RNA–Protein interactions for RNA: ENST00000326335.8

CUL4A-201, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 3,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-201ENST00000326335 NBPF10Q6P3W6 841 aaKnown RBP12.83□□□□□ -0.36
CUL4A-201ENST00000326335 DNAJC10Q8IXB1 793 aa12.83□□□□□ -0.36
CUL4A-201ENST00000326335 NBPF15Q8N660 670 aa12.83□□□□□ -0.36
CUL4A-201ENST00000326335 DCAF5Q96JK2 942 aa12.83□□□□□ -0.36
CUL4A-201ENST00000326335 UTRNP46939 3433 aa12.83□□□□□ -0.36
CUL4A-201ENST00000326335 GADD45BO75293 160 aaPredicted RBP12.83□□□□□ -0.36
CUL4A-201ENST00000326335 HAND2P61296 217 aa12.83□□□□□ -0.36
CUL4A-201ENST00000326335 FAM182BQ5T319 152 aa12.83□□□□□ -0.36
CUL4A-201ENST00000326335 RBM8AQ9Y5S9 174 aaKnown RBP12.83□□□□□ -0.36
CUL4A-201ENST00000326335 NUCB2P80303 420 aa12.82□□□□□ -0.36
CUL4A-201ENST00000326335 POLA2Q14181 598 aa12.82□□□□□ -0.36
CUL4A-201ENST00000326335 PI16Q6UXB8 463 aa12.82□□□□□ -0.36
CUL4A-201ENST00000326335 SMC3Q9UQE7 1217 aa12.82□□□□□ -0.36
CUL4A-201ENST00000326335 LTN1O94822 1766 aa12.82□□□□□ -0.36
CUL4A-201ENST00000326335 NWD1Q149M9 1564 aa12.82□□□□□ -0.36
CUL4A-201ENST00000326335 KIF24Q5T7B8 1368 aa12.82□□□□□ -0.36
CUL4A-201ENST00000326335 FBXW7Q969H0 707 aa12.82□□□□□ -0.36
CUL4A-201ENST00000326335 RRAGDQ9NQL2 400 aaPredicted RBP12.82□□□□□ -0.36
CUL4A-201ENST00000326335 TMOD3Q9NYL9 352 aa12.82□□□□□ -0.36
CUL4A-201ENST00000326335 TOPAZ1Q8N9V7 1692 aa12.81□□□□□ -0.36
CUL4A-201ENST00000326335 METTL22Q9BUU2 404 aaPredicted RBP12.81□□□□□ -0.36
CUL4A-201ENST00000326335 OSBPL3Q9H4L5 887 aa12.81□□□□□ -0.36
CUL4A-201ENST00000326335 PDRG1Q9NUG6 133 aa12.81□□□□□ -0.36
CUL4A-201ENST00000326335 CNPY2Q9Y2B0 182 aa12.81□□□□□ -0.36
CUL4A-201ENST00000326335 VIRMAQ69YN4 1812 aaKnown RBP12.81□□□□□ -0.36
CUL4A-201ENST00000326335 A0A0G2JLW4 131 aa12.81□□□□□ -0.36
CUL4A-201ENST00000326335 WASHC4Q2M389 1173 aa12.81□□□□□ -0.36
CUL4A-201ENST00000326335 NAP1L5Q96NT1 182 aaPredicted RBP12.81□□□□□ -0.36
CUL4A-201ENST00000326335 DBNLQ9UJU6 430 aaKnown RBP12.81□□□□□ -0.36
CUL4A-201ENST00000326335 ZKSCAN1P17029 563 aaPredicted RBP12.8□□□□□ -0.36
CUL4A-201ENST00000326335 CCDC24Q8N4L8 307 aa12.8□□□□□ -0.36
CUL4A-201ENST00000326335 SALL3Q9BXA9 1300 aa12.8□□□□□ -0.36
CUL4A-201ENST00000326335 GUCY1B3Q02153 619 aa12.8□□□□□ -0.36
CUL4A-201ENST00000326335 ANP32BQ92688 251 aaKnown RBP12.8□□□□□ -0.36
CUL4A-201ENST00000326335 FMN2Q9NZ56 1722 aa12.8□□□□□ -0.36
CUL4A-201ENST00000326335 TFIP11Q9UBB9 837 aaKnown RBP12.8□□□□□ -0.36
CUL4A-201ENST00000326335 IQSEC3Q9UPP2 1182 aaPredicted RBP12.8□□□□□ -0.36
CUL4A-201ENST00000326335 IL2RBP14784 551 aa12.8□□□□□ -0.36
CUL4A-201ENST00000326335 ALDH1L1O75891 902 aa12.79□□□□□ -0.36
CUL4A-201ENST00000326335 NASPP49321 788 aaPredicted RBP12.79□□□□□ -0.36
CUL4A-201ENST00000326335 PRIM1P49642 420 aaKnown RBP12.79□□□□□ -0.36
CUL4A-201ENST00000326335 BICDL1Q6ZP65 573 aa12.79□□□□□ -0.36
CUL4A-201ENST00000326335 ARID3AQ99856 593 aa12.79□□□□□ -0.36
CUL4A-201ENST00000326335 SPATA31A3Q5VYP0 1347 aa12.79□□□□□ -0.36
CUL4A-201ENST00000326335 KDM6AO15550 1401 aaPredicted RBP12.79□□□□□ -0.36
CUL4A-201ENST00000326335 GPT2Q8TD30 523 aa12.79□□□□□ -0.36
CUL4A-201ENST00000326335 RUFY2Q8WXA3 655 aa12.79□□□□□ -0.36
CUL4A-201ENST00000326335 CIZ1Q9ULV3 898 aaPredicted RBP12.79□□□□□ -0.36
CUL4A-201ENST00000326335 RUFY3Q7L099 469 aa12.79□□□□□ -0.36
CUL4A-201ENST00000326335 LSG1Q9H089 658 aaKnown RBP12.79□□□□□ -0.36
CUL4A-201ENST00000326335 STAP2Q9UGK3 403 aa12.78□□□□□ -0.36
CUL4A-201ENST00000326335 DDIT3P35638 169 aa12.78□□□□□ -0.36
CUL4A-201ENST00000326335 CCT2P78371 535 aaKnown RBP12.78□□□□□ -0.36
CUL4A-201ENST00000326335 ZSCAN23Q3MJ62 389 aa12.78□□□□□ -0.36
CUL4A-201ENST00000326335 CYP46A1Q9Y6A2 500 aa12.78□□□□□ -0.36
CUL4A-201ENST00000326335 GJB2P29033 226 aa12.78□□□□□ -0.36
CUL4A-201ENST00000326335 VPS53Q5VIR6 699 aa12.78□□□□□ -0.36
CUL4A-201ENST00000326335 LMBRD1Q9NUN5 540 aa12.78□□□□□ -0.36
CUL4A-201ENST00000326335 HSPA4P34932 840 aa12.77□□□□□ -0.36
CUL4A-201ENST00000326335 PTPN12Q05209 780 aaKnown RBP12.77□□□□□ -0.36
CUL4A-201ENST00000326335 BCL11BQ9C0K0 894 aaPredicted RBP12.77□□□□□ -0.36
CUL4A-201ENST00000326335 XRN1Q8IZH2 1706 aaKnown RBP12.77□□□□□ -0.36
CUL4A-201ENST00000326335 CREB3L3Q68CJ9 461 aa12.77□□□□□ -0.37
CUL4A-201ENST00000326335 TMEM63CQ9P1W3 806 aa12.77□□□□□ -0.37
CUL4A-201ENST00000326335 MRE11P49959 708 aa12.77□□□□□ -0.37
CUL4A-201ENST00000326335 CAMK4Q16566 473 aa12.77□□□□□ -0.37
CUL4A-201ENST00000326335 TNNI3KQ59H18 835 aa12.77□□□□□ -0.37
CUL4A-201ENST00000326335 ERC1Q8IUD2 1116 aa12.77□□□□□ -0.37
CUL4A-201ENST00000326335 FPGT-TNNI3KV9GXZ4 949 aa12.77□□□□□ -0.37
CUL4A-201ENST00000326335 RAD50Q92878 1312 aa12.77□□□□□ -0.37
CUL4A-201ENST00000326335 APPP05067 770 aa12.76□□□□□ -0.37
CUL4A-201ENST00000326335 HOXB7P09629 217 aa12.76□□□□□ -0.37
CUL4A-201ENST00000326335 EVI5LQ96CN4 794 aa12.76□□□□□ -0.37
CUL4A-201ENST00000326335 CWC25Q9NXE8 425 aaPredicted RBP12.76□□□□□ -0.37
CUL4A-201ENST00000326335 RGPD1P0DJD0 1748 aa12.76□□□□□ -0.37
CUL4A-201ENST00000326335 NFAT5O94916 1531 aa12.76□□□□□ -0.37
CUL4A-201ENST00000326335 RGPD5Q99666 1765 aa12.76□□□□□ -0.37
CUL4A-201ENST00000326335 ADORA1P30542 326 aa12.76□□□□□ -0.37
CUL4A-201ENST00000326335 DNM1Q05193 864 aaKnown RBP12.76□□□□□ -0.37
CUL4A-201ENST00000326335 TTLL5Q6EMB2 1281 aa12.76□□□□□ -0.37
CUL4A-201ENST00000326335 CHMP4AQ9BY43 222 aa12.76□□□□□ -0.37
CUL4A-201ENST00000326335 BABAM1Q9NWV8 329 aa12.76□□□□□ -0.37
CUL4A-201ENST00000326335 PTMAP06454 111 aaKnown RBP12.76□□□□□ -0.37
CUL4A-201ENST00000326335 CCDC57Q2TAC2 916 aa12.76□□□□□ -0.37
CUL4A-201ENST00000326335 USP48Q86UV5 1035 aa12.76□□□□□ -0.37
CUL4A-201ENST00000326335 EP400Q96L91 3159 aa12.76□□□□□ -0.37
CUL4A-201ENST00000326335 HLFQ16534 295 aa12.75□□□□□ -0.37
CUL4A-201ENST00000326335 BLOC1S2Q6QNY1 142 aa12.75□□□□□ -0.37
CUL4A-201ENST00000326335 HCLS1P14317 486 aaPredicted RBP12.75□□□□□ -0.37
CUL4A-201ENST00000326335 SYT1P21579 422 aa12.75□□□□□ -0.37
CUL4A-201ENST00000326335 ME3Q16798 604 aa12.75□□□□□ -0.37
CUL4A-201ENST00000326335 PIGBQ92521 554 aa12.75□□□□□ -0.37
CUL4A-201ENST00000326335 RBSNQ9H1K0 784 aa12.75□□□□□ -0.37
CUL4A-201ENST00000326335 LIMCH1Q9UPQ0 1083 aa12.75□□□□□ -0.37
CUL4A-201ENST00000326335 CCDC171Q6TFL3 1326 aa12.75□□□□□ -0.37
CUL4A-201ENST00000326335 JAK2O60674 1132 aa12.74□□□□□ -0.37
CUL4A-201ENST00000326335 NCOA5Q9HCD5 579 aaKnown RBP12.74□□□□□ -0.37
CUL4A-201ENST00000326335 MST1RQ04912 1400 aa12.74□□□□□ -0.37
CUL4A-201ENST00000326335 IFIT1P09914 478 aaKnown RBP12.74□□□□□ -0.37
CUL4A-201ENST00000326335 SLC4A8Q2Y0W8 1093 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms