RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 CAPN2P17655 700 aa9.5□□□□□ -0.89
CSTF3-201ENST00000323959 Q7L0L9 218 aa9.5□□□□□ -0.89
CSTF3-201ENST00000323959 SAMD7Q7Z3H4 446 aa9.5□□□□□ -0.89
CSTF3-201ENST00000323959 SNED1Q8TER0 1413 aa9.5□□□□□ -0.89
CSTF3-201ENST00000323959 ALDH1A1P00352 501 aa9.5□□□□□ -0.89
CSTF3-201ENST00000323959 AMPHP49418 695 aa9.5□□□□□ -0.89
CSTF3-201ENST00000323959 CC2D2BQ6DHV5 1058 aa9.5□□□□□ -0.89
CSTF3-201ENST00000323959 NBPF11Q86T75 865 aa9.5□□□□□ -0.89
CSTF3-201ENST00000323959 C1QTNF1Q9BXJ1 281 aa9.5□□□□□ -0.89
CSTF3-201ENST00000323959 SREBF2Q12772 1141 aa9.49□□□□□ -0.89
CSTF3-201ENST00000323959 TJAP1Q5JTD0 557 aa9.49□□□□□ -0.89
CSTF3-201ENST00000323959 MPHOSPH9Q99550 1183 aa9.49□□□□□ -0.89
CSTF3-201ENST00000323959 INTS5Q6P9B9 1019 aaKnown RBP9.49□□□□□ -0.89
CSTF3-201ENST00000323959 ZEB1P37275 1124 aaPredicted RBP9.48□□□□□ -0.89
CSTF3-201ENST00000323959 USP48Q86UV5 1035 aa9.48□□□□□ -0.89
CSTF3-201ENST00000323959 BCL2L12Q9HB09 334 aa9.48□□□□□ -0.89
CSTF3-201ENST00000323959 COL15A1P39059 1388 aa9.48□□□□□ -0.89
CSTF3-201ENST00000323959 KIF24Q5T7B8 1368 aa9.48□□□□□ -0.89
CSTF3-201ENST00000323959 NPR1P16066 1061 aa9.48□□□□□ -0.89
CSTF3-201ENST00000323959 PRR5LQ6MZQ0 368 aa9.48□□□□□ -0.89
CSTF3-201ENST00000323959 CNKSR2Q8WXI2 1034 aa9.48□□□□□ -0.89
CSTF3-201ENST00000323959 COL4A5P29400 1685 aa9.47□□□□□ -0.89
CSTF3-201ENST00000323959 SLC4A8Q2Y0W8 1093 aa9.47□□□□□ -0.89
CSTF3-201ENST00000323959 VPS33BQ9H267 617 aa9.47□□□□□ -0.89
CSTF3-201ENST00000323959 ST5P78524 1137 aa9.47□□□□□ -0.89
CSTF3-201ENST00000323959 IFNL2Q8IZJ0 200 aa9.47□□□□□ -0.89
CSTF3-201ENST00000323959 CLSPNQ9HAW4 1339 aa9.47□□□□□ -0.89
CSTF3-201ENST00000323959 LAMB1P07942 1786 aa9.47□□□□□ -0.89
CSTF3-201ENST00000323959 ARHGEF6Q15052 776 aa9.46□□□□□ -0.9
CSTF3-201ENST00000323959 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.46□□□□□ -0.91e-6■■■■□ 25.4
CSTF3-201ENST00000323959 USHBP1Q8N6Y0 703 aa9.46□□□□□ -0.9
CSTF3-201ENST00000323959 NKX2-3Q8TAU0 364 aa9.46□□□□□ -0.9
CSTF3-201ENST00000323959 GUCD1Q96NT3 240 aa9.46□□□□□ -0.9
CSTF3-201ENST00000323959 A0A087WZG4 1122 aa9.46□□□□□ -0.9
CSTF3-201ENST00000323959 UBE2Q1Q7Z7E8 422 aa9.46□□□□□ -0.9
CSTF3-201ENST00000323959 PHKG2P15735 406 aa9.45□□□□□ -0.9
CSTF3-201ENST00000323959 HSP90AB1P08238 724 aaKnown RBP9.45□□□□□ -0.9
CSTF3-201ENST00000323959 ALYREFQ86V81 257 aaKnown RBP9.45□□□□□ -0.9
CSTF3-201ENST00000323959 NIM1KQ8IY84 436 aa9.45□□□□□ -0.9
CSTF3-201ENST00000323959 SSC5DA1L4H1 1573 aa9.44□□□□□ -0.9
CSTF3-201ENST00000323959 MAFAQ8NHW3 353 aaPredicted RBP9.44□□□□□ -0.9
CSTF3-201ENST00000323959 GDF15Q99988 308 aa9.44□□□□□ -0.9
CSTF3-201ENST00000323959 EFCC1Q9HA90 598 aa9.44□□□□□ -0.9
CSTF3-201ENST00000323959 DCAF11Q8TEB1 546 aa9.43□□□□□ -0.9
CSTF3-201ENST00000323959 IGSF5Q9NSI5 407 aa9.43□□□□□ -0.9
CSTF3-201ENST00000323959 NPC1L1Q9UHC9 1359 aa9.43□□□□□ -0.9
CSTF3-201ENST00000323959 KIAA0100Q14667 2235 aaKnown RBP9.43□□□□□ -0.9
CSTF3-201ENST00000323959 KLRG2A4D1S0 409 aaPredicted RBP9.43□□□□□ -0.9
CSTF3-201ENST00000323959 HIRAP54198 1017 aaPredicted RBP9.43□□□□□ -0.9
CSTF3-201ENST00000323959 KRT26Q7Z3Y9 468 aa9.43□□□□□ -0.9
CSTF3-201ENST00000323959 CNBD1Q8NA66 436 aa9.43□□□□□ -0.9
CSTF3-201ENST00000323959 GMPSP49915 693 aaPredicted RBP9.42□□□□□ -0.9
CSTF3-201ENST00000323959 HDGFL2Q7Z4V5 671 aaPredicted RBP9.42□□□□□ -0.9
CSTF3-201ENST00000323959 LARGE2Q8N3Y3 721 aa9.42□□□□□ -0.9
CSTF3-201ENST00000323959 COL2A1P02458 1487 aaPredicted RBP9.42□□□□□ -0.9
CSTF3-201ENST00000323959 SLC9C1Q4G0N8 1177 aa9.42□□□□□ -0.9
CSTF3-201ENST00000323959 ALDH1B1P30837 517 aa9.41□□□□□ -0.9
CSTF3-201ENST00000323959 SHISA4Q96DD7 197 aa9.41□□□□□ -0.9
CSTF3-201ENST00000323959 STAP2Q9UGK3 403 aa9.41□□□□□ -0.9
CSTF3-201ENST00000323959 CEP290O15078 2479 aa9.41□□□□□ -0.9
CSTF3-201ENST00000323959 IRS2Q9Y4H2 1338 aa9.41□□□□□ -0.9
CSTF3-201ENST00000323959 TRPM4Q8TD43 1214 aa9.41□□□□□ -0.9
CSTF3-201ENST00000323959 POTEB2H3BUK9 544 aa9.4□□□□□ -0.9
CSTF3-201ENST00000323959 H7C1D1 291 aa9.4□□□□□ -0.9
CSTF3-201ENST00000323959 TDHQ8IZJ6 230 aa9.4□□□□□ -0.9
CSTF3-201ENST00000323959 DCPSQ96C86 337 aaKnown RBP9.4□□□□□ -0.9
CSTF3-201ENST00000323959 WTIPA6NIX2 430 aaPredicted RBP9.4□□□□□ -0.91
CSTF3-201ENST00000323959 INHBEP58166 350 aa9.4□□□□□ -0.91
CSTF3-201ENST00000323959 TNIP1Q15025 636 aa9.4□□□□□ -0.91
CSTF3-201ENST00000323959 COG3Q96JB2 828 aa9.39□□□□□ -0.91
CSTF3-201ENST00000323959 KIF7Q2M1P5 1343 aa9.39□□□□□ -0.91
CSTF3-201ENST00000323959 BCAMP50895 628 aa9.39□□□□□ -0.91
CSTF3-201ENST00000323959 ZNRF3Q9ULT6 936 aa9.39□□□□□ -0.91
CSTF3-201ENST00000323959 FLT4P35916 1363 aa9.39□□□□□ -0.91
CSTF3-201ENST00000323959 EVI5O60447 810 aa9.38□□□□□ -0.91
CSTF3-201ENST00000323959 MRE11P49959 708 aa9.38□□□□□ -0.91
CSTF3-201ENST00000323959 TBC1D9BQ66K14 1250 aa9.38□□□□□ -0.91
CSTF3-201ENST00000323959 CD99L2Q8TCZ2 262 aa9.38□□□□□ -0.91
CSTF3-201ENST00000323959 BCL2L13Q9BXK5 485 aa9.38□□□□□ -0.91
CSTF3-201ENST00000323959 R3HDMLQ9H3Y0 253 aa9.38□□□□□ -0.91
CSTF3-201ENST00000323959 CDCA5Q96FF9 252 aa9.38□□□□□ -0.91
CSTF3-201ENST00000323959 PRMT2P55345 433 aa9.37□□□□□ -0.91
CSTF3-201ENST00000323959 FAM205AQ6ZU69 1335 aa9.37□□□□□ -0.91
CSTF3-201ENST00000323959 CYP19A1P11511 503 aaPredicted RBP9.37□□□□□ -0.91
CSTF3-201ENST00000323959 CXCL9Q07325 125 aa9.37□□□□□ -0.91
CSTF3-201ENST00000323959 ADM5C9JUS6 153 aa9.36□□□□□ -0.91
CSTF3-201ENST00000323959 CABP4P57796 275 aa9.36□□□□□ -0.91
CSTF3-201ENST00000323959 DPF2Q92785 391 aa9.36□□□□□ -0.91
CSTF3-201ENST00000323959 ZBTB12Q9Y330 459 aaPredicted RBP9.36□□□□□ -0.91
CSTF3-201ENST00000323959 MANSC4A6NHS7 340 aaPredicted RBP9.36□□□□□ -0.91
CSTF3-201ENST00000323959 ZNF697Q5TEC3 545 aa9.36□□□□□ -0.91
CSTF3-201ENST00000323959 SUPT20HQ8NEM7 779 aa9.36□□□□□ -0.91
CSTF3-201ENST00000323959 RAB3GAP2Q9H2M9 1393 aa9.36□□□□□ -0.91
CSTF3-201ENST00000323959 SULF1Q8IWU6 871 aa9.35□□□□□ -0.91
CSTF3-201ENST00000323959 SETDB2Q96T68 719 aa9.35□□□□□ -0.91
CSTF3-201ENST00000323959 TERF2IPQ9NYB0 399 aa9.35□□□□□ -0.91
CSTF3-201ENST00000323959 CNOT7Q9UIV1 285 aaKnown RBP9.35□□□□□ -0.91
CSTF3-201ENST00000323959 COL6A3P12111 3177 aa9.35□□□□□ -0.91
CSTF3-201ENST00000323959 NPHP1O15259 732 aa9.35□□□□□ -0.91
CSTF3-201ENST00000323959 FARP2O94887 1054 aaPredicted RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms