RNA–Protein interactions for RNA: ENST00000333486.3

UBA7-201, Transcript of ubiquitin like modifier activating enzyme 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA7, Length 3,299 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA7-201ENST00000333486 RGPD5Q99666 1765 aa12.93□□□□□ -0.34
UBA7-201ENST00000333486 NEURL1BA8MQ27 555 aa12.93□□□□□ -0.34
UBA7-201ENST00000333486 NGLY1Q96IV0 654 aa12.93□□□□□ -0.34
UBA7-201ENST00000333486 HDAC5Q9UQL6 1122 aa12.93□□□□□ -0.34
UBA7-201ENST00000333486 SOS2Q07890 1332 aaPredicted RBP12.92□□□□□ -0.34
UBA7-201ENST00000333486 TTC41PQ6P2S7 1318 aa12.92□□□□□ -0.34
UBA7-201ENST00000333486 BRD1O95696 1058 aa12.92□□□□□ -0.34
UBA7-201ENST00000333486 PDE4CQ08493 712 aa12.92□□□□□ -0.34
UBA7-201ENST00000333486 MTX1Q13505 466 aa12.92□□□□□ -0.34
UBA7-201ENST00000333486 CUL4AQ13619 759 aa12.92□□□□□ -0.34
UBA7-201ENST00000333486 TMEM63CQ9P1W3 806 aa12.92□□□□□ -0.34
UBA7-201ENST00000333486 MED1Q15648 1581 aaPredicted RBP12.92□□□□□ -0.34
UBA7-201ENST00000333486 GCKRQ14397 625 aa12.92□□□□□ -0.34
UBA7-201ENST00000333486 CCDC83Q8IWF9 413 aa12.92□□□□□ -0.34
UBA7-201ENST00000333486 ISY1Q9ULR0 285 aaKnown RBP12.92□□□□□ -0.34
UBA7-201ENST00000333486 KDM3BQ7LBC6 1761 aa12.91□□□□□ -0.34
UBA7-201ENST00000333486 NMIQ13287 307 aaPredicted RBP12.91□□□□□ -0.34
UBA7-201ENST00000333486 NCAPD2Q15021 1401 aa12.91□□□□□ -0.34
UBA7-201ENST00000333486 LARGE1O95461 756 aa12.91□□□□□ -0.34
UBA7-201ENST00000333486 SNRPA1P09661 255 aaKnown RBP12.91□□□□□ -0.34
UBA7-201ENST00000333486 RUFY3Q7L099 469 aa12.91□□□□□ -0.34
UBA7-201ENST00000333486 KDM6AO15550 1401 aaPredicted RBP12.91□□□□□ -0.34
UBA7-201ENST00000333486 MEGF6O75095 1541 aa12.91□□□□□ -0.34
UBA7-201ENST00000333486 A0A087WZG4 1122 aa12.91□□□□□ -0.34
UBA7-201ENST00000333486 USP54Q70EL1 1684 aa12.91□□□□□ -0.34
UBA7-201ENST00000333486 EVI5LQ96CN4 794 aa12.91□□□□□ -0.34
UBA7-201ENST00000333486 DNAJC2Q99543 621 aaKnown RBP12.91□□□□□ -0.34
UBA7-201ENST00000333486 GADD45BO75293 160 aaPredicted RBP12.9□□□□□ -0.34
UBA7-201ENST00000333486 CHGBP05060 677 aa12.9□□□□□ -0.34
UBA7-201ENST00000333486 NECAB1Q8N987 351 aa12.9□□□□□ -0.34
UBA7-201ENST00000333486 ZCRB1Q8TBF4 217 aaKnown RBP12.9□□□□□ -0.34
UBA7-201ENST00000333486 FMNL2Q96PY5 1086 aa12.9□□□□□ -0.34
UBA7-201ENST00000333486 RBSNQ9H1K0 784 aa12.9□□□□□ -0.34
UBA7-201ENST00000333486 SMC3Q9UQE7 1217 aa12.9□□□□□ -0.34
UBA7-201ENST00000333486 ERBB4Q15303 1308 aa12.9□□□□□ -0.34
UBA7-201ENST00000333486 COL9A3Q14050 684 aaPredicted RBP12.9□□□□□ -0.34
UBA7-201ENST00000333486 INTS4Q96HW7 963 aaKnown RBP12.9□□□□□ -0.34
UBA7-201ENST00000333486 METTL22Q9BUU2 404 aaPredicted RBP12.9□□□□□ -0.34
UBA7-201ENST00000333486 PDRG1Q9NUG6 133 aa12.9□□□□□ -0.34
UBA7-201ENST00000333486 LIMCH1Q9UPQ0 1083 aa12.9□□□□□ -0.34
UBA7-201ENST00000333486 RBM8AQ9Y5S9 174 aaKnown RBP12.9□□□□□ -0.34
UBA7-201ENST00000333486 LMO7Q8WWI1 1683 aa12.9□□□□□ -0.34
UBA7-201ENST00000333486 HEG1Q9ULI3 1381 aa12.89□□□□□ -0.35
UBA7-201ENST00000333486 A0A0D9SFI3 127 aa12.89□□□□□ -0.35
UBA7-201ENST00000333486 NAP1L5Q96NT1 182 aaPredicted RBP12.89□□□□□ -0.35
UBA7-201ENST00000333486 ESPNB1AK53 854 aa12.89□□□□□ -0.35
UBA7-201ENST00000333486 ZKSCAN1P17029 563 aaPredicted RBP12.89□□□□□ -0.35
UBA7-201ENST00000333486 KCNQ4P56696 695 aa12.89□□□□□ -0.35
UBA7-201ENST00000333486 DCAF5Q96JK2 942 aa12.89□□□□□ -0.35
UBA7-201ENST00000333486 SLIT3O75094 1523 aa12.89□□□□□ -0.35
UBA7-201ENST00000333486 FIBPO43427 364 aa12.89□□□□□ -0.35
UBA7-201ENST00000333486 TFCP2Q12800 502 aa12.89□□□□□ -0.35
UBA7-201ENST00000333486 VPS37CA5D8V6 355 aaPredicted RBP12.88□□□□□ -0.35
UBA7-201ENST00000333486 IL2RBP14784 551 aa12.88□□□□□ -0.35
UBA7-201ENST00000333486 MEX3CQ5U5Q3 659 aaKnown RBP12.88□□□□□ -0.35
UBA7-201ENST00000333486 ZBTB3Q9H5J0 574 aa12.88□□□□□ -0.35
UBA7-201ENST00000333486 CYP46A1Q9Y6A2 500 aa12.88□□□□□ -0.35
UBA7-201ENST00000333486 WDR33Q9C0J8 1336 aaKnown RBP12.88□□□□□ -0.35
UBA7-201ENST00000333486 USP48Q86UV5 1035 aa12.88□□□□□ -0.35
UBA7-201ENST00000333486 NEUROD6Q96NK8 337 aa12.88□□□□□ -0.35
UBA7-201ENST00000333486 CNPY2Q9Y2B0 182 aa12.88□□□□□ -0.35
UBA7-201ENST00000333486 CCDC171Q6TFL3 1326 aa12.88□□□□□ -0.35
UBA7-201ENST00000333486 TTC14Q96N46 770 aa12.87□□□□□ -0.35
UBA7-201ENST00000333486 TAF6LQ9Y6J9 622 aa12.87□□□□□ -0.35
UBA7-201ENST00000333486 PDIA4P13667 645 aaKnown RBP12.87□□□□□ -0.35
UBA7-201ENST00000333486 SYT1P21579 422 aa12.87□□□□□ -0.35
UBA7-201ENST00000333486 STK3Q13188 491 aa12.87□□□□□ -0.35
UBA7-201ENST00000333486 CCDC85AQ96PX6 553 aaPredicted RBP12.87□□□□□ -0.35
UBA7-201ENST00000333486 WDR17Q8IZU2 1322 aa12.87□□□□□ -0.35
UBA7-201ENST00000333486 A1BGP04217 495 aa12.87□□□□□ -0.35
UBA7-201ENST00000333486 ZNF445P59923 1031 aa12.87□□□□□ -0.35
UBA7-201ENST00000333486 FAM98CQ17RN3 349 aaKnown RBP12.87□□□□□ -0.35
UBA7-201ENST00000333486 CREB3L3Q68CJ9 461 aa12.87□□□□□ -0.35
UBA7-201ENST00000333486 LMBR1LQ6UX01 489 aa12.87□□□□□ -0.35
UBA7-201ENST00000333486 GJB2P29033 226 aa12.86□□□□□ -0.35
UBA7-201ENST00000333486 TTLL7Q6ZT98 887 aa12.86□□□□□ -0.35
UBA7-201ENST00000333486 DDX46Q7L014 1031 aaKnown RBP12.86□□□□□ -0.35
UBA7-201ENST00000333486 ZNF589Q86UQ0 364 aaPredicted RBP12.86□□□□□ -0.35
UBA7-201ENST00000333486 TUBGCP6Q96RT7 1819 aa12.86□□□□□ -0.35
UBA7-201ENST00000333486 USP42Q9H9J4 1324 aaKnown RBP12.86□□□□□ -0.35
UBA7-201ENST00000333486 STX6O43752 255 aa12.86□□□□□ -0.35
UBA7-201ENST00000333486 CCDC129Q6ZRS4 1044 aa12.86□□□□□ -0.35
UBA7-201ENST00000333486 FERMT3Q86UX7 667 aa12.86□□□□□ -0.35
UBA7-201ENST00000333486 DBNDD2Q9BQY9 259 aa12.86□□□□□ -0.35
UBA7-201ENST00000333486 DBNLQ9UJU6 430 aaKnown RBP12.86□□□□□ -0.35
UBA7-201ENST00000333486 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.86□□□□□ -0.35
UBA7-201ENST00000333486 MPNDQ8N594 471 aa12.86□□□□□ -0.35
UBA7-201ENST00000333486 UTRNP46939 3433 aa12.85□□□□□ -0.35
UBA7-201ENST00000333486 MBD3O95983 291 aa12.85□□□□□ -0.35
UBA7-201ENST00000333486 CCDC173Q0VFZ6 552 aa12.85□□□□□ -0.35
UBA7-201ENST00000333486 SLFNL1Q499Z3 407 aa12.85□□□□□ -0.35
UBA7-201ENST00000333486 SEC62Q99442 399 aaKnown RBP12.85□□□□□ -0.35
UBA7-201ENST00000333486 DCCP43146 1447 aa12.85□□□□□ -0.35
UBA7-201ENST00000333486 TCHHQ07283 1943 aa12.85□□□□□ -0.35
UBA7-201ENST00000333486 PTPN12Q05209 780 aaKnown RBP12.85□□□□□ -0.35
UBA7-201ENST00000333486 ME3Q16798 604 aa12.84□□□□□ -0.35
UBA7-201ENST00000333486 FAM177BA6PVY3 158 aa12.84□□□□□ -0.35
UBA7-201ENST00000333486 SLC27A2O14975 620 aa12.84□□□□□ -0.35
UBA7-201ENST00000333486 ZSCAN22P10073 491 aaPredicted RBP12.84□□□□□ -0.35
UBA7-201ENST00000333486 NECTIN1Q15223 517 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms