RNA–Protein interactions for RNA: ENST00000328514.11

GINS3-202, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-202ENST00000328514 MRFAP1L1Q96HT8 127 aa13.35□□□□□ -0.27
GINS3-202ENST00000328514 TRIM5Q9C035 493 aa13.35□□□□□ -0.27
GINS3-202ENST00000328514 DACT1Q9NYF0 836 aa13.35□□□□□ -0.27
GINS3-202ENST00000328514 SPG7Q9UQ90 795 aa13.35□□□□□ -0.27
GINS3-202ENST00000328514 ZNF335Q9H4Z2 1342 aaPredicted RBP13.35□□□□□ -0.27
GINS3-202ENST00000328514 METP08581 1390 aa13.35□□□□□ -0.27
GINS3-202ENST00000328514 IGSF1Q8N6C5 1336 aa13.34□□□□□ -0.27
GINS3-202ENST00000328514 NCKAP5LQ9HCH0 1330 aa13.34□□□□□ -0.27
GINS3-202ENST00000328514 PIP4K2BP78356 416 aa13.34□□□□□ -0.27
GINS3-202ENST00000328514 ADCK5Q3MIX3 580 aa13.34□□□□□ -0.27
GINS3-202ENST00000328514 KRT222Q8N1A0 295 aa13.34□□□□□ -0.27
GINS3-202ENST00000328514 LARP6Q9BRS8 491 aaKnown RBP13.34□□□□□ -0.27
GINS3-202ENST00000328514 NRBP1Q9UHY1 535 aa13.34□□□□□ -0.27
GINS3-202ENST00000328514 USP6P35125 1406 aa13.33□□□□□ -0.27
GINS3-202ENST00000328514 CPA1P15085 419 aa13.33□□□□□ -0.28
GINS3-202ENST00000328514 PTH1RQ03431 593 aa13.33□□□□□ -0.28
GINS3-202ENST00000328514 CEP135Q66GS9 1140 aa13.33□□□□□ -0.28
GINS3-202ENST00000328514 TPCN1Q9ULQ1 816 aa13.33□□□□□ -0.28
GINS3-202ENST00000328514 SBNO1A3KN83 1393 aa13.33□□□□□ -0.28
GINS3-202ENST00000328514 FLT4P35916 1363 aa13.33□□□□□ -0.28
GINS3-202ENST00000328514 MAP4K4O95819 1239 aaPredicted RBP13.33□□□□□ -0.28
GINS3-202ENST00000328514 ZKSCAN1P17029 563 aaPredicted RBP13.33□□□□□ -0.28
GINS3-202ENST00000328514 ZNF165P49910 485 aa13.33□□□□□ -0.28
GINS3-202ENST00000328514 MTX1Q13505 466 aa13.33□□□□□ -0.28
GINS3-202ENST00000328514 ANKRD1Q15327 319 aa13.33□□□□□ -0.28
GINS3-202ENST00000328514 CDC37L1Q7L3B6 337 aa13.33□□□□□ -0.28
GINS3-202ENST00000328514 DRC7Q8IY82 874 aa13.33□□□□□ -0.28
GINS3-202ENST00000328514 LEO1Q8WVC0 666 aaPredicted RBP13.33□□□□□ -0.28
GINS3-202ENST00000328514 CLIP2Q9UDT6 1046 aa13.33□□□□□ -0.28
GINS3-202ENST00000328514 A0A0U1RQG5 324 aaPredicted RBP13.32□□□□□ -0.28
GINS3-202ENST00000328514 PSMA5P28066 241 aa13.32□□□□□ -0.28
GINS3-202ENST00000328514 CAMK4Q16566 473 aa13.32□□□□□ -0.28
GINS3-202ENST00000328514 TPD52L1Q16890 204 aaPredicted RBP13.32□□□□□ -0.28
GINS3-202ENST00000328514 PRPF40BQ6NWY9 871 aaKnown RBP13.32□□□□□ -0.28
GINS3-202ENST00000328514 LRRC8AQ8IWT6 810 aa13.32□□□□□ -0.28
GINS3-202ENST00000328514 ERO1AQ96HE7 468 aa13.32□□□□□ -0.28
GINS3-202ENST00000328514 CCDC66A2RUB6 948 aa13.31□□□□□ -0.28
GINS3-202ENST00000328514 KIF2AO00139 706 aaPredicted RBP13.31□□□□□ -0.28
GINS3-202ENST00000328514 SRGAP3O43295 1099 aa13.31□□□□□ -0.28
GINS3-202ENST00000328514 IQCB1Q15051 598 aa13.31□□□□□ -0.28
GINS3-202ENST00000328514 RNF20Q5VTR2 975 aa13.31□□□□□ -0.28
GINS3-202ENST00000328514 CKAP2LQ8IYA6 745 aa13.31□□□□□ -0.28
GINS3-202ENST00000328514 MAP4K1Q92918 833 aa13.31□□□□□ -0.28
GINS3-202ENST00000328514 SPATA32Q96LK8 384 aa13.31□□□□□ -0.28
GINS3-202ENST00000328514 AGLP35573 1532 aa13.31□□□□□ -0.28
GINS3-202ENST00000328514 GOLGA6L4A6NEF3 574 aa13.31□□□□□ -0.28
GINS3-202ENST00000328514 CCDC144BQ3MJ40 725 aa13.31□□□□□ -0.28
GINS3-202ENST00000328514 KMT5BQ4FZB7 885 aa13.31□□□□□ -0.28
GINS3-202ENST00000328514 TPRNQ4KMQ1 711 aa13.31□□□□□ -0.28
GINS3-202ENST00000328514 TXNDC2Q86VQ3 553 aa13.31□□□□□ -0.28
GINS3-202ENST00000328514 CCDC144CPQ8IYA2 1237 aa13.31□□□□□ -0.28
GINS3-202ENST00000328514 EVI5LQ96CN4 794 aa13.31□□□□□ -0.28
GINS3-202ENST00000328514 ECHDC1Q9NTX5 307 aa13.31□□□□□ -0.28
GINS3-202ENST00000328514 CEP170BQ9Y4F5 1589 aaPredicted RBP13.3□□□□□ -0.28
GINS3-202ENST00000328514 HIP1O00291 1037 aa13.3□□□□□ -0.28
GINS3-202ENST00000328514 TSGA10IPQ3SY00 556 aa13.3□□□□□ -0.28
GINS3-202ENST00000328514 CREB3L3Q68CJ9 461 aa13.3□□□□□ -0.28
GINS3-202ENST00000328514 PTPRUQ92729 1446 aa13.3□□□□□ -0.28
GINS3-202ENST00000328514 JCADQ9P266 1359 aa13.3□□□□□ -0.28
GINS3-202ENST00000328514 ACEP12821 1306 aa13.3□□□□□ -0.28
GINS3-202ENST00000328514 GNAT3A8MTJ3 354 aa13.29□□□□□ -0.28
GINS3-202ENST00000328514 CTAGE5O15320 804 aa13.29□□□□□ -0.28
GINS3-202ENST00000328514 IGSF3O75054 1194 aa13.29□□□□□ -0.28
GINS3-202ENST00000328514 NAA30Q147X3 362 aaPredicted RBP13.29□□□□□ -0.28
GINS3-202ENST00000328514 NECAB1Q8N987 351 aa13.29□□□□□ -0.28
GINS3-202ENST00000328514 TMEM51Q9NW97 253 aa13.29□□□□□ -0.28
GINS3-202ENST00000328514 NR1I2O75469 434 aa13.29□□□□□ -0.28
GINS3-202ENST00000328514 PTPN14Q15678 1187 aa13.29□□□□□ -0.28
GINS3-202ENST00000328514 PGBD1Q96JS3 809 aa13.29□□□□□ -0.28
GINS3-202ENST00000328514 CHMP4AQ9BY43 222 aa13.29□□□□□ -0.28
GINS3-202ENST00000328514 DNAJC25Q9H1X3 360 aa13.29□□□□□ -0.28
GINS3-202ENST00000328514 ZNF215Q9UL58 517 aaPredicted RBP13.29□□□□□ -0.28
GINS3-202ENST00000328514 RBM8AQ9Y5S9 174 aaKnown RBP13.29□□□□□ -0.28
GINS3-202ENST00000328514 DIP2AQ14689 1571 aa13.28□□□□□ -0.28
GINS3-202ENST00000328514 HOXB7P09629 217 aa13.28□□□□□ -0.28
GINS3-202ENST00000328514 GTF2E1P29083 439 aaPredicted RBP13.28□□□□□ -0.28
GINS3-202ENST00000328514 SLC20A2Q08357 652 aa13.28□□□□□ -0.28
GINS3-202ENST00000328514 TAF7Q15545 349 aaPredicted RBP13.28□□□□□ -0.28
GINS3-202ENST00000328514 BEND3Q5T5X7 828 aa13.28□□□□□ -0.28
GINS3-202ENST00000328514 FERMT3Q86UX7 667 aa13.28□□□□□ -0.28
GINS3-202ENST00000328514 CLASRPQ8N2M8 674 aaKnown RBP13.28□□□□□ -0.28
GINS3-202ENST00000328514 GPATCH3Q96I76 525 aa13.28□□□□□ -0.28
GINS3-202ENST00000328514 EYA1Q99502 592 aa13.28□□□□□ -0.28
GINS3-202ENST00000328514 NPHP4O75161 1426 aaPredicted RBP13.27□□□□□ -0.28
GINS3-202ENST00000328514 SLC27A2O14975 620 aa13.27□□□□□ -0.28
GINS3-202ENST00000328514 TUBB4AP04350 444 aa13.27□□□□□ -0.28
GINS3-202ENST00000328514 ERC1Q8IUD2 1116 aa13.27□□□□□ -0.28
GINS3-202ENST00000328514 L2HGDHQ9H9P8 463 aa13.27□□□□□ -0.28
GINS3-202ENST00000328514 ADCY9O60503 1353 aa13.27□□□□□ -0.28
GINS3-202ENST00000328514 ERBB3P21860 1342 aa13.27□□□□□ -0.29
GINS3-202ENST00000328514 NBPF7P0C2Y1 421 aaPredicted RBP13.27□□□□□ -0.29
GINS3-202ENST00000328514 SKILP12757 684 aa13.27□□□□□ -0.29
GINS3-202ENST00000328514 RPS6KB1P23443 525 aa13.27□□□□□ -0.29
GINS3-202ENST00000328514 KCNJ6P48051 423 aa13.27□□□□□ -0.29
GINS3-202ENST00000328514 CCZ1BP86790 482 aa13.27□□□□□ -0.29
GINS3-202ENST00000328514 CCZ1P86791 482 aaPredicted RBP13.27□□□□□ -0.29
GINS3-202ENST00000328514 FAM173BQ6P4H8 233 aa13.27□□□□□ -0.29
GINS3-202ENST00000328514 FBXO38Q6PIJ6 1188 aa13.27□□□□□ -0.29
GINS3-202ENST00000328514 CCAR2Q8N163 923 aaKnown RBP13.27□□□□□ -0.29
GINS3-202ENST00000328514 ZSCAN16Q9H4T2 348 aaPredicted RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms