RNA–Protein interactions for RNA: ENST00000335798.8

UBE2E2-201, Transcript of ubiquitin conjugating enzyme E2 E2, humanhuman

TSL 1 (best)

Gene UBE2E2, Length 1,330 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E2-201ENST00000335798 NEXNQ0ZGT2 675 aa24.68■■□□□ 1.54
UBE2E2-201ENST00000335798 CWF19L2Q2TBE0 894 aaKnown RBP24.68■■□□□ 1.54
UBE2E2-201ENST00000335798 ZKSCAN2Q63HK3 967 aa24.68■■□□□ 1.54
UBE2E2-201ENST00000335798 CCDC191Q8NCU4 936 aa24.68■■□□□ 1.54
UBE2E2-201ENST00000335798 COL11A2P13942 1736 aaPredicted RBP24.68■■□□□ 1.54
UBE2E2-201ENST00000335798 PRR5LQ6MZQ0 368 aa24.67■■□□□ 1.54
UBE2E2-201ENST00000335798 SLC4A10Q6U841 1118 aa24.66■■□□□ 1.54
UBE2E2-201ENST00000335798 NBPF5PQ86XG9 351 aaPredicted RBP24.66■■□□□ 1.54
UBE2E2-201ENST00000335798 BRCA1P38398 1863 aaKnown RBP24.66■■□□□ 1.54
UBE2E2-201ENST00000335798 RIC1Q4ADV7 1423 aa24.66■■□□□ 1.54
UBE2E2-201ENST00000335798 RNF123Q5XPI4 1314 aa24.66■■□□□ 1.54
UBE2E2-201ENST00000335798 ABCC12Q96J65 1359 aa24.65■■□□□ 1.54
UBE2E2-201ENST00000335798 PPP1R42Q7Z4L9 355 aa24.65■■□□□ 1.54
UBE2E2-201ENST00000335798 CNBD1Q8NA66 436 aa24.65■■□□□ 1.54
UBE2E2-201ENST00000335798 NYXQ9GZU5 481 aa24.65■■□□□ 1.54
UBE2E2-201ENST00000335798 CWC25Q9NXE8 425 aaPredicted RBP24.65■■□□□ 1.54
UBE2E2-201ENST00000335798 TPTE2Q6XPS3 522 aa24.64■■□□□ 1.54
UBE2E2-201ENST00000335798 UTP14AQ9BVJ6 771 aaKnown RBP24.64■■□□□ 1.54
UBE2E2-201ENST00000335798 FAM177BA6PVY3 158 aa24.63■■□□□ 1.53
UBE2E2-201ENST00000335798 ALDH1L1O75891 902 aa24.63■■□□□ 1.53
UBE2E2-201ENST00000335798 GCKRQ14397 625 aa24.63■■□□□ 1.53
UBE2E2-201ENST00000335798 SRCIN1Q9C0H9 1055 aa24.63■■□□□ 1.53
UBE2E2-201ENST00000335798 NUTM1Q86Y26 1132 aa24.62■■□□□ 1.53
UBE2E2-201ENST00000335798 ERFEQ4G0M1 354 aa24.61■■□□□ 1.53
UBE2E2-201ENST00000335798 INTS3Q68E01 1043 aaKnown RBP24.61■■□□□ 1.53
UBE2E2-201ENST00000335798 ZBTB38Q8NAP3 1195 aaPredicted RBP24.61■■□□□ 1.53
UBE2E2-201ENST00000335798 TRMT112Q9UI30 125 aaKnown RBP24.61■■□□□ 1.53
UBE2E2-201ENST00000335798 SH3TC1Q8TE82 1336 aa24.61■■□□□ 1.53
UBE2E2-201ENST00000335798 PLIN1O60240 522 aa24.61■■□□□ 1.53
UBE2E2-201ENST00000335798 PCCAP05165 728 aaPredicted RBP24.61■■□□□ 1.53
UBE2E2-201ENST00000335798 RLBP1P12271 317 aa24.61■■□□□ 1.53
UBE2E2-201ENST00000335798 CCT4P50991 539 aaKnown RBP24.61■■□□□ 1.53
UBE2E2-201ENST00000335798 SYNE4Q8N205 404 aa24.61■■□□□ 1.53
UBE2E2-201ENST00000335798 CCDC24Q8N4L8 307 aa24.61■■□□□ 1.53
UBE2E2-201ENST00000335798 CLUAP1Q96AJ1 413 aa24.61■■□□□ 1.53
UBE2E2-201ENST00000335798 SRCAPQ6ZRS2 3230 aa24.6■■□□□ 1.53
UBE2E2-201ENST00000335798 CASP7P55210 303 aa24.6■■□□□ 1.53
UBE2E2-201ENST00000335798 SLC10A5Q5PT55 438 aa24.6■■□□□ 1.53
UBE2E2-201ENST00000335798 FAM89AQ96GI7 184 aa24.6■■□□□ 1.53
UBE2E2-201ENST00000335798 H7C1W4 665 aa24.59■■□□□ 1.53
UBE2E2-201ENST00000335798 ST5P78524 1137 aa24.59■■□□□ 1.53
UBE2E2-201ENST00000335798 DZIP1LQ8IYY4 767 aaKnown RBP24.59■■□□□ 1.53
UBE2E2-201ENST00000335798 CD2APQ9Y5K6 639 aa24.59■■□□□ 1.53
UBE2E2-201ENST00000335798 UTYO14607 1347 aa24.58■■□□□ 1.53
UBE2E2-201ENST00000335798 CDHR2Q9BYE9 1310 aa24.58■■□□□ 1.53
UBE2E2-201ENST00000335798 CACNA1SQ13698 1873 aa24.58■■□□□ 1.53
UBE2E2-201ENST00000335798 TMEM57Q8N5G2 664 aa24.58■■□□□ 1.52
UBE2E2-201ENST00000335798 BRIP1Q9BX63 1249 aa24.58■■□□□ 1.52
UBE2E2-201ENST00000335798 KLRG2A4D1S0 409 aaPredicted RBP24.57■■□□□ 1.52
UBE2E2-201ENST00000335798 GRM8O00222 908 aa24.57■■□□□ 1.52
UBE2E2-201ENST00000335798 RRP1P56182 461 aaKnown RBP24.57■■□□□ 1.52
UBE2E2-201ENST00000335798 FHDC1Q9C0D6 1143 aaPredicted RBP24.57■■□□□ 1.52
UBE2E2-201ENST00000335798 TAF1P21675 1872 aa24.56■■□□□ 1.52
UBE2E2-201ENST00000335798 GTF2E1P29083 439 aaPredicted RBP24.56■■□□□ 1.52
UBE2E2-201ENST00000335798 RTL5Q5HYW3 569 aaPredicted RBP24.56■■□□□ 1.52
UBE2E2-201ENST00000335798 UBE3BQ7Z3V4 1068 aa24.56■■□□□ 1.52
UBE2E2-201ENST00000335798 JARID2Q92833 1246 aaPredicted RBP24.56■■□□□ 1.52
UBE2E2-201ENST00000335798 USP44Q9H0E7 712 aa24.56■■□□□ 1.52
UBE2E2-201ENST00000335798 PPP1R1BQ9UD71 204 aaPredicted RBP24.56■■□□□ 1.52
UBE2E2-201ENST00000335798 NPHP1O15259 732 aa24.55■■□□□ 1.52
UBE2E2-201ENST00000335798 FTSJ3Q8IY81 847 aaKnown RBP24.55■■□□□ 1.52
UBE2E2-201ENST00000335798 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.55■■□□□ 1.52
UBE2E2-201ENST00000335798 PANK1Q8TE04 598 aa24.55■■□□□ 1.52
UBE2E2-201ENST00000335798 C20orf194Q5TEA3 1177 aa24.54■■□□□ 1.52
UBE2E2-201ENST00000335798 C3orf67Q6ZVT6 689 aa24.54■■□□□ 1.52
UBE2E2-201ENST00000335798 IRS4O14654 1257 aaPredicted RBP24.53■■□□□ 1.52
UBE2E2-201ENST00000335798 NBPF7P0C2Y1 421 aaPredicted RBP24.53■■□□□ 1.52
UBE2E2-201ENST00000335798 MS4A1P11836 297 aa24.53■■□□□ 1.52
UBE2E2-201ENST00000335798 HCLS1P14317 486 aaPredicted RBP24.53■■□□□ 1.52
UBE2E2-201ENST00000335798 PDE3AQ14432 1141 aa24.53■■□□□ 1.52
UBE2E2-201ENST00000335798 CRY2Q49AN0 593 aa24.53■■□□□ 1.52
UBE2E2-201ENST00000335798 PDE6BP35913 854 aa24.52■■□□□ 1.52
UBE2E2-201ENST00000335798 TGFB2P61812 414 aa24.52■■□□□ 1.52
UBE2E2-201ENST00000335798 NLGN2Q8NFZ4 835 aa24.52■■□□□ 1.52
UBE2E2-201ENST00000335798 SYT17Q9BSW7 474 aa24.52■■□□□ 1.52
UBE2E2-201ENST00000335798 PLA2G12BQ9BX93 195 aa24.52■■□□□ 1.52
UBE2E2-201ENST00000335798 C9orf78Q9NZ63 289 aaPredicted RBP24.52■■□□□ 1.52
UBE2E2-201ENST00000335798 COL4A1P02462 1669 aa24.51■■□□□ 1.51
UBE2E2-201ENST00000335798 ARFGEF1Q9Y6D6 1849 aa24.5■■□□□ 1.51
UBE2E2-201ENST00000335798 KCNA3P22001 575 aa24.5■■□□□ 1.51
UBE2E2-201ENST00000335798 KLHL34Q8N239 644 aa24.5■■□□□ 1.51
UBE2E2-201ENST00000335798 KAZALD1Q96I82 304 aa24.5■■□□□ 1.51
UBE2E2-201ENST00000335798 MEIS3Q99687 375 aa24.5■■□□□ 1.51
UBE2E2-201ENST00000335798 PDE8AO60658 829 aa24.49■■□□□ 1.51
UBE2E2-201ENST00000335798 SRGNP10124 158 aa24.49■■□□□ 1.51
UBE2E2-201ENST00000335798 CHRNA5P30532 468 aa24.49■■□□□ 1.51
UBE2E2-201ENST00000335798 NLRP3Q96P20 1036 aa24.49■■□□□ 1.51
UBE2E2-201ENST00000335798 PDZRN3Q9UPQ7 1066 aa24.49■■□□□ 1.51
UBE2E2-201ENST00000335798 SLX4Q8IY92 1834 aa24.48■■□□□ 1.51
UBE2E2-201ENST00000335798 SPEF2Q9C093 1822 aa24.48■■□□□ 1.51
UBE2E2-201ENST00000335798 DPEP1P16444 411 aa24.48■■□□□ 1.51
UBE2E2-201ENST00000335798 MVPQ14764 893 aaKnown RBP24.48■■□□□ 1.51
UBE2E2-201ENST00000335798 SF3B3Q15393 1217 aaKnown RBP24.48■■□□□ 1.51
UBE2E2-201ENST00000335798 SUPT16HQ9Y5B9 1047 aaKnown RBP24.48■■□□□ 1.51
UBE2E2-201ENST00000335798 HSP90B1P14625 803 aaKnown RBP24.47■■□□□ 1.51
UBE2E2-201ENST00000335798 FOXO4P98177 505 aa24.47■■□□□ 1.51
UBE2E2-201ENST00000335798 C2CD5Q86YS7 1000 aa24.47■■□□□ 1.51
UBE2E2-201ENST00000335798 ITPRIPQ8IWB1 547 aa24.47■■□□□ 1.51
UBE2E2-201ENST00000335798 SUCLG2Q96I99 432 aa24.47■■□□□ 1.51
UBE2E2-201ENST00000335798 COG6Q9Y2V7 657 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms