RNA–Protein interactions for RNA: ENST00000326279.10

LIN28A-202, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-202ENST00000326279 SMC3Q9UQE7 1217 aa15.78■□□□□ 0.12
LIN28A-202ENST00000326279 REREQ9P2R6 1566 aa15.78■□□□□ 0.12
LIN28A-202ENST00000326279 EDC3Q96F86 508 aaKnown RBP15.78■□□□□ 0.12
LIN28A-202ENST00000326279 LAMC1P11047 1609 aa15.78■□□□□ 0.12
LIN28A-202ENST00000326279 DDX11L8A8MPP1 907 aa15.77■□□□□ 0.12
LIN28A-202ENST00000326279 FAM184AQ8NB25 1140 aa15.77■□□□□ 0.12
LIN28A-202ENST00000326279 NEURL1BA8MQ27 555 aa15.77■□□□□ 0.11
LIN28A-202ENST00000326279 F8W031 263 aaPredicted RBP15.77■□□□□ 0.11
LIN28A-202ENST00000326279 GLRX3O76003 335 aaKnown RBP15.77■□□□□ 0.11
LIN28A-202ENST00000326279 NOL10Q9BSC4 688 aaKnown RBP15.77■□□□□ 0.11
LIN28A-202ENST00000326279 HLFQ16534 295 aa15.76■□□□□ 0.11
LIN28A-202ENST00000326279 ECHDC1Q9NTX5 307 aa15.76■□□□□ 0.11
LIN28A-202ENST00000326279 H3BQV1 296 aa15.76■□□□□ 0.11
LIN28A-202ENST00000326279 IFFO2Q5TF58 517 aa15.76■□□□□ 0.11
LIN28A-202ENST00000326279 TPTE2Q6XPS3 522 aa15.76■□□□□ 0.11
LIN28A-202ENST00000326279 BEND3Q5T5X7 828 aa15.76■□□□□ 0.11
LIN28A-202ENST00000326279 L1TD1Q5T7N2 865 aaKnown RBP15.76■□□□□ 0.11
LIN28A-202ENST00000326279 TCEANC2Q96MN5 208 aa15.76■□□□□ 0.11
LIN28A-202ENST00000326279 LRRC7Q96NW7 1537 aa15.76■□□□□ 0.11
LIN28A-202ENST00000326279 RAB11FIP3O75154 756 aa15.75■□□□□ 0.11
LIN28A-202ENST00000326279 SNAP23O00161 211 aa15.75■□□□□ 0.11
LIN28A-202ENST00000326279 RIMBP2O15034 1052 aa15.75■□□□□ 0.11
LIN28A-202ENST00000326279 JAKMIP1Q96N16 626 aaKnown RBP15.75■□□□□ 0.11
LIN28A-202ENST00000326279 ITGA6P23229 1130 aa15.75■□□□□ 0.11
LIN28A-202ENST00000326279 PRPF40BQ6NWY9 871 aaKnown RBP15.75■□□□□ 0.11
LIN28A-202ENST00000326279 UBR1Q8IWV7 1749 aa15.75■□□□□ 0.11
LIN28A-202ENST00000326279 TRAK2O60296 914 aa15.74■□□□□ 0.11
LIN28A-202ENST00000326279 HAND2P61296 217 aa15.74■□□□□ 0.11
LIN28A-202ENST00000326279 TRDNQ13061 729 aa15.74■□□□□ 0.11
LIN28A-202ENST00000326279 ARHGEF28Q8N1W1 1705 aaKnown RBP15.74■□□□□ 0.11
LIN28A-202ENST00000326279 SH3TC1Q8TE82 1336 aa15.74■□□□□ 0.11
LIN28A-202ENST00000326279 NFXL1Q6ZNB6 911 aa15.74■□□□□ 0.11
LIN28A-202ENST00000326279 ATP2B3Q16720 1220 aa15.73■□□□□ 0.11
LIN28A-202ENST00000326279 ANKRD18AQ8IVF6 992 aa15.73■□□□□ 0.11
LIN28A-202ENST00000326279 DBNDD2Q9BQY9 259 aa15.73■□□□□ 0.11
LIN28A-202ENST00000326279 JCADQ9P266 1359 aa15.73■□□□□ 0.11
LIN28A-202ENST00000326279 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.73■□□□□ 0.11
LIN28A-202ENST00000326279 HOXB7P09629 217 aa15.73■□□□□ 0.11
LIN28A-202ENST00000326279 TCIRG1Q13488 830 aa15.73■□□□□ 0.11
LIN28A-202ENST00000326279 CCDC152Q4G0S7 254 aa15.73■□□□□ 0.11
LIN28A-202ENST00000326279 ABCC4O15439 1325 aa15.73■□□□□ 0.11
LIN28A-202ENST00000326279 PRPF40AO75400 957 aaKnown RBP15.73■□□□□ 0.11
LIN28A-202ENST00000326279 RALYLQ86SE5 291 aaKnown RBP15.73■□□□□ 0.11
LIN28A-202ENST00000326279 GNL3LQ9NVN8 582 aaKnown RBP15.73■□□□□ 0.11
LIN28A-202ENST00000326279 NUCB2P80303 420 aa15.72■□□□□ 0.11
LIN28A-202ENST00000326279 ATP2B2Q01814 1243 aa15.72■□□□□ 0.11
LIN28A-202ENST00000326279 LRRFIP1Q32MZ4 808 aaKnown RBP15.72■□□□□ 0.11
LIN28A-202ENST00000326279 NCBP3Q53F19 620 aaKnown RBP15.72■□□□□ 0.11
LIN28A-202ENST00000326279 SIRT2Q8IXJ6 389 aa15.72■□□□□ 0.11
LIN28A-202ENST00000326279 MINDY4BA8MYZ0 360 aa15.72■□□□□ 0.11
LIN28A-202ENST00000326279 PUS3Q9BZE2 481 aaKnown RBP15.72■□□□□ 0.11
LIN28A-202ENST00000326279 SOS1Q07889 1333 aaPredicted RBP15.72■□□□□ 0.11
LIN28A-202ENST00000326279 NBPF26B4DH59 902 aa15.72■□□□□ 0.11
LIN28A-202ENST00000326279 DHX16O60231 1041 aaKnown RBP15.72■□□□□ 0.11
LIN28A-202ENST00000326279 CASTP20810 708 aaKnown RBP15.72■□□□□ 0.11
LIN28A-202ENST00000326279 NBPF14Q5TI25 921 aa15.72■□□□□ 0.11
LIN28A-202ENST00000326279 NBPF10Q6P3W6 841 aaKnown RBP15.72■□□□□ 0.11
LIN28A-202ENST00000326279 PTF1AQ7RTS3 328 aa15.72■□□□□ 0.11
LIN28A-202ENST00000326279 NBPF15Q8N660 670 aa15.72■□□□□ 0.11
LIN28A-202ENST00000326279 CNBD1Q8NA66 436 aa15.72■□□□□ 0.11
LIN28A-202ENST00000326279 CDC5LQ99459 802 aaKnown RBP15.72■□□□□ 0.11
LIN28A-202ENST00000326279 BABAM1Q9NWV8 329 aa15.72■□□□□ 0.11
LIN28A-202ENST00000326279 PIBF1Q8WXW3 757 aa15.72■□□□□ 0.11
LIN28A-202ENST00000326279 LRRC24Q50LG9 513 aa15.71■□□□□ 0.11
LIN28A-202ENST00000326279 CAVIN4Q5BKX8 364 aa15.71■□□□□ 0.11
LIN28A-202ENST00000326279 RAB11FIP4Q86YS3 637 aa15.71■□□□□ 0.11
LIN28A-202ENST00000326279 KIF24Q5T7B8 1368 aa15.7■□□□□ 0.1
LIN28A-202ENST00000326279 PALLDQ8WX93 1383 aa15.7■□□□□ 0.1
LIN28A-202ENST00000326279 AKAP2Q9Y2D5 859 aa15.7■□□□□ 0.1
LIN28A-202ENST00000326279 CCDC191Q8NCU4 936 aa15.7■□□□□ 0.1
LIN28A-202ENST00000326279 CPLX1O14810 134 aa15.7■□□□□ 0.1
LIN28A-202ENST00000326279 DNTTIP2Q5QJE6 756 aaKnown RBP15.7■□□□□ 0.1
LIN28A-202ENST00000326279 ZSCAN29Q8IWY8 852 aaPredicted RBP15.7■□□□□ 0.1
LIN28A-202ENST00000326279 CYP46A1Q9Y6A2 500 aa15.7■□□□□ 0.1
LIN28A-202ENST00000326279 SEC31BQ9NQW1 1179 aa15.69■□□□□ 0.1
LIN28A-202ENST00000326279 HEG1Q9ULI3 1381 aa15.69■□□□□ 0.1
LIN28A-202ENST00000326279 EPHA10Q5JZY3 1008 aa15.69■□□□□ 0.1
LIN28A-202ENST00000326279 ZNF772Q68DY9 489 aaPredicted RBP15.69■□□□□ 0.1
LIN28A-202ENST00000326279 SPATA31A1Q5TZJ5 1347 aa15.69■□□□□ 0.1
LIN28A-202ENST00000326279 SLC5A1P13866 664 aa15.69■□□□□ 0.1
LIN28A-202ENST00000326279 MCM4P33991 863 aa15.69■□□□□ 0.1
LIN28A-202ENST00000326279 TDO2P48775 406 aa15.69■□□□□ 0.1
LIN28A-202ENST00000326279 CAVIN1Q6NZI2 390 aaKnown RBP15.69■□□□□ 0.1
LIN28A-202ENST00000326279 CCDC82Q8N4S0 544 aa15.69■□□□□ 0.1
LIN28A-202ENST00000326279 AIDAQ96BJ3 306 aa15.69■□□□□ 0.1
LIN28A-202ENST00000326279 ST5P78524 1137 aa15.68■□□□□ 0.1
LIN28A-202ENST00000326279 TRIM34Q9BYJ4 488 aa15.68■□□□□ 0.1
LIN28A-202ENST00000326279 GREM2Q9H772 168 aa15.68■□□□□ 0.1
LIN28A-202ENST00000326279 KIAA1210Q9ULL0 1709 aa15.68■□□□□ 0.1
LIN28A-202ENST00000326279 FIBPO43427 364 aa15.68■□□□□ 0.1
LIN28A-202ENST00000326279 IGKV5-2P06315 115 aa15.68■□□□□ 0.1
LIN28A-202ENST00000326279 CRB1P82279 1406 aa15.68■□□□□ 0.1
LIN28A-202ENST00000326279 A0A1B0GUL7 405 aa15.68■□□□□ 0.1
LIN28A-202ENST00000326279 SSFA2P28290 1259 aa15.68■□□□□ 0.1
LIN28A-202ENST00000326279 SF3A1Q15459 793 aaKnown RBP15.68■□□□□ 0.1
LIN28A-202ENST00000326279 LRRC2Q9BYS8 371 aa15.68■□□□□ 0.1
LIN28A-202ENST00000326279 EN1Q05925 392 aaPredicted RBP15.67■□□□□ 0.1
LIN28A-202ENST00000326279 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.67■□□□□ 0.1
LIN28A-202ENST00000326279 ATP2B1P20020 1258 aa15.67■□□□□ 0.1
LIN28A-202ENST00000326279 CEBPZQ03701 1054 aaKnown RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms