q9NR30 783 aaKnown RBP eCLIP17.46■□□□□ 0.39
NUDCD3-201ENST00000338427 MBIPQ9NS73 344 aa17.46■□□□□ 0.39
NUDCD3-201ENST00000338427 HCLS1P14317 486 aaPredicted RBP17.45■□□□□ 0.38
NUDCD3-201ENST00000338427 HOXA10P31260 410 aaPredicted RBP17.45■□□□□ 0.38
NUDCD3-201ENST00000338427 PPP1R42Q7Z4L9 355 aa17.45■□□□□ 0.38
NUDCD3-201ENST00000338427 RPGRQ92834 1020 aaKnown RBP17.45■□□□□ 0.38
NUDCD3-201ENST00000338427 UTP14AQ9BVJ6 771 aaKnown RBP17.45■□□□□ 0.38
NUDCD3-201ENST00000338427 TCIRG1Q13488 830 aa17.44■□□□□ 0.38
NUDCD3-201ENST00000338427 SLC10A5Q5PT55 438 aa17.44■□□□□ 0.38
NUDCD3-201ENST00000338427 DUSP27Q5VZP5 1158 aa17.44■□□□□ 0.38
NUDCD3-201ENST00000338427 NLRP10Q86W26 655 aa17.44■□□□□ 0.38
NUDCD3-201ENST00000338427 RTKN2Q8IZC4 609 aa17.44■□□□□ 0.38
NUDCD3-201ENST00000338427 SMC1BQ8NDV3 1235 aa17.44■□□□□ 0.38
NUDCD3-201ENST00000338427 CFAP44Q96MT7 982 aa17.44■□□□□ 0.38
NUDCD3-201ENST00000338427 ZNF541Q9H0D2 1346 aa17.44■□□□□ 0.38
NUDCD3-201ENST00000338427 TIAM2Q8IVF5 1701 aa17.44■□□□□ 0.38
NUDCD3-201ENST00000338427 DICER1Q9UPY3 1922 aaKnown RBP17.43■□□□□ 0.38
NUDCD3-201ENST00000338427 ZNF853P0CG23 659 aa17.43■□□□□ 0.38
NUDCD3-201ENST00000338427 PARP10Q53GL7 1025 aa17.43■□□□□ 0.38
NUDCD3-201ENST00000338427 HDGFL1Q5TGJ6 251 aa17.43■□□□□ 0.38
NUDCD3-201ENST00000338427 RBM17Q96I25 401 aaKnown RBP17.43■□□□□ 0.38
NUDCD3-201ENST00000338427 NLRP3Q96P20 1036 aa17.43■□□□□ 0.38
NUDCD3-201ENST00000338427 ATP5J2-PTCD1G3V325 749 aa17.42■□□□□ 0.38
NUDCD3-201ENST00000338427 IARSP41252 1262 aaKnown RBP17.42■□□□□ 0.38
NUDCD3-201ENST00000338427 CRAMP1Q96RY5 1269 aa17.42■□□□□ 0.38
NUDCD3-201ENST00000338427 C8orf58Q8NAV2 365 aa17.41■□□□□ 0.38
NUDCD3-201ENST00000338427 TRMT112Q9UI30 125 aaKnown RBP17.41■□□□□ 0.38
NUDCD3-201ENST00000338427 ARFGEF2Q9Y6D5 1785 aa17.4■□□□□ 0.38
NUDCD3-201ENST00000338427 RTL5Q5HYW3 569 aaPredicted RBP17.4■□□□□ 0.38
NUDCD3-201ENST00000338427 ANKRD13DQ6ZTN6 518 aa17.4■□□□□ 0.38
NUDCD3-201ENST00000338427 PHAXQ9H814 394 aaKnown RBP17.4■□□□□ 0.38
NUDCD3-201ENST00000338427 PPEF1O14829 653 aaPredicted RBP17.39■□□□□ 0.37
NUDCD3-201ENST00000338427 SNED1Q8TER0 1413 aa17.38■□□□□ 0.37
NUDCD3-201ENST00000338427 WDR90Q96KV7 1748 aa17.38■□□□□ 0.37
NUDCD3-201ENST00000338427 FZD9O00144 591 aa17.38■□□□□ 0.37
NUDCD3-201ENST00000338427 HSP90AB3PQ58FF7 597 aa17.38■□□□□ 0.37
NUDCD3-201ENST00000338427 PLBD2Q8NHP8 589 aa17.38■□□□□ 0.37
NUDCD3-201ENST00000338427 KLRG1Q96E93 195 aa17.38■□□□□ 0.37
NUDCD3-201ENST00000338427 FAM89AQ96GI7 184 aa17.38■□□□□ 0.37
NUDCD3-201ENST00000338427 TAF1DQ9H5J8 278 aaPredicted RBP17.38■□□□□ 0.37
NUDCD3-201ENST00000338427 DBF4Q9UBU7 674 aaPredicted RBP17.38■□□□□ 0.37
NUDCD3-201ENST00000338427 IBTKQ9P2D0 1353 aaPredicted RBP17.38■□□□□ 0.37
NUDCD3-201ENST00000338427 COL4A5P29400 1685 aa17.37■□□□□ 0.37
NUDCD3-201ENST00000338427 TSPYL6Q8N831 410 aa17.37■□□□□ 0.37
NUDCD3-201ENST00000338427 JARID2Q92833 1246 aaPredicted RBP17.37■□□□□ 0.37
NUDCD3-201ENST00000338427 PSMD1Q99460 953 aa17.37■□□□□ 0.37
NUDCD3-201ENST00000338427 ISCA1Q9BUE6 129 aa17.37■□□□□ 0.37
NUDCD3-201ENST00000338427 IFT57Q9NWB7 429 aa17.37■□□□□ 0.37
NUDCD3-201ENST00000338427 GJA3Q9Y6H8 435 aa17.37■□□□□ 0.37
NUDCD3-201ENST00000338427 ABCC4O15439 1325 aa17.37■□□□□ 0.37
NUDCD3-201ENST00000338427 GNAI1P63096 354 aa17.36■□□□□ 0.37
NUDCD3-201ENST00000338427 CC2D2BQ6DHV5 1058 aa17.36■□□□□ 0.37
NUDCD3-201ENST00000338427 CHADLQ6NUI6 762 aa17.36■□□□□ 0.37
NUDCD3-201ENST00000338427 ATP6V0A2Q9Y487 856 aa17.36■□□□□ 0.37
NUDCD3-201ENST00000338427 ZNF316A6NFI3 1004 aaPredicted RBP17.35■□□□□ 0.37
NUDCD3-201ENST00000338427 HOXB7P09629 217 aa17.35■□□□□ 0.37
NUDCD3-201ENST00000338427 EAPPQ56P03 285 aaPredicted RBP17.35■□□□□ 0.37
NUDCD3-201ENST00000338427 LARGE2Q8N3Y3 721 aa17.35■□□□□ 0.37
NUDCD3-201ENST00000338427 JDP2Q8WYK2 163 aa17.35■□□□□ 0.37
NUDCD3-201ENST00000338427 TSR2Q969E8 191 aaKnown RBP17.35■□□□□ 0.37
NUDCD3-201ENST00000338427 L3MBTL3Q96JM7 780 aaPredicted RBP17.35■□□□□ 0.37
NUDCD3-201ENST00000338427 HYPKQ9NX55 129 aa17.35■□□□□ 0.37
NUDCD3-201ENST00000338427 SALL2Q9Y467 1007 aaPredicted RBP17.35■□□□□ 0.37
NUDCD3-201ENST00000338427 RNF123Q5XPI4 1314 aa17.35■□□□□ 0.37
NUDCD3-201ENST00000338427 SH3TC1Q8TE82 1336 aa17.35■□□□□ 0.37
NUDCD3-201ENST00000338427 TAF1P21675 1872 aa17.35■□□□□ 0.37
NUDCD3-201ENST00000338427 AOC3Q16853 763 aa17.34■□□□□ 0.37
NUDCD3-201ENST00000338427 RIC1Q4ADV7 1423 aa17.34■□□□□ 0.37
NUDCD3-201ENST00000338427 CLEC11AQ9Y240 323 aa17.34■□□□□ 0.37
NUDCD3-201ENST00000338427 BBOX1O75936 387 aa17.33■□□□□ 0.36
NUDCD3-201ENST00000338427 DDX46Q7L014 1031 aaKnown RBP17.33■□□□□ 0.36
NUDCD3-201ENST00000338427 RIC3Q7Z5B4 369 aa17.33■□□□□ 0.36
NUDCD3-201ENST00000338427 SP8Q8IXZ3 490 aa17.33■□□□□ 0.36
NUDCD3-201ENST00000338427 HACL1Q9UJ83 578 aa17.33■□□□□ 0.36
NUDCD3-201ENST00000338427 PPIP5K2O43314 1243 aa17.32■□□□□ 0.36
NUDCD3-201ENST00000338427 EPHX2P34913 555 aa17.32■□□□□ 0.36
NUDCD3-201ENST00000338427 ZEB1P37275 1124 aaPredicted RBP17.32■□□□□ 0.36
NUDCD3-201ENST00000338427 EIF6P56537 245 aaKnown RBP17.32■□□□□ 0.36
NUDCD3-201ENST00000338427 CELF1Q92879 486 aaKnown RBP17.32■□□□□ 0.36
NUDCD3-201ENST00000338427 MYD88Q99836 296 aa17.32■□□□□ 0.36
NUDCD3-201ENST00000338427 IQCA1LA6NCM1 817 aa17.31■□□□□ 0.36
NUDCD3-201ENST00000338427 ITGBL1O95965 494 aaPredicted RBP17.31■□□□□ 0.36
NUDCD3-201ENST00000338427 EPS15P42566 896 aa17.31■□□□□ 0.36
NUDCD3-201ENST00000338427 GRAPQ13588 217 aa17.31■□□□□ 0.36
NUDCD3-201ENST00000338427 MPNDQ8N594 471 aa17.31■□□□□ 0.36
NUDCD3-201ENST00000338427 JMYQ8N9B5 988 aa17.31■□□□□ 0.36
NUDCD3-201ENST00000338427 GRAPLQ8TC17 118 aaPredicted RBP17.31■□□□□ 0.36
NUDCD3-201ENST00000338427 FMR1Q06787 632 aaKnown RBP eCLIP17.3■□□□□ 0.36
NUDCD3-201ENST00000338427 MAP1SQ66K74 1059 aaPredicted RBP17.3■□□□□ 0.36
NUDCD3-201ENST00000338427 DPP8Q6V1X1 898 aaPredicted RBP17.3■□□□□ 0.36
NUDCD3-201ENST00000338427 LDHDQ86WU2 507 aa17.3■□□□□ 0.36
NUDCD3-201ENST00000338427 WWC1Q8IX03 1113 aa17.3■□□□□ 0.36
NUDCD3-201ENST00000338427 GPC2Q8N158 579 aa17.3■□□□□ 0.36
NUDCD3-201ENST00000338427 MRS2Q9HD23 443 aa17.3■□□□□ 0.36
NUDCD3-201ENST00000338427 LAMB2P55268 1798 aa17.3■□□□□ 0.36
NUDCD3-201ENST00000338427 IRS4O14654 1257 aaPredicted RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms