RNA–Protein interactions for RNA: ENST00000336119.7

NLRP3-201, Transcript of NLR family pyrin domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRP3, Length 4,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-201ENST00000336119 SSH2Q76I76 1423 aa10.98□□□□□ -0.65
NLRP3-201ENST00000336119 HMGB1P09429 215 aaKnown RBP10.98□□□□□ -0.65
NLRP3-201ENST00000336119 ZSCAN22P10073 491 aaPredicted RBP10.98□□□□□ -0.65
NLRP3-201ENST00000336119 CCDC183Q5T5S1 534 aa10.98□□□□□ -0.65
NLRP3-201ENST00000336119 ZSCAN25Q6NSZ9 544 aa10.98□□□□□ -0.65
NLRP3-201ENST00000336119 LMBR1LQ6UX01 489 aa10.98□□□□□ -0.65
NLRP3-201ENST00000336119 ZSCAN30Q86W11 494 aa10.98□□□□□ -0.65
NLRP3-201ENST00000336119 ZNF396Q96N95 335 aaPredicted RBP10.98□□□□□ -0.65
NLRP3-201ENST00000336119 RAD50Q92878 1312 aa10.98□□□□□ -0.65
NLRP3-201ENST00000336119 HSPA4P34932 840 aa10.98□□□□□ -0.65
NLRP3-201ENST00000336119 AK2P54819 239 aa10.98□□□□□ -0.65
NLRP3-201ENST00000336119 NFXL1Q6ZNB6 911 aa10.98□□□□□ -0.65
NLRP3-201ENST00000336119 SUCLG2Q96I99 432 aa10.98□□□□□ -0.65
NLRP3-201ENST00000336119 GDPD2Q9HCC8 539 aa10.98□□□□□ -0.65
NLRP3-201ENST00000336119 CD2BP2O95400 341 aaKnown RBP10.97□□□□□ -0.65
NLRP3-201ENST00000336119 NMIQ13287 307 aaPredicted RBP10.97□□□□□ -0.65
NLRP3-201ENST00000336119 SPATA32Q96LK8 384 aa10.97□□□□□ -0.65
NLRP3-201ENST00000336119 RBM27Q9P2N5 1060 aaKnown RBP10.97□□□□□ -0.65
NLRP3-201ENST00000336119 CFAP45Q9UL16 551 aa10.97□□□□□ -0.65
NLRP3-201ENST00000336119 PIP4K2AP48426 406 aaPredicted RBP10.97□□□□□ -0.65
NLRP3-201ENST00000336119 FERMT3Q86UX7 667 aa10.97□□□□□ -0.65
NLRP3-201ENST00000336119 SCAND2PQ9GZW5 306 aaPredicted RBP10.97□□□□□ -0.65
NLRP3-201ENST00000336119 IFIT5Q13325 482 aaKnown RBP10.97□□□□□ -0.65
NLRP3-201ENST00000336119 HSP90AB3PQ58FF7 597 aa10.97□□□□□ -0.65
NLRP3-201ENST00000336119 CCDC85AQ96PX6 553 aaPredicted RBP10.97□□□□□ -0.65
NLRP3-201ENST00000336119 TPM3P06753 285 aa10.96□□□□□ -0.65
NLRP3-201ENST00000336119 VPS53Q5VIR6 699 aa10.96□□□□□ -0.65
NLRP3-201ENST00000336119 LRSAM1Q6UWE0 723 aa10.96□□□□□ -0.65
NLRP3-201ENST00000336119 ZNF496Q96IT1 587 aaPredicted RBP10.96□□□□□ -0.65
NLRP3-201ENST00000336119 GCKRQ14397 625 aa10.96□□□□□ -0.65
NLRP3-201ENST00000336119 NEK1Q96PY6 1258 aa10.96□□□□□ -0.65
NLRP3-201ENST00000336119 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.96□□□□□ -0.65
NLRP3-201ENST00000336119 SNX14Q9Y5W7 946 aa10.96□□□□□ -0.65
NLRP3-201ENST00000336119 CCDC171Q6TFL3 1326 aa10.96□□□□□ -0.66
NLRP3-201ENST00000336119 IL15P40933 162 aaPredicted RBP10.96□□□□□ -0.66
NLRP3-201ENST00000336119 UBE2HP62256 183 aa10.96□□□□□ -0.66
NLRP3-201ENST00000336119 AKAP17AQ02040 695 aaKnown RBP10.96□□□□□ -0.66
NLRP3-201ENST00000336119 METTL24Q5JXM2 366 aa10.96□□□□□ -0.66
NLRP3-201ENST00000336119 TNMDQ9H2S6 317 aa10.96□□□□□ -0.66
NLRP3-201ENST00000336119 GOLIM4O00461 696 aa10.95□□□□□ -0.66
NLRP3-201ENST00000336119 ITSN1Q15811 1721 aa10.95□□□□□ -0.66
NLRP3-201ENST00000336119 CREB3L3Q68CJ9 461 aa10.95□□□□□ -0.66
NLRP3-201ENST00000336119 PLBD2Q8NHP8 589 aa10.95□□□□□ -0.66
NLRP3-201ENST00000336119 IL2RBP14784 551 aa10.95□□□□□ -0.66
NLRP3-201ENST00000336119 PHKG2P15735 406 aa10.95□□□□□ -0.66
NLRP3-201ENST00000336119 DDX17Q92841 729 aaKnown RBP10.95□□□□□ -0.66
NLRP3-201ENST00000336119 NUP62CLQ9H1M0 184 aa10.95□□□□□ -0.66
NLRP3-201ENST00000336119 KINO60870 393 aaKnown RBP10.95□□□□□ -0.66
NLRP3-201ENST00000336119 IMMTQ16891 758 aaKnown RBP10.95□□□□□ -0.66
NLRP3-201ENST00000336119 C8orf37Q96NL8 207 aa10.95□□□□□ -0.66
NLRP3-201ENST00000336119 ERICH2A1L162 156 aa10.95□□□□□ -0.66
NLRP3-201ENST00000336119 FAM177BA6PVY3 158 aa10.95□□□□□ -0.66
NLRP3-201ENST00000336119 POLA2Q14181 598 aa10.95□□□□□ -0.66
NLRP3-201ENST00000336119 MCMDC2Q4G0Z9 681 aa10.95□□□□□ -0.66
NLRP3-201ENST00000336119 DDX46Q7L014 1031 aaKnown RBP10.95□□□□□ -0.66
NLRP3-201ENST00000336119 USP48Q86UV5 1035 aa10.95□□□□□ -0.66
NLRP3-201ENST00000336119 VPS37DQ86XT2 251 aa10.95□□□□□ -0.66
NLRP3-201ENST00000336119 DDX11Q96FC9 970 aa10.95□□□□□ -0.66
NLRP3-201ENST00000336119 SDF4Q9BRK5 362 aa10.95□□□□□ -0.66
NLRP3-201ENST00000336119 ADGRL3Q9HAR2 1447 aa10.94□□□□□ -0.66
NLRP3-201ENST00000336119 PCDH11XQ9BZA7 1347 aa10.94□□□□□ -0.66
NLRP3-201ENST00000336119 PCDH11YQ9BZA8 1340 aa10.94□□□□□ -0.66
NLRP3-201ENST00000336119 NEURL1BA8MQ27 555 aa10.94□□□□□ -0.66
NLRP3-201ENST00000336119 HMGN5P82970 282 aaKnown RBP10.94□□□□□ -0.66
NLRP3-201ENST00000336119 TFCP2Q12800 502 aa10.94□□□□□ -0.66
NLRP3-201ENST00000336119 NECAB1Q8N987 351 aa10.94□□□□□ -0.66
NLRP3-201ENST00000336119 MPHOSPH8Q99549 860 aa10.94□□□□□ -0.66
NLRP3-201ENST00000336119 PALD1Q9ULE6 856 aa10.94□□□□□ -0.66
NLRP3-201ENST00000336119 F13A1P00488 732 aa10.94□□□□□ -0.66
NLRP3-201ENST00000336119 CEBPZQ03701 1054 aaKnown RBP10.94□□□□□ -0.66
NLRP3-201ENST00000336119 SAFBQ15424 915 aaKnown RBP eCLIP10.94□□□□□ -0.66
NLRP3-201ENST00000336119 RUFY3Q7L099 469 aa10.94□□□□□ -0.66
NLRP3-201ENST00000336119 LMBRD1Q9NUN5 540 aa10.94□□□□□ -0.66
NLRP3-201ENST00000336119 HSP90AA2PQ14568 343 aaPredicted RBP10.93□□□□□ -0.66
NLRP3-201ENST00000336119 MAP3K11Q16584 847 aa10.93□□□□□ -0.66
NLRP3-201ENST00000336119 PROSER3Q2NL68 480 aa10.93□□□□□ -0.66
NLRP3-201ENST00000336119 UNC5CLQ8IV45 518 aa10.93□□□□□ -0.66
NLRP3-201ENST00000336119 HSPA1LP34931 641 aa10.93□□□□□ -0.66
NLRP3-201ENST00000336119 BRD1O95696 1058 aa10.93□□□□□ -0.66
NLRP3-201ENST00000336119 STK38Q15208 465 aa10.93□□□□□ -0.66
NLRP3-201ENST00000336119 TM6SF1Q9BZW5 370 aa10.93□□□□□ -0.66
NLRP3-201ENST00000336119 ERBB3P21860 1342 aa10.93□□□□□ -0.66
NLRP3-201ENST00000336119 DIP2AQ14689 1571 aa10.92□□□□□ -0.66
NLRP3-201ENST00000336119 ANKRD18BA2A2Z9 1011 aa10.92□□□□□ -0.66
NLRP3-201ENST00000336119 EXOC5O00471 708 aa10.92□□□□□ -0.66
NLRP3-201ENST00000336119 PRIM1P49642 420 aaKnown RBP10.92□□□□□ -0.66
NLRP3-201ENST00000336119 SART3Q15020 963 aaKnown RBP10.92□□□□□ -0.66
NLRP3-201ENST00000336119 KLHDC4Q8TBB5 520 aa10.92□□□□□ -0.66
NLRP3-201ENST00000336119 KIF2CQ99661 725 aa10.92□□□□□ -0.66
NLRP3-201ENST00000336119 R3HCC1Q9Y3T6 440 aaKnown RBP10.92□□□□□ -0.66
NLRP3-201ENST00000336119 USP16Q9Y5T5 823 aa10.92□□□□□ -0.66
NLRP3-201ENST00000336119 SYT1P21579 422 aa10.92□□□□□ -0.66
NLRP3-201ENST00000336119 ZNF445P59923 1031 aa10.92□□□□□ -0.66
NLRP3-201ENST00000336119 TNNI3KQ59H18 835 aa10.92□□□□□ -0.66
NLRP3-201ENST00000336119 TCEANC2Q96MN5 208 aa10.92□□□□□ -0.66
NLRP3-201ENST00000336119 TRIM5Q9C035 493 aa10.92□□□□□ -0.66
NLRP3-201ENST00000336119 NAT10Q9H0A0 1025 aaKnown RBP10.92□□□□□ -0.66
NLRP3-201ENST00000336119 CNPY2Q9Y2B0 182 aa10.92□□□□□ -0.66
NLRP3-201ENST00000336119 FPGT-TNNI3KV9GXZ4 949 aa10.92□□□□□ -0.66
NLRP3-201ENST00000336119 NCAPD2Q15021 1401 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms