RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 GBP4Q96PP9 640 aa28.02■■■□□ 2.08
CLPTM1-201ENST00000337392 ARFGEF2Q9Y6D5 1785 aa28.01■■■□□ 2.07
CLPTM1-201ENST00000337392 SYTL4Q96C24 671 aaPredicted RBP28.01■■■□□ 2.07
CLPTM1-201ENST00000337392 ABCA3Q99758 1704 aa28.01■■■□□ 2.07
CLPTM1-201ENST00000337392 A0A0G2JS52 829 aa28.01■■■□□ 2.07
CLPTM1-201ENST00000337392 CASP7P55210 303 aa28.01■■■□□ 2.07
CLPTM1-201ENST00000337392 ADCK5Q3MIX3 580 aa28.01■■■□□ 2.07
CLPTM1-201ENST00000337392 DBNLQ9UJU6 430 aaKnown RBP28.01■■■□□ 2.07
CLPTM1-201ENST00000337392 ERVV-2B6SEH9 535 aa28■■■□□ 2.07
CLPTM1-201ENST00000337392 PIGBQ92521 554 aa28■■■□□ 2.07
CLPTM1-201ENST00000337392 PANK2Q9BZ23 570 aa28■■■□□ 2.07
CLPTM1-201ENST00000337392 SLFNL1Q499Z3 407 aa28■■■□□ 2.07
CLPTM1-201ENST00000337392 A0A0D9SFI3 127 aa27.99■■■□□ 2.07
CLPTM1-201ENST00000337392 NMIQ13287 307 aaPredicted RBP27.99■■■□□ 2.07
CLPTM1-201ENST00000337392 PRPF40BQ6NWY9 871 aaKnown RBP27.99■■■□□ 2.07
CLPTM1-201ENST00000337392 DNAJC10Q8IXB1 793 aa27.99■■■□□ 2.07
CLPTM1-201ENST00000337392 TMOD3Q9NYL9 352 aa27.99■■■□□ 2.07
CLPTM1-201ENST00000337392 TAF6LQ9Y6J9 622 aa27.99■■■□□ 2.07
CLPTM1-201ENST00000337392 PARP4Q9UKK3 1724 aaKnown RBP27.98■■■□□ 2.07
CLPTM1-201ENST00000337392 KCPQ6ZWJ8 1503 aa27.98■■■□□ 2.07
CLPTM1-201ENST00000337392 SYNE4Q8N205 404 aa27.98■■■□□ 2.07
CLPTM1-201ENST00000337392 SHANK3Q9BYB0 1731 aa27.98■■■□□ 2.07
CLPTM1-201ENST00000337392 KIAA1211Q6ZU35 1233 aa27.98■■■□□ 2.07
CLPTM1-201ENST00000337392 GPATCH3Q96I76 525 aa27.98■■■□□ 2.07
CLPTM1-201ENST00000337392 DBNDD2Q9BQY9 259 aa27.98■■■□□ 2.07
CLPTM1-201ENST00000337392 CYP2E1P05181 493 aaPredicted RBP27.97■■■□□ 2.07
CLPTM1-201ENST00000337392 NKX1-1Q15270 411 aaPredicted RBP27.97■■■□□ 2.07
CLPTM1-201ENST00000337392 ABCC6O95255 1503 aa27.97■■■□□ 2.07
CLPTM1-201ENST00000337392 FOXO4P98177 505 aa27.96■■■□□ 2.07
CLPTM1-201ENST00000337392 FSD1Q9BTV5 496 aa27.96■■■□□ 2.07
CLPTM1-201ENST00000337392 HDAC5Q9UQL6 1122 aa27.96■■■□□ 2.07
CLPTM1-201ENST00000337392 DNAJC2Q99543 621 aaKnown RBP27.96■■■□□ 2.07
CLPTM1-201ENST00000337392 ADAMTS2O95450 1211 aa27.95■■■□□ 2.06
CLPTM1-201ENST00000337392 ZNF589Q86UQ0 364 aaPredicted RBP27.95■■■□□ 2.06
CLPTM1-201ENST00000337392 TCEANC2Q96MN5 208 aa27.95■■■□□ 2.06
CLPTM1-201ENST00000337392 TOGARAM1Q9Y4F4 1720 aa27.95■■■□□ 2.06
CLPTM1-201ENST00000337392 CASTP20810 708 aaKnown RBP27.94■■■□□ 2.06
CLPTM1-201ENST00000337392 ANAPC15P60006 121 aa27.94■■■□□ 2.06
CLPTM1-201ENST00000337392 TNNI3KQ59H18 835 aa27.94■■■□□ 2.06
CLPTM1-201ENST00000337392 EVI5LQ96CN4 794 aa27.94■■■□□ 2.06
CLPTM1-201ENST00000337392 COPRSQ9NQ92 184 aa27.94■■■□□ 2.06
CLPTM1-201ENST00000337392 FPGT-TNNI3KV9GXZ4 949 aa27.94■■■□□ 2.06
CLPTM1-201ENST00000337392 LRRC24Q50LG9 513 aa27.94■■■□□ 2.06
CLPTM1-201ENST00000337392 LARGE1O95461 756 aa27.93■■■□□ 2.06
CLPTM1-201ENST00000337392 AK2P54819 239 aa27.93■■■□□ 2.06
CLPTM1-201ENST00000337392 TIMM10P62072 90 aa27.93■■■□□ 2.06
CLPTM1-201ENST00000337392 RABL6Q3YEC7 729 aaPredicted RBP27.93■■■□□ 2.06
CLPTM1-201ENST00000337392 GAS2L3Q86XJ1 694 aa27.93■■■□□ 2.06
CLPTM1-201ENST00000337392 XRCC6P12956 609 aaKnown RBP eCLIP27.93■■■□□ 2.06
CLPTM1-201ENST00000337392 PUS3Q9BZE2 481 aaKnown RBP27.93■■■□□ 2.06
CLPTM1-201ENST00000337392 CWC25Q9NXE8 425 aaPredicted RBP27.93■■■□□ 2.06
CLPTM1-201ENST00000337392 SEC62Q99442 399 aaKnown RBP27.92■■■□□ 2.06
CLPTM1-201ENST00000337392 TPRNQ4KMQ1 711 aa27.92■■■□□ 2.06
CLPTM1-201ENST00000337392 NEUROD6Q96NK8 337 aa27.92■■■□□ 2.06
CLPTM1-201ENST00000337392 SLC4A9Q96Q91 983 aa27.92■■■□□ 2.06
CLPTM1-201ENST00000337392 ATG3Q9NT62 314 aa27.92■■■□□ 2.06
CLPTM1-201ENST00000337392 NCLP19338 710 aaKnown RBP27.91■■■□□ 2.06
CLPTM1-201ENST00000337392 DDX46Q7L014 1031 aaKnown RBP27.91■■■□□ 2.06
CLPTM1-201ENST00000337392 FAM89AQ96GI7 184 aa27.91■■■□□ 2.06
CLPTM1-201ENST00000337392 H7C1W4 665 aa27.91■■■□□ 2.06
CLPTM1-201ENST00000337392 CCDC129Q6ZRS4 1044 aa27.91■■■□□ 2.06
CLPTM1-201ENST00000337392 GOLGA6L3A6NEY3 463 aa27.9■■■□□ 2.06
CLPTM1-201ENST00000337392 GPTP24298 496 aa27.9■■■□□ 2.06
CLPTM1-201ENST00000337392 JAKMIP1Q96N16 626 aaKnown RBP27.9■■■□□ 2.06
CLPTM1-201ENST00000337392 NUCB2P80303 420 aa27.9■■■□□ 2.06
CLPTM1-201ENST00000337392 RUFY3Q7L099 469 aa27.9■■■□□ 2.06
CLPTM1-201ENST00000337392 DDX49Q9Y6V7 483 aaKnown RBP27.89■■■□□ 2.06
CLPTM1-201ENST00000337392 LAMB4A4D0S4 1761 aa27.89■■■□□ 2.06
CLPTM1-201ENST00000337392 PRPF40AO75400 957 aaKnown RBP27.89■■■□□ 2.06
CLPTM1-201ENST00000337392 KCNJ4P48050 445 aa27.89■■■□□ 2.06
CLPTM1-201ENST00000337392 RBM8AQ9Y5S9 174 aaKnown RBP27.89■■■□□ 2.06
CLPTM1-201ENST00000337392 ATG9AQ7Z3C6 839 aa27.88■■■□□ 2.05
CLPTM1-201ENST00000337392 UBR2Q8IWV8 1755 aa27.88■■■□□ 2.05
CLPTM1-201ENST00000337392 HLFQ16534 295 aa27.88■■■□□ 2.05
CLPTM1-201ENST00000337392 CCDC171Q6TFL3 1326 aa27.87■■■□□ 2.05
CLPTM1-201ENST00000337392 CUL4AQ13619 759 aa27.87■■■□□ 2.05
CLPTM1-201ENST00000337392 PKNOX2Q96KN3 472 aa27.87■■■□□ 2.05
CLPTM1-201ENST00000337392 TTC14Q96N46 770 aa27.87■■■□□ 2.05
CLPTM1-201ENST00000337392 GDPD2Q9HCC8 539 aa27.87■■■□□ 2.05
CLPTM1-201ENST00000337392 CWC22Q9HCG8 908 aaKnown RBP27.87■■■□□ 2.05
CLPTM1-201ENST00000337392 NSFL1CQ9UNZ2 370 aaKnown RBP27.87■■■□□ 2.05
CLPTM1-201ENST00000337392 NHSL1Q5SYE7 1610 aa27.86■■■□□ 2.05
CLPTM1-201ENST00000337392 COL15A1P39059 1388 aa27.86■■■□□ 2.05
CLPTM1-201ENST00000337392 FSD2A1L4K1 749 aa27.86■■■□□ 2.05
CLPTM1-201ENST00000337392 RUFY2Q8WXA3 655 aa27.85■■■□□ 2.05
CLPTM1-201ENST00000337392 LMBRD1Q9NUN5 540 aa27.85■■■□□ 2.05
CLPTM1-201ENST00000337392 RBM27Q9P2N5 1060 aaKnown RBP27.85■■■□□ 2.05
CLPTM1-201ENST00000337392 TNS2Q63HR2 1409 aa27.84■■■□□ 2.05
CLPTM1-201ENST00000337392 NECTIN1Q15223 517 aa27.84■■■□□ 2.05
CLPTM1-201ENST00000337392 NUTM2BA6NNL0 878 aaPredicted RBP27.83■■■□□ 2.05
CLPTM1-201ENST00000337392 NUTM2EB1AL46 878 aaPredicted RBP27.83■■■□□ 2.05
CLPTM1-201ENST00000337392 CREB3L3Q68CJ9 461 aa27.83■■■□□ 2.05
CLPTM1-201ENST00000337392 NUTM2AQ8IVF1 878 aaPredicted RBP27.83■■■□□ 2.05
CLPTM1-201ENST00000337392 ACSBG1Q96GR2 724 aa27.83■■■□□ 2.05
CLPTM1-201ENST00000337392 CAVIN1Q6NZI2 390 aaKnown RBP27.83■■■□□ 2.05
CLPTM1-201ENST00000337392 GOLGA6L22H0YM25 854 aa27.82■■■□□ 2.04
CLPTM1-201ENST00000337392 PRIM1P49642 420 aaKnown RBP27.82■■■□□ 2.04
CLPTM1-201ENST00000337392 NECAB1Q8N987 351 aa27.82■■■□□ 2.04
CLPTM1-201ENST00000337392 ZBTB1Q9Y2K1 713 aa27.82■■■□□ 2.04
CLPTM1-201ENST00000337392 GOLGB1Q14789 3259 aaKnown RBP27.81■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms