RNA–Protein interactions for RNA: ENST00000333130.3

MRPL40-201, Transcript of mitochondrial ribosomal protein L40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL40, Length 1,387 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-201ENST00000333130 PTPRCP08575 1304 aa26.1■■□□□ 1.77
MRPL40-201ENST00000333130 BRCA1P38398 1863 aaKnown RBP26.1■■□□□ 1.77
MRPL40-201ENST00000333130 ATP5J2-PTCD1G3V325 749 aa26.09■■□□□ 1.77
MRPL40-201ENST00000333130 H0YIN7 160 aa26.09■■□□□ 1.77
MRPL40-201ENST00000333130 NTSR2O95665 410 aa26.09■■□□□ 1.77
MRPL40-201ENST00000333130 DNAAF4Q8WXU2 420 aa26.09■■□□□ 1.77
MRPL40-201ENST00000333130 TRMT112Q9UI30 125 aaKnown RBP26.09■■□□□ 1.77
MRPL40-201ENST00000333130 CCDC191Q8NCU4 936 aa26.08■■□□□ 1.77
MRPL40-201ENST00000333130 RIC1Q4ADV7 1423 aa26.08■■□□□ 1.76
MRPL40-201ENST00000333130 A0A0G2JLW4 131 aa26.07■■□□□ 1.76
MRPL40-201ENST00000333130 DPEP1P16444 411 aa26.07■■□□□ 1.76
MRPL40-201ENST00000333130 NUTM1Q86Y26 1132 aa26.07■■□□□ 1.76
MRPL40-201ENST00000333130 C2CD5Q86YS7 1000 aa26.07■■□□□ 1.76
MRPL40-201ENST00000333130 PELP1Q8IZL8 1130 aaKnown RBP26.07■■□□□ 1.76
MRPL40-201ENST00000333130 CCDC24Q8N4L8 307 aa26.07■■□□□ 1.76
MRPL40-201ENST00000333130 CWC25Q9NXE8 425 aaPredicted RBP26.07■■□□□ 1.76
MRPL40-201ENST00000333130 SH3TC1Q8TE82 1336 aa26.07■■□□□ 1.76
MRPL40-201ENST00000333130 HSP90B1P14625 803 aaKnown RBP26.07■■□□□ 1.76
MRPL40-201ENST00000333130 ERFEQ4G0M1 354 aa26.07■■□□□ 1.76
MRPL40-201ENST00000333130 COL11A2P13942 1736 aaPredicted RBP26.06■■□□□ 1.76
MRPL40-201ENST00000333130 KIF16BQ96L93 1317 aa26.06■■□□□ 1.76
MRPL40-201ENST00000333130 GPR162Q16538 588 aa26.06■■□□□ 1.76
MRPL40-201ENST00000333130 PIM2Q9P1W9 311 aa26.06■■□□□ 1.76
MRPL40-201ENST00000333130 ABCC12Q96J65 1359 aa26.04■■□□□ 1.76
MRPL40-201ENST00000333130 LAMB2P55268 1798 aa26.04■■□□□ 1.76
MRPL40-201ENST00000333130 BCAR3O75815 825 aa26.04■■□□□ 1.76
MRPL40-201ENST00000333130 CHRNA5P30532 468 aa26.04■■□□□ 1.76
MRPL40-201ENST00000333130 TNRC6CQ9HCJ0 1690 aaKnown RBP26.03■■□□□ 1.76
MRPL40-201ENST00000333130 CACNA1SQ13698 1873 aa26.03■■□□□ 1.76
MRPL40-201ENST00000333130 LINS1Q8NG48 757 aa26.03■■□□□ 1.76
MRPL40-201ENST00000333130 RCAN3Q9UKA8 241 aa26.03■■□□□ 1.76
MRPL40-201ENST00000333130 ARFGEF1Q9Y6D6 1849 aa26.02■■□□□ 1.76
MRPL40-201ENST00000333130 ZBTB38Q8NAP3 1195 aaPredicted RBP26.02■■□□□ 1.76
MRPL40-201ENST00000333130 NLRP3Q96P20 1036 aa26.02■■□□□ 1.76
MRPL40-201ENST00000333130 F6X3S4 739 aa26.01■■□□□ 1.75
MRPL40-201ENST00000333130 DALRD3Q5D0E6 543 aaKnown RBP26.01■■□□□ 1.75
MRPL40-201ENST00000333130 ZNF622Q969S3 477 aaKnown RBP eCLIP26.01■■□□□ 1.75
MRPL40-201ENST00000333130 MASTLQ96GX5 879 aa26.01■■□□□ 1.75
MRPL40-201ENST00000333130 DDX60Q8IY21 1712 aaKnown RBP26■■□□□ 1.75
MRPL40-201ENST00000333130 NEURL1BA8MQ27 555 aa26■■□□□ 1.75
MRPL40-201ENST00000333130 SLC4A10Q6U841 1118 aa26■■□□□ 1.75
MRPL40-201ENST00000333130 RPGRQ92834 1020 aaKnown RBP26■■□□□ 1.75
MRPL40-201ENST00000333130 BCS1LQ9Y276 419 aa26■■□□□ 1.75
MRPL40-201ENST00000333130 GOLGB1Q14789 3259 aaKnown RBP25.99■■□□□ 1.75
MRPL40-201ENST00000333130 MYH3P11055 1940 aa25.99■■□□□ 1.75
MRPL40-201ENST00000333130 GRIN3BO60391 1043 aa25.99■■□□□ 1.75
MRPL40-201ENST00000333130 PCCAP05165 728 aaPredicted RBP25.99■■□□□ 1.75
MRPL40-201ENST00000333130 IGKV5-2P06315 115 aa25.99■■□□□ 1.75
MRPL40-201ENST00000333130 SRGNP10124 158 aa25.99■■□□□ 1.75
MRPL40-201ENST00000333130 NPR1P16066 1061 aa25.99■■□□□ 1.75
MRPL40-201ENST00000333130 CWF19L2Q2TBE0 894 aaKnown RBP25.99■■□□□ 1.75
MRPL40-201ENST00000333130 SLC10A5Q5PT55 438 aa25.99■■□□□ 1.75
MRPL40-201ENST00000333130 STYK1Q6J9G0 422 aa25.99■■□□□ 1.75
MRPL40-201ENST00000333130 TTLL6Q8N841 843 aa25.99■■□□□ 1.75
MRPL40-201ENST00000333130 ARHGAP45Q92619 1136 aa25.99■■□□□ 1.75
MRPL40-201ENST00000333130 CNKSR1Q969H4 720 aa25.99■■□□□ 1.75
MRPL40-201ENST00000333130 FAM89AQ96GI7 184 aa25.99■■□□□ 1.75
MRPL40-201ENST00000333130 NOB1Q9ULX3 412 aaKnown RBP25.99■■□□□ 1.75
MRPL40-201ENST00000333130 KLRG2A4D1S0 409 aaPredicted RBP25.98■■□□□ 1.75
MRPL40-201ENST00000333130 IPO8O15397 1037 aaKnown RBP25.98■■□□□ 1.75
MRPL40-201ENST00000333130 KCNA3P22001 575 aa25.98■■□□□ 1.75
MRPL40-201ENST00000333130 API5Q9BZZ5 524 aaKnown RBP25.98■■□□□ 1.75
MRPL40-201ENST00000333130 WWC3Q9ULE0 1092 aa25.98■■□□□ 1.75
MRPL40-201ENST00000333130 RTL5Q5HYW3 569 aaPredicted RBP25.97■■□□□ 1.75
MRPL40-201ENST00000333130 IRS4O14654 1257 aaPredicted RBP25.96■■□□□ 1.75
MRPL40-201ENST00000333130 HCLS1P14317 486 aaPredicted RBP25.96■■□□□ 1.75
MRPL40-201ENST00000333130 CRY2Q49AN0 593 aa25.96■■□□□ 1.75
MRPL40-201ENST00000333130 SRCIN1Q9C0H9 1055 aa25.96■■□□□ 1.75
MRPL40-201ENST00000333130 ALDH1L1O75891 902 aa25.95■■□□□ 1.75
MRPL40-201ENST00000333130 ALDH1B1P30837 517 aa25.95■■□□□ 1.75
MRPL40-201ENST00000333130 GCKRQ14397 625 aa25.95■■□□□ 1.75
MRPL40-201ENST00000333130 BEND3Q5T5X7 828 aa25.95■■□□□ 1.75
MRPL40-201ENST00000333130 RBM17Q96I25 401 aaKnown RBP25.95■■□□□ 1.74
MRPL40-201ENST00000333130 CDHR2Q9BYE9 1310 aa25.94■■□□□ 1.74
MRPL40-201ENST00000333130 YBX3P16989 372 aaKnown RBP eCLIP25.94■■□□□ 1.743e-10■■□□□ 12
MRPL40-201ENST00000333130 CHD4Q14839 1912 aa25.93■■□□□ 1.74
MRPL40-201ENST00000333130 ATF7IPQ6VMQ6 1270 aa25.93■■□□□ 1.74
MRPL40-201ENST00000333130 SYNE4Q8N205 404 aa25.93■■□□□ 1.74
MRPL40-201ENST00000333130 FRAT1Q92837 279 aaPredicted RBP25.93■■□□□ 1.74
MRPL40-201ENST00000333130 ABCC4O15439 1325 aa25.92■■□□□ 1.74
MRPL40-201ENST00000333130 PDE8AO60658 829 aa25.92■■□□□ 1.74
MRPL40-201ENST00000333130 TRIM27P14373 513 aa25.92■■□□□ 1.74
MRPL40-201ENST00000333130 UBE3BQ7Z3V4 1068 aa25.92■■□□□ 1.74
MRPL40-201ENST00000333130 C9orf78Q9NZ63 289 aaPredicted RBP25.92■■□□□ 1.74
MRPL40-201ENST00000333130 CCT4P50991 539 aaKnown RBP25.91■■□□□ 1.74
MRPL40-201ENST00000333130 ZKSCAN2Q63HK3 967 aa25.91■■□□□ 1.74
MRPL40-201ENST00000333130 DDX46Q7L014 1031 aaKnown RBP25.91■■□□□ 1.74
MRPL40-201ENST00000333130 SLX4Q8IY92 1834 aa25.91■■□□□ 1.74
MRPL40-201ENST00000333130 HOXA10P31260 410 aaPredicted RBP25.9■■□□□ 1.74
MRPL40-201ENST00000333130 SOGA3Q5TF21 947 aa25.9■■□□□ 1.74
MRPL40-201ENST00000333130 PRPF40BQ6NWY9 871 aaKnown RBP25.9■■□□□ 1.74
MRPL40-201ENST00000333130 H7C1W4 665 aa25.89■■□□□ 1.74
MRPL40-201ENST00000333130 GRM8O00222 908 aa25.89■■□□□ 1.74
MRPL40-201ENST00000333130 CRAMP1Q96RY5 1269 aa25.89■■□□□ 1.74
MRPL40-201ENST00000333130 SF3B3Q15393 1217 aaKnown RBP25.88■■□□□ 1.73
MRPL40-201ENST00000333130 CCDC152Q4G0S7 254 aa25.88■■□□□ 1.73
MRPL40-201ENST00000333130 TMX4Q9H1E5 349 aaPredicted RBP25.88■■□□□ 1.73
MRPL40-201ENST00000333130 C3orf67Q6ZVT6 689 aa25.87■■□□□ 1.73
MRPL40-201ENST00000333130 JARID2Q92833 1246 aaPredicted RBP25.87■■□□□ 1.73
MRPL40-201ENST00000333130 UTRNP46939 3433 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms