RNA–Protein interactions for RNA: ENST00000323250.9

TYMS-202, Transcript of thymidylate synthetase, humanhuman

TSL 1 (best) BASIC

Gene TYMS, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TYMS-202ENST00000323250 SLC10A5Q5PT55 438 aa22.89■■□□□ 1.25
TYMS-202ENST00000323250 ANKRD13DQ6ZTN6 518 aa22.89■■□□□ 1.25
TYMS-202ENST00000323250 PLBD2Q8NHP8 589 aa22.89■■□□□ 1.25
TYMS-202ENST00000323250 TAOK3Q9H2K8 898 aa22.89■■□□□ 1.25
TYMS-202ENST00000323250 PHAXQ9H814 394 aaKnown RBP22.89■■□□□ 1.25
TYMS-202ENST00000323250 HYPKQ9NX55 129 aa22.89■■□□□ 1.25
TYMS-202ENST00000323250 SALL2Q9Y467 1007 aaPredicted RBP22.89■■□□□ 1.25
TYMS-202ENST00000323250 RIC1Q4ADV7 1423 aa22.89■■□□□ 1.25
TYMS-202ENST00000323250 LTBP3Q9NS15 1303 aa22.88■■□□□ 1.25
TYMS-202ENST00000323250 HOXA10P31260 410 aaPredicted RBP22.88■■□□□ 1.25
TYMS-202ENST00000323250 HSP90AB3PQ58FF7 597 aa22.88■■□□□ 1.25
TYMS-202ENST00000323250 FER1L6Q2WGJ9 1857 aa22.88■■□□□ 1.25
TYMS-202ENST00000323250 ALDH1B1P30837 517 aa22.87■■□□□ 1.25
TYMS-202ENST00000323250 CACNA1SQ13698 1873 aa22.87■■□□□ 1.25
TYMS-202ENST00000323250 CEP350Q5VT06 3117 aa22.87■■□□□ 1.25
TYMS-202ENST00000323250 ARFGEF2Q9Y6D5 1785 aa22.86■■□□□ 1.25
TYMS-202ENST00000323250 NCBP3Q53F19 620 aaKnown RBP22.86■■□□□ 1.25
TYMS-202ENST00000323250 CCDC93Q567U6 631 aa22.86■■□□□ 1.25
TYMS-202ENST00000323250 FAM9BQ8IZU0 186 aa22.86■■□□□ 1.25
TYMS-202ENST00000323250 ISCA1Q9BUE6 129 aa22.86■■□□□ 1.25
TYMS-202ENST00000323250 RRAGCQ9HB90 399 aa22.86■■□□□ 1.25
TYMS-202ENST00000323250 ZC3H4Q9UPT8 1303 aaKnown RBP22.85■■□□□ 1.25
TYMS-202ENST00000323250 ATP5J2-PTCD1G3V325 749 aa22.85■■□□□ 1.25
TYMS-202ENST00000323250 HCLS1P14317 486 aaPredicted RBP22.85■■□□□ 1.25
TYMS-202ENST00000323250 SOGA3Q5TF21 947 aa22.85■■□□□ 1.25
TYMS-202ENST00000323250 RPGRQ92834 1020 aaKnown RBP22.85■■□□□ 1.25
TYMS-202ENST00000323250 KDM2BQ8NHM5 1336 aa22.84■■□□□ 1.25
TYMS-202ENST00000323250 SNED1Q8TER0 1413 aa22.84■■□□□ 1.25
TYMS-202ENST00000323250 TRMT112Q9UI30 125 aaKnown RBP22.84■■□□□ 1.25
TYMS-202ENST00000323250 GLTPD2A6NH11 291 aa22.83■■□□□ 1.25
TYMS-202ENST00000323250 TCERG1O14776 1098 aaKnown RBP22.83■■□□□ 1.25
TYMS-202ENST00000323250 NLRP3Q96P20 1036 aa22.83■■□□□ 1.25
TYMS-202ENST00000323250 CRAMP1Q96RY5 1269 aa22.83■■□□□ 1.25
TYMS-202ENST00000323250 IL16Q14005 1332 aa22.82■■□□□ 1.24
TYMS-202ENST00000323250 CCDC88AQ3V6T2 1871 aa22.82■■□□□ 1.24
TYMS-202ENST00000323250 FKBP4Q02790 459 aaKnown RBP eCLIP22.82■■□□□ 1.24
TYMS-202ENST00000323250 RBM17Q96I25 401 aaKnown RBP22.82■■□□□ 1.24
TYMS-202ENST00000323250 SPINK5Q9NQ38 1064 aaPredicted RBP22.82■■□□□ 1.24
TYMS-202ENST00000323250 ZNF277Q9NRM2 450 aaPredicted RBP22.82■■□□□ 1.24
TYMS-202ENST00000323250 ANKRD36CQ5JPF3 1778 aa22.81■■□□□ 1.24
TYMS-202ENST00000323250 TOMM70O94826 608 aa22.81■■□□□ 1.24
TYMS-202ENST00000323250 RNF123Q5XPI4 1314 aa22.81■■□□□ 1.24
TYMS-202ENST00000323250 SH3TC1Q8TE82 1336 aa22.81■■□□□ 1.24
TYMS-202ENST00000323250 POTECB2RU33 542 aa22.8■■□□□ 1.24
TYMS-202ENST00000323250 CCDC30Q5VVM6 783 aa22.8■■□□□ 1.24
TYMS-202ENST00000323250 RIC3Q7Z5B4 369 aa22.8■■□□□ 1.24
TYMS-202ENST00000323250 RTKN2Q8IZC4 609 aa22.8■■□□□ 1.24
TYMS-202ENST00000323250 FAM89AQ96GI7 184 aa22.8■■□□□ 1.24
TYMS-202ENST00000323250 FANCIQ9NVI1 1328 aa22.8■■□□□ 1.24
TYMS-202ENST00000323250 TWISTNBQ3B726 338 aaPredicted RBP22.79■■□□□ 1.24
TYMS-202ENST00000323250 WDR63Q8IWG1 891 aa22.79■■□□□ 1.24
TYMS-202ENST00000323250 TIAM2Q8IVF5 1701 aa22.79■■□□□ 1.24
TYMS-202ENST00000323250 ABCC4O15439 1325 aa22.79■■□□□ 1.24
TYMS-202ENST00000323250 PPEF1O14829 653 aaPredicted RBP22.78■■□□□ 1.24
TYMS-202ENST00000323250 GOLGA2Q08379 1002 aa22.78■■□□□ 1.24
TYMS-202ENST00000323250 TRIM28Q13263 835 aaKnown RBP22.78■■□□□ 1.24
TYMS-202ENST00000323250 RTL5Q5HYW3 569 aaPredicted RBP22.78■■□□□ 1.24
TYMS-202ENST00000323250 G2E3Q7L622 706 aa22.77■■□□□ 1.24
TYMS-202ENST00000323250 MYD88Q99836 296 aa22.77■■□□□ 1.24
TYMS-202ENST00000323250 DDNO94850 711 aaPredicted RBP22.76■■□□□ 1.23
TYMS-202ENST00000323250 HSPA6P17066 643 aa22.76■■□□□ 1.23
TYMS-202ENST00000323250 PSMD1Q99460 953 aa22.76■■□□□ 1.23
TYMS-202ENST00000323250 RBM46Q8TBY0 533 aaKnown RBP22.75■■□□□ 1.23
TYMS-202ENST00000323250 DICER1Q9UPY3 1922 aaKnown RBP22.74■■□□□ 1.23
TYMS-202ENST00000323250 VEGFAP15692 232 aaPredicted RBP22.74■■□□□ 1.23
TYMS-202ENST00000323250 IARSP41252 1262 aaKnown RBP22.74■■□□□ 1.23
TYMS-202ENST00000323250 EXOSC9Q06265 439 aaKnown RBP22.74■■□□□ 1.23
TYMS-202ENST00000323250 CC2D2BQ6DHV5 1058 aa22.74■■□□□ 1.23
TYMS-202ENST00000323250 DPY19L2Q6NUT2 758 aa22.74■■□□□ 1.23
TYMS-202ENST00000323250 JARID2Q92833 1246 aaPredicted RBP22.74■■□□□ 1.23
TYMS-202ENST00000323250 METTL22Q9BUU2 404 aaPredicted RBP22.74■■□□□ 1.23
TYMS-202ENST00000323250 ATP6V0A2Q9Y487 856 aa22.74■■□□□ 1.23
TYMS-202ENST00000323250 ZNF541Q9H0D2 1346 aa22.74■■□□□ 1.23
TYMS-202ENST00000323250 VAMP4O75379 141 aa22.73■■□□□ 1.23
TYMS-202ENST00000323250 SLC4A2P04920 1241 aa22.73■■□□□ 1.23
TYMS-202ENST00000323250 C16orf71Q8IYS4 520 aaPredicted RBP22.73■■□□□ 1.23
TYMS-202ENST00000323250 MAP3K2Q9Y2U5 619 aa22.73■■□□□ 1.23
TYMS-202ENST00000323250 COL4A5P29400 1685 aa22.73■■□□□ 1.23
TYMS-202ENST00000323250 LAMB2P55268 1798 aa22.73■■□□□ 1.23
TYMS-202ENST00000323250 PI4KAP2A4QPH2 592 aa22.72■■□□□ 1.23
TYMS-202ENST00000323250 SF3B3Q15393 1217 aaKnown RBP22.72■■□□□ 1.23
TYMS-202ENST00000323250 KSR2Q6VAB6 950 aa22.72■■□□□ 1.23
TYMS-202ENST00000323250 PI4KAP1Q8N8J0 262 aa22.72■■□□□ 1.23
TYMS-202ENST00000323250 IRS4O14654 1257 aaPredicted RBP22.71■■□□□ 1.23
TYMS-202ENST00000323250 BBOX1O75936 387 aa22.71■■□□□ 1.23
TYMS-202ENST00000323250 GRAPQ13588 217 aa22.71■■□□□ 1.23
TYMS-202ENST00000323250 DDX46Q7L014 1031 aaKnown RBP22.71■■□□□ 1.23
TYMS-202ENST00000323250 ZBTB38Q8NAP3 1195 aaPredicted RBP22.71■■□□□ 1.23
TYMS-202ENST00000323250 GRAPLQ8TC17 118 aaPredicted RBP22.71■■□□□ 1.23
TYMS-202ENST00000323250 STK31Q9BXU1 1019 aa22.71■■□□□ 1.23
TYMS-202ENST00000323250 CHMP4AQ9BY43 222 aa22.71■■□□□ 1.23
TYMS-202ENST00000323250 COL4A1P02462 1669 aa22.71■■□□□ 1.23
TYMS-202ENST00000323250 FZD9O00144 591 aa22.7■■□□□ 1.22
TYMS-202ENST00000323250 DDX58O95786 925 aaKnown RBP22.7■■□□□ 1.22
TYMS-202ENST00000323250 IGKV5-2P06315 115 aa22.7■■□□□ 1.22
TYMS-202ENST00000323250 CCDC191Q8NCU4 936 aa22.7■■□□□ 1.22
TYMS-202ENST00000323250 ZNF521Q96K83 1311 aa22.7■■□□□ 1.22
TYMS-202ENST00000323250 DDX60Q8IY21 1712 aaKnown RBP22.7■■□□□ 1.22
TYMS-202ENST00000323250 WDR90Q96KV7 1748 aa22.69■■□□□ 1.22
TYMS-202ENST00000323250 SP8Q8IXZ3 490 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms