RNA–Protein interactions for RNA: ENST00000321442.9

SFXN1-201, Transcript of sideroflexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN1, Length 4,231 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-201ENST00000321442 SYT1P21579 422 aa19.21■□□□□ 0.66
SFXN1-201ENST00000321442 PTGS1P23219 599 aa19.21■□□□□ 0.66
SFXN1-201ENST00000321442 CHMLP26374 656 aa19.2■□□□□ 0.66
SFXN1-201ENST00000321442 ANO10Q9NW15 660 aa19.2■□□□□ 0.66
SFXN1-201ENST00000321442 DNAJC25Q9H1X3 360 aa19.2■□□□□ 0.66
SFXN1-201ENST00000321442 INSRP06213 1382 aa19.2■□□□□ 0.66
SFXN1-201ENST00000321442 ANAPC15P60006 121 aa19.2■□□□□ 0.66
SFXN1-201ENST00000321442 LARP1Q6PKG0 1096 aaKnown RBP19.2■□□□□ 0.66
SFXN1-201ENST00000321442 FAM200AQ8TCP9 573 aa19.2■□□□□ 0.66
SFXN1-201ENST00000321442 EDC4Q6P2E9 1401 aaKnown RBP19.2■□□□□ 0.66
SFXN1-201ENST00000321442 STARD3NLO95772 234 aa19.19■□□□□ 0.66
SFXN1-201ENST00000321442 GSPT1P15170 499 aaKnown RBP19.19■□□□□ 0.66
SFXN1-201ENST00000321442 FSIP1Q8NA03 581 aa19.19■□□□□ 0.66
SFXN1-201ENST00000321442 SNRKQ9NRH2 765 aa19.19■□□□□ 0.66
SFXN1-201ENST00000321442 SAMD1Q6SPF0 538 aaPredicted RBP19.19■□□□□ 0.66
SFXN1-201ENST00000321442 JMYQ8N9B5 988 aa19.19■□□□□ 0.66
SFXN1-201ENST00000321442 MPHOSPH8Q99549 860 aa19.19■□□□□ 0.66
SFXN1-201ENST00000321442 SLAIN2Q9P270 581 aa19.19■□□□□ 0.66
SFXN1-201ENST00000321442 LUZP1Q86V48 1076 aa19.18■□□□□ 0.66
SFXN1-201ENST00000321442 TMCO3Q6UWJ1 677 aa19.18■□□□□ 0.66
SFXN1-201ENST00000321442 BCORL1Q5H9F3 1711 aa19.18■□□□□ 0.66
SFXN1-201ENST00000321442 CLTCL1P53675 1640 aa19.18■□□□□ 0.66
SFXN1-201ENST00000321442 RAB11FIP4Q86YS3 637 aa19.18■□□□□ 0.66
SFXN1-201ENST00000321442 CCP110O43303 1012 aa19.17■□□□□ 0.66
SFXN1-201ENST00000321442 ATP8B2P98198 1209 aa19.17■□□□□ 0.66
SFXN1-201ENST00000321442 ZBTB9Q96C00 473 aa19.17■□□□□ 0.66
SFXN1-201ENST00000321442 CEP126Q9P2H0 1117 aa19.17■□□□□ 0.66
SFXN1-201ENST00000321442 NAP1L1P55209 391 aaKnown RBP19.17■□□□□ 0.66
SFXN1-201ENST00000321442 ANKRD13DQ6ZTN6 518 aa19.17■□□□□ 0.66
SFXN1-201ENST00000321442 AKAP4Q5JQC9 854 aa19.17■□□□□ 0.66
SFXN1-201ENST00000321442 CEP135Q66GS9 1140 aa19.17■□□□□ 0.66
SFXN1-201ENST00000321442 TBC1D2BQ9UPU7 963 aa19.17■□□□□ 0.66
SFXN1-201ENST00000321442 RBM8AQ9Y5S9 174 aaKnown RBP19.16■□□□□ 0.66
SFXN1-201ENST00000321442 EFCAB6Q5THR3 1501 aa19.16■□□□□ 0.66
SFXN1-201ENST00000321442 POLR3DP05423 398 aaPredicted RBP19.16■□□□□ 0.66
SFXN1-201ENST00000321442 TRMT112Q9UI30 125 aaKnown RBP19.16■□□□□ 0.66
SFXN1-201ENST00000321442 SKILP12757 684 aa19.16■□□□□ 0.66
SFXN1-201ENST00000321442 TMC6Q7Z403 805 aa19.16■□□□□ 0.66
SFXN1-201ENST00000321442 CAGE1Q8TC20 777 aa19.16■□□□□ 0.66
SFXN1-201ENST00000321442 BRF1Q92994 677 aa19.16■□□□□ 0.66
SFXN1-201ENST00000321442 CWC15Q9P013 229 aaKnown RBP19.16■□□□□ 0.66
SFXN1-201ENST00000321442 CCDC158Q5M9N0 1113 aa19.15■□□□□ 0.66
SFXN1-201ENST00000321442 CCDC82Q8N4S0 544 aa19.15■□□□□ 0.66
SFXN1-201ENST00000321442 CCDC94Q9BW85 323 aaPredicted RBP19.15■□□□□ 0.66
SFXN1-201ENST00000321442 PDIA4P13667 645 aaKnown RBP19.15■□□□□ 0.66
SFXN1-201ENST00000321442 TYRO3Q06418 890 aa19.15■□□□□ 0.66
SFXN1-201ENST00000321442 EVI5LQ96CN4 794 aa19.15■□□□□ 0.66
SFXN1-201ENST00000321442 ACBD3Q9H3P7 528 aa19.15■□□□□ 0.66
SFXN1-201ENST00000321442 TTC39AQ5SRH9 613 aa19.15■□□□□ 0.66
SFXN1-201ENST00000321442 LEKR1Q6ZMV7 388 aa19.15■□□□□ 0.66
SFXN1-201ENST00000321442 SNRPA1P09661 255 aaKnown RBP19.14■□□□□ 0.66
SFXN1-201ENST00000321442 IL17REQ8NFR9 667 aa19.14■□□□□ 0.66
SFXN1-201ENST00000321442 KLHDC4Q8TBB5 520 aa19.14■□□□□ 0.66
SFXN1-201ENST00000321442 INTS4Q96HW7 963 aaKnown RBP19.14■□□□□ 0.66
SFXN1-201ENST00000321442 WWC3Q9ULE0 1092 aa19.14■□□□□ 0.66
SFXN1-201ENST00000321442 TMEM94Q12767 1356 aa19.14■□□□□ 0.66
SFXN1-201ENST00000321442 FILIP1LQ4L180 1135 aa19.14■□□□□ 0.65
SFXN1-201ENST00000321442 PPFIBP1Q86W92 1011 aa19.14■□□□□ 0.65
SFXN1-201ENST00000321442 CCAR1Q8IX12 1150 aaKnown RBP19.14■□□□□ 0.65
SFXN1-201ENST00000321442 GTF2F1P35269 517 aaKnown RBP eCLIP19.14■□□□□ 0.659e-7■■■■□ 24.5
SFXN1-201ENST00000321442 IDH1O75874 414 aaKnown RBP19.14■□□□□ 0.65
SFXN1-201ENST00000321442 AXDND1Q5T1B0 1012 aaPredicted RBP19.14■□□□□ 0.65
SFXN1-201ENST00000321442 HYPKQ9NX55 129 aa19.14■□□□□ 0.65
SFXN1-201ENST00000321442 HSP90AA4PQ58FG1 418 aa19.13■□□□□ 0.65
SFXN1-201ENST00000321442 PPP1R9BQ96SB3 815 aa19.13■□□□□ 0.65
SFXN1-201ENST00000321442 RUFY1Q96T51 708 aa19.13■□□□□ 0.65
SFXN1-201ENST00000321442 ABCF2Q9UG63 623 aa19.13■□□□□ 0.65
SFXN1-201ENST00000321442 C8orf76Q96K31 380 aa19.13■□□□□ 0.65
SFXN1-201ENST00000321442 ZSWIM4Q9H7M6 989 aa19.13■□□□□ 0.65
SFXN1-201ENST00000321442 NUP133Q8WUM0 1156 aa19.13■□□□□ 0.65
SFXN1-201ENST00000321442 ERBB4Q15303 1308 aa19.12■□□□□ 0.65
SFXN1-201ENST00000321442 KLHL10Q6JEL2 608 aa19.12■□□□□ 0.65
SFXN1-201ENST00000321442 GPT2Q8TD30 523 aa19.12■□□□□ 0.65
SFXN1-201ENST00000321442 RNMTO43148 476 aaKnown RBP19.12■□□□□ 0.65
SFXN1-201ENST00000321442 NOM1Q5C9Z4 860 aaKnown RBP19.12■□□□□ 0.65
SFXN1-201ENST00000321442 AK7Q96M32 723 aa19.12■□□□□ 0.65
SFXN1-201ENST00000321442 SMTNL1A8MU46 457 aa19.12■□□□□ 0.65
SFXN1-201ENST00000321442 VPS53Q5VIR6 699 aa19.12■□□□□ 0.65
SFXN1-201ENST00000321442 METTL24Q5JXM2 366 aa19.11■□□□□ 0.65
SFXN1-201ENST00000321442 NEK1Q96PY6 1258 aa19.11■□□□□ 0.65
SFXN1-201ENST00000321442 HAND2P61296 217 aa19.11■□□□□ 0.65
SFXN1-201ENST00000321442 SNW1Q13573 536 aaKnown RBP19.11■□□□□ 0.65
SFXN1-201ENST00000321442 ZNF335Q9H4Z2 1342 aaPredicted RBP19.11■□□□□ 0.65
SFXN1-201ENST00000321442 U3KPZ7 1027 aaPredicted RBP19.11■□□□□ 0.65
SFXN1-201ENST00000321442 PATL2C9JE40 543 aaKnown RBP19.11■□□□□ 0.65
SFXN1-201ENST00000321442 KIF2AO00139 706 aaPredicted RBP19.11■□□□□ 0.65
SFXN1-201ENST00000321442 A1BGP04217 495 aa19.11■□□□□ 0.65
SFXN1-201ENST00000321442 IL2RBP14784 551 aa19.11■□□□□ 0.65
SFXN1-201ENST00000321442 SETQ01105 290 aaPredicted RBP19.11■□□□□ 0.65
SFXN1-201ENST00000321442 CCDC102AQ96A19 550 aa19.11■□□□□ 0.65
SFXN1-201ENST00000321442 IQSEC3Q9UPP2 1182 aaPredicted RBP19.11■□□□□ 0.65
SFXN1-201ENST00000321442 SBNO2Q9Y2G9 1366 aa19.1■□□□□ 0.65
SFXN1-201ENST00000321442 LMTK3Q96Q04 1460 aa19.1■□□□□ 0.65
SFXN1-201ENST00000321442 CHL1O00533 1208 aa19.1■□□□□ 0.65
SFXN1-201ENST00000321442 SART3Q15020 963 aaKnown RBP19.1■□□□□ 0.65
SFXN1-201ENST00000321442 DDX46Q7L014 1031 aaKnown RBP19.1■□□□□ 0.65
SFXN1-201ENST00000321442 CPLX3Q8WVH0 158 aa19.1■□□□□ 0.65
SFXN1-201ENST00000321442 MAP3K5Q99683 1374 aa19.1■□□□□ 0.65
SFXN1-201ENST00000321442 PNMA6EA0A0J9YXQ4 647 aa19.1■□□□□ 0.65
SFXN1-201ENST00000321442 CBFA2T2O43439 604 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms