RNA–Protein interactions for RNA: ENST00000335643.12

KATNA1-201, Transcript of katanin catalytic subunit A1, humanhuman

TSL 1 (best) BASIC

Gene KATNA1, Length 1,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNA1-201ENST00000335643 SYNE4Q8N205 404 aa19.3■□□□□ 0.68
KATNA1-201ENST00000335643 PLBD2Q8NHP8 589 aa19.3■□□□□ 0.68
KATNA1-201ENST00000335643 ZNF526Q8TF50 670 aaPredicted RBP19.3■□□□□ 0.68
KATNA1-201ENST00000335643 PARP10Q53GL7 1025 aa19.29■□□□□ 0.68
KATNA1-201ENST00000335643 C9orf131Q5VYM1 1079 aa19.29■□□□□ 0.68
KATNA1-201ENST00000335643 DDX60Q8IY21 1712 aaKnown RBP19.28■□□□□ 0.68
KATNA1-201ENST00000335643 NPR1P16066 1061 aa19.28■□□□□ 0.68
KATNA1-201ENST00000335643 TWISTNBQ3B726 338 aaPredicted RBP19.28■□□□□ 0.68
KATNA1-201ENST00000335643 CRY2Q49AN0 593 aa19.28■□□□□ 0.68
KATNA1-201ENST00000335643 OLFM4Q6UX06 510 aa19.28■□□□□ 0.68
KATNA1-201ENST00000335643 SLC51AQ86UW1 340 aa19.28■□□□□ 0.68
KATNA1-201ENST00000335643 ZNF521Q96K83 1311 aa19.28■□□□□ 0.68
KATNA1-201ENST00000335643 PPP1R42Q7Z4L9 355 aa19.27■□□□□ 0.68
KATNA1-201ENST00000335643 C7orf43Q8WVR3 580 aa19.27■□□□□ 0.68
KATNA1-201ENST00000335643 CNKSR1Q969H4 720 aa19.27■□□□□ 0.68
KATNA1-201ENST00000335643 UTP14AQ9BVJ6 771 aaKnown RBP19.27■□□□□ 0.68
KATNA1-201ENST00000335643 TIAM2Q8IVF5 1701 aa19.27■□□□□ 0.68
KATNA1-201ENST00000335643 ATP5J2-PTCD1G3V325 749 aa19.27■□□□□ 0.67
KATNA1-201ENST00000335643 HSP90AB3PQ58FF7 597 aa19.27■□□□□ 0.67
KATNA1-201ENST00000335643 CCDC30Q5VVM6 783 aa19.27■□□□□ 0.67
KATNA1-201ENST00000335643 ISCA1Q9BUE6 129 aa19.27■□□□□ 0.67
KATNA1-201ENST00000335643 RNF181Q9P0P0 153 aa19.27■□□□□ 0.67
KATNA1-201ENST00000335643 EXOSC9Q06265 439 aaKnown RBP19.25■□□□□ 0.67
KATNA1-201ENST00000335643 HCLS1P14317 486 aaPredicted RBP19.24■□□□□ 0.67
KATNA1-201ENST00000335643 G2E3Q7L622 706 aa19.24■□□□□ 0.67
KATNA1-201ENST00000335643 TAF1P21675 1872 aa19.24■□□□□ 0.67
KATNA1-201ENST00000335643 CCER2I3L3R5 266 aa19.23■□□□□ 0.67
KATNA1-201ENST00000335643 SLC10A5Q5PT55 438 aa19.23■□□□□ 0.67
KATNA1-201ENST00000335643 RIC3Q7Z5B4 369 aa19.23■□□□□ 0.67
KATNA1-201ENST00000335643 TRMT112Q9UI30 125 aaKnown RBP19.23■□□□□ 0.67
KATNA1-201ENST00000335643 DICER1Q9UPY3 1922 aaKnown RBP19.23■□□□□ 0.67
KATNA1-201ENST00000335643 SNED1Q8TER0 1413 aa19.23■□□□□ 0.67
KATNA1-201ENST00000335643 VAMP4O75379 141 aa19.23■□□□□ 0.67
KATNA1-201ENST00000335643 GOLGA2Q08379 1002 aa19.23■□□□□ 0.67
KATNA1-201ENST00000335643 GPBP1L1Q9HC44 474 aaPredicted RBP19.23■□□□□ 0.67
KATNA1-201ENST00000335643 COL4A1P02462 1669 aa19.22■□□□□ 0.67
KATNA1-201ENST00000335643 LMNB1P20700 586 aa19.22■□□□□ 0.67
KATNA1-201ENST00000335643 HOXA10P31260 410 aaPredicted RBP19.22■□□□□ 0.67
KATNA1-201ENST00000335643 MYD88Q99836 296 aa19.22■□□□□ 0.67
KATNA1-201ENST00000335643 FAM89AQ96GI7 184 aa19.21■□□□□ 0.67
KATNA1-201ENST00000335643 RNF123Q5XPI4 1314 aa19.21■□□□□ 0.67
KATNA1-201ENST00000335643 SH3TC1Q8TE82 1336 aa19.21■□□□□ 0.67
KATNA1-201ENST00000335643 CEP350Q5VT06 3117 aa19.21■□□□□ 0.67
KATNA1-201ENST00000335643 SLC4A2P04920 1241 aa19.2■□□□□ 0.66
KATNA1-201ENST00000335643 ALDH1B1P30837 517 aa19.2■□□□□ 0.66
KATNA1-201ENST00000335643 RTL5Q5HYW3 569 aaPredicted RBP19.2■□□□□ 0.66
KATNA1-201ENST00000335643 RPGRQ92834 1020 aaKnown RBP19.2■□□□□ 0.66
KATNA1-201ENST00000335643 NLRP3Q96P20 1036 aa19.2■□□□□ 0.66
KATNA1-201ENST00000335643 PI4KAP2A4QPH2 592 aa19.19■□□□□ 0.66
KATNA1-201ENST00000335643 TRIM28Q13263 835 aaKnown RBP19.19■□□□□ 0.66
KATNA1-201ENST00000335643 PI4KAP1Q8N8J0 262 aa19.19■□□□□ 0.66
KATNA1-201ENST00000335643 STK31Q9BXU1 1019 aa19.19■□□□□ 0.66
KATNA1-201ENST00000335643 TAOK3Q9H2K8 898 aa19.19■□□□□ 0.66
KATNA1-201ENST00000335643 MAP3K2Q9Y2U5 619 aa19.19■□□□□ 0.66
KATNA1-201ENST00000335643 ABCC4O15439 1325 aa19.19■□□□□ 0.66
KATNA1-201ENST00000335643 LTBP3Q9NS15 1303 aa19.19■□□□□ 0.66
KATNA1-201ENST00000335643 CCDC93Q567U6 631 aa19.19■□□□□ 0.66
KATNA1-201ENST00000335643 DIEXFQ68CQ4 756 aaKnown RBP19.19■□□□□ 0.66
KATNA1-201ENST00000335643 MIER1Q8N108 512 aa19.19■□□□□ 0.66
KATNA1-201ENST00000335643 CACNA1FO60840 1977 aa19.18■□□□□ 0.66
KATNA1-201ENST00000335643 KIF3CO14782 793 aa19.18■□□□□ 0.66
KATNA1-201ENST00000335643 RBM17Q96I25 401 aaKnown RBP19.18■□□□□ 0.66
KATNA1-201ENST00000335643 METTL22Q9BUU2 404 aaPredicted RBP19.18■□□□□ 0.66
KATNA1-201ENST00000335643 MYH16Q9H6N6 1097 aa19.18■□□□□ 0.66
KATNA1-201ENST00000335643 NMRK2Q9NPI5 230 aa19.18■□□□□ 0.66
KATNA1-201ENST00000335643 IGKV5-2P06315 115 aa19.17■□□□□ 0.66
KATNA1-201ENST00000335643 KSR2Q6VAB6 950 aa19.17■□□□□ 0.66
KATNA1-201ENST00000335643 JARID2Q92833 1246 aaPredicted RBP19.17■□□□□ 0.66
KATNA1-201ENST00000335643 CRAMP1Q96RY5 1269 aa19.17■□□□□ 0.66
KATNA1-201ENST00000335643 CHMP4AQ9BY43 222 aa19.17■□□□□ 0.66
KATNA1-201ENST00000335643 FLIIQ13045 1269 aa19.16■□□□□ 0.66
KATNA1-201ENST00000335643 SOGA3Q5TF21 947 aa19.16■□□□□ 0.66
KATNA1-201ENST00000335643 DDX58O95786 925 aaKnown RBP19.15■□□□□ 0.66
KATNA1-201ENST00000335643 C1QTNF8P60827 252 aa19.15■□□□□ 0.66
KATNA1-201ENST00000335643 ZNF277Q9NRM2 450 aaPredicted RBP19.15■□□□□ 0.66
KATNA1-201ENST00000335643 COL4A5P29400 1685 aa19.15■□□□□ 0.66
KATNA1-201ENST00000335643 PPEF1O14829 653 aaPredicted RBP19.15■□□□□ 0.66
KATNA1-201ENST00000335643 FKBP4Q02790 459 aaKnown RBP eCLIP19.15■□□□□ 0.66
KATNA1-201ENST00000335643 CWF19L2Q2TBE0 894 aaKnown RBP19.15■□□□□ 0.66
KATNA1-201ENST00000335643 CDCA7LQ96GN5 454 aa19.15■□□□□ 0.66
KATNA1-201ENST00000335643 IRS4O14654 1257 aaPredicted RBP19.14■□□□□ 0.65
KATNA1-201ENST00000335643 ZBTB38Q8NAP3 1195 aaPredicted RBP19.14■□□□□ 0.65
KATNA1-201ENST00000335643 CCDC191Q8NCU4 936 aa19.14■□□□□ 0.65
KATNA1-201ENST00000335643 ZC3H4Q9UPT8 1303 aaKnown RBP19.13■□□□□ 0.65
KATNA1-201ENST00000335643 LRRC37AA6NMS7 1700 aa19.13■□□□□ 0.65
KATNA1-201ENST00000335643 CWC25Q9NXE8 425 aaPredicted RBP19.13■□□□□ 0.65
KATNA1-201ENST00000335643 SLFN5Q08AF3 891 aa19.12■□□□□ 0.65
KATNA1-201ENST00000335643 FKBP5Q13451 457 aaPredicted RBP19.12■□□□□ 0.65
KATNA1-201ENST00000335643 RTKN2Q8IZC4 609 aa19.12■□□□□ 0.65
KATNA1-201ENST00000335643 PCCAP05165 728 aaPredicted RBP19.11■□□□□ 0.65
KATNA1-201ENST00000335643 SF3B3Q15393 1217 aaKnown RBP19.11■□□□□ 0.65
KATNA1-201ENST00000335643 GLTPD2A6NH11 291 aa19.1■□□□□ 0.65
KATNA1-201ENST00000335643 NEURL1BA8MQ27 555 aa19.1■□□□□ 0.65
KATNA1-201ENST00000335643 GRAPQ13588 217 aa19.1■□□□□ 0.65
KATNA1-201ENST00000335643 GRAPLQ8TC17 118 aaPredicted RBP19.1■□□□□ 0.65
KATNA1-201ENST00000335643 CELF1Q92879 486 aaKnown RBP19.1■□□□□ 0.65
KATNA1-201ENST00000335643 RRAGCQ9HB90 399 aa19.1■□□□□ 0.65
KATNA1-201ENST00000335643 ATP6V0A2Q9Y487 856 aa19.1■□□□□ 0.65
KATNA1-201ENST00000335643 E9PSI1 815 aa19.1■□□□□ 0.65
KATNA1-201ENST00000335643 DDX46Q7L014 1031 aaKnown RBP19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms