RNA–Protein interactions for RNA: ENST00000328596.10

TNFRSF18-201, Transcript of TNF receptor superfamily member 18, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TNFRSF18, Length 851 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF18-201ENST00000328596 NLRP10Q86W26 655 aa27.03■■□□□ 1.92
TNFRSF18-201ENST00000328596 TNRC6CQ9HCJ0 1690 aaKnown RBP27.03■■□□□ 1.92
TNFRSF18-201ENST00000328596 ARFGEF2Q9Y6D5 1785 aa27.03■■□□□ 1.92
TNFRSF18-201ENST00000328596 RNF123Q5XPI4 1314 aa27.02■■□□□ 1.92
TNFRSF18-201ENST00000328596 NFKBIEO00221 500 aa27.02■■□□□ 1.92
TNFRSF18-201ENST00000328596 CACNA1SQ13698 1873 aa27.02■■□□□ 1.92
TNFRSF18-201ENST00000328596 ALDH1B1P30837 517 aa27.01■■□□□ 1.91
TNFRSF18-201ENST00000328596 SOGA3Q5TF21 947 aa27.01■■□□□ 1.91
TNFRSF18-201ENST00000328596 PHAXQ9H814 394 aaKnown RBP27.01■■□□□ 1.91
TNFRSF18-201ENST00000328596 FANCIQ9NVI1 1328 aa27■■□□□ 1.91
TNFRSF18-201ENST00000328596 LMNB1P20700 586 aa27■■□□□ 1.91
TNFRSF18-201ENST00000328596 TWISTNBQ3B726 338 aaPredicted RBP27■■□□□ 1.91
TNFRSF18-201ENST00000328596 SLC10A5Q5PT55 438 aa27■■□□□ 1.91
TNFRSF18-201ENST00000328596 GOLGA2Q08379 1002 aa26.99■■□□□ 1.91
TNFRSF18-201ENST00000328596 C7orf43Q8WVR3 580 aa26.99■■□□□ 1.91
TNFRSF18-201ENST00000328596 CCER2I3L3R5 266 aa26.98■■□□□ 1.91
TNFRSF18-201ENST00000328596 PRELPP51888 382 aa26.98■■□□□ 1.91
TNFRSF18-201ENST00000328596 RIC3Q7Z5B4 369 aa26.98■■□□□ 1.91
TNFRSF18-201ENST00000328596 RPGRQ92834 1020 aaKnown RBP26.98■■□□□ 1.91
TNFRSF18-201ENST00000328596 NLRP3Q96P20 1036 aa26.98■■□□□ 1.91
TNFRSF18-201ENST00000328596 ISCA1Q9BUE6 129 aa26.98■■□□□ 1.91
TNFRSF18-201ENST00000328596 TRMT112Q9UI30 125 aaKnown RBP26.98■■□□□ 1.91
TNFRSF18-201ENST00000328596 FER1L6Q2WGJ9 1857 aa26.98■■□□□ 1.91
TNFRSF18-201ENST00000328596 HOXA10P31260 410 aaPredicted RBP26.97■■□□□ 1.91
TNFRSF18-201ENST00000328596 LTBP3Q9NS15 1303 aa26.96■■□□□ 1.91
TNFRSF18-201ENST00000328596 STK31Q9BXU1 1019 aa26.96■■□□□ 1.91
TNFRSF18-201ENST00000328596 TAOK3Q9H2K8 898 aa26.96■■□□□ 1.91
TNFRSF18-201ENST00000328596 SH3TC1Q8TE82 1336 aa26.95■■□□□ 1.91
TNFRSF18-201ENST00000328596 ZC3H4Q9UPT8 1303 aaKnown RBP26.95■■□□□ 1.91
TNFRSF18-201ENST00000328596 ATP5J2-PTCD1G3V325 749 aa26.95■■□□□ 1.9
TNFRSF18-201ENST00000328596 CCDC93Q567U6 631 aa26.95■■□□□ 1.9
TNFRSF18-201ENST00000328596 C3orf67Q6ZVT6 689 aa26.95■■□□□ 1.9
TNFRSF18-201ENST00000328596 RBM17Q96I25 401 aaKnown RBP26.95■■□□□ 1.9
TNFRSF18-201ENST00000328596 DDX58O95786 925 aaKnown RBP26.94■■□□□ 1.9
TNFRSF18-201ENST00000328596 TRIM28Q13263 835 aaKnown RBP26.94■■□□□ 1.9
TNFRSF18-201ENST00000328596 SPINK5Q9NQ38 1064 aaPredicted RBP26.94■■□□□ 1.9
TNFRSF18-201ENST00000328596 C1QTNF8P60827 252 aa26.93■■□□□ 1.9
TNFRSF18-201ENST00000328596 SYNE4Q8N205 404 aa26.93■■□□□ 1.9
TNFRSF18-201ENST00000328596 CRAMP1Q96RY5 1269 aa26.93■■□□□ 1.9
TNFRSF18-201ENST00000328596 MYH16Q9H6N6 1097 aa26.93■■□□□ 1.9
TNFRSF18-201ENST00000328596 CCDC88AQ3V6T2 1871 aa26.93■■□□□ 1.9
TNFRSF18-201ENST00000328596 TCERG1O14776 1098 aaKnown RBP26.92■■□□□ 1.9
TNFRSF18-201ENST00000328596 HCLS1P14317 486 aaPredicted RBP26.92■■□□□ 1.9
TNFRSF18-201ENST00000328596 ZNF428Q96B54 188 aa26.92■■□□□ 1.9
TNFRSF18-201ENST00000328596 EXOSC9Q06265 439 aaKnown RBP26.91■■□□□ 1.9
TNFRSF18-201ENST00000328596 RTKN2Q8IZC4 609 aa26.91■■□□□ 1.9
TNFRSF18-201ENST00000328596 MIER1Q8N108 512 aa26.91■■□□□ 1.9
TNFRSF18-201ENST00000328596 ZNF521Q96K83 1311 aa26.9■■□□□ 1.9
TNFRSF18-201ENST00000328596 VAMP4O75379 141 aa26.9■■□□□ 1.9
TNFRSF18-201ENST00000328596 OLFM4Q6UX06 510 aa26.9■■□□□ 1.9
TNFRSF18-201ENST00000328596 MYD88Q99836 296 aa26.9■■□□□ 1.9
TNFRSF18-201ENST00000328596 KDM2BQ8NHM5 1336 aa26.9■■□□□ 1.9
TNFRSF18-201ENST00000328596 SLC4A2P04920 1241 aa26.89■■□□□ 1.9
TNFRSF18-201ENST00000328596 FAM89AQ96GI7 184 aa26.89■■□□□ 1.9
TNFRSF18-201ENST00000328596 METTL22Q9BUU2 404 aaPredicted RBP26.89■■□□□ 1.9
TNFRSF18-201ENST00000328596 KIF3CO14782 793 aa26.88■■□□□ 1.89
TNFRSF18-201ENST00000328596 FKBP4Q02790 459 aaKnown RBP eCLIP26.88■■□□□ 1.89
TNFRSF18-201ENST00000328596 CC2D2BQ6DHV5 1058 aa26.88■■□□□ 1.89
TNFRSF18-201ENST00000328596 KSR2Q6VAB6 950 aa26.88■■□□□ 1.89
TNFRSF18-201ENST00000328596 NMRK2Q9NPI5 230 aa26.87■■□□□ 1.89
TNFRSF18-201ENST00000328596 MAP3K2Q9Y2U5 619 aa26.87■■□□□ 1.89
TNFRSF18-201ENST00000328596 TIAM2Q8IVF5 1701 aa26.87■■□□□ 1.89
TNFRSF18-201ENST00000328596 LAMB2P55268 1798 aa26.86■■□□□ 1.89
TNFRSF18-201ENST00000328596 DICER1Q9UPY3 1922 aaKnown RBP26.86■■□□□ 1.89
TNFRSF18-201ENST00000328596 PI4KAP2A4QPH2 592 aa26.86■■□□□ 1.89
TNFRSF18-201ENST00000328596 PPEF1O14829 653 aaPredicted RBP26.86■■□□□ 1.89
TNFRSF18-201ENST00000328596 G2E3Q7L622 706 aa26.86■■□□□ 1.89
TNFRSF18-201ENST00000328596 PI4KAP1Q8N8J0 262 aa26.86■■□□□ 1.89
TNFRSF18-201ENST00000328596 CCDC191Q8NCU4 936 aa26.86■■□□□ 1.89
TNFRSF18-201ENST00000328596 ZBTB38Q8NAP3 1195 aaPredicted RBP26.85■■□□□ 1.89
TNFRSF18-201ENST00000328596 ABCC4O15439 1325 aa26.85■■□□□ 1.89
TNFRSF18-201ENST00000328596 SNED1Q8TER0 1413 aa26.84■■□□□ 1.89
TNFRSF18-201ENST00000328596 GLTPD2A6NH11 291 aa26.84■■□□□ 1.89
TNFRSF18-201ENST00000328596 GRIPAP1Q4V328 841 aa26.84■■□□□ 1.89
TNFRSF18-201ENST00000328596 RTL5Q5HYW3 569 aaPredicted RBP26.84■■□□□ 1.89
TNFRSF18-201ENST00000328596 DDX60Q8IY21 1712 aaKnown RBP26.84■■□□□ 1.89
TNFRSF18-201ENST00000328596 IRS4O14654 1257 aaPredicted RBP26.83■■□□□ 1.89
TNFRSF18-201ENST00000328596 FLIIQ13045 1269 aa26.83■■□□□ 1.89
TNFRSF18-201ENST00000328596 DDX46Q7L014 1031 aaKnown RBP26.83■■□□□ 1.89
TNFRSF18-201ENST00000328596 PSMD1Q99460 953 aa26.83■■□□□ 1.89
TNFRSF18-201ENST00000328596 CWC25Q9NXE8 425 aaPredicted RBP26.83■■□□□ 1.89
TNFRSF18-201ENST00000328596 CACNA1FO60840 1977 aa26.82■■□□□ 1.88
TNFRSF18-201ENST00000328596 BBOX1O75936 387 aa26.82■■□□□ 1.88
TNFRSF18-201ENST00000328596 ZNF277Q9NRM2 450 aaPredicted RBP26.82■■□□□ 1.88
TNFRSF18-201ENST00000328596 PCCAP05165 728 aaPredicted RBP26.81■■□□□ 1.88
TNFRSF18-201ENST00000328596 NEXNQ0ZGT2 675 aa26.81■■□□□ 1.88
TNFRSF18-201ENST00000328596 SF3B3Q15393 1217 aaKnown RBP26.81■■□□□ 1.88
TNFRSF18-201ENST00000328596 DPY19L2Q6NUT2 758 aa26.81■■□□□ 1.88
TNFRSF18-201ENST00000328596 TMX4Q9H1E5 349 aaPredicted RBP26.81■■□□□ 1.88
TNFRSF18-201ENST00000328596 ATP6V0A2Q9Y487 856 aa26.81■■□□□ 1.88
TNFRSF18-201ENST00000328596 HSP90B1P14625 803 aaKnown RBP26.8■■□□□ 1.88
TNFRSF18-201ENST00000328596 GRAPQ13588 217 aa26.8■■□□□ 1.88
TNFRSF18-201ENST00000328596 GRAPLQ8TC17 118 aaPredicted RBP26.8■■□□□ 1.88
TNFRSF18-201ENST00000328596 RRAGCQ9HB90 399 aa26.8■■□□□ 1.88
TNFRSF18-201ENST00000328596 IGKV5-2P06315 115 aa26.79■■□□□ 1.88
TNFRSF18-201ENST00000328596 IARSP41252 1262 aaKnown RBP26.79■■□□□ 1.88
TNFRSF18-201ENST00000328596 FKBP5Q13451 457 aaPredicted RBP26.79■■□□□ 1.88
TNFRSF18-201ENST00000328596 E9PSI1 815 aa26.78■■□□□ 1.88
TNFRSF18-201ENST00000328596 SLC51AQ86UW1 340 aa26.78■■□□□ 1.88
TNFRSF18-201ENST00000328596 TOMM70O94826 608 aa26.77■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms