RNA–Protein interactions for RNA: ENST00000321331.11

HIGD1A-201, Transcript of HIG1 hypoxia inducible domain family member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIGD1A, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1A-201ENST00000321331 SLC4A2P04920 1241 aa25.46■■□□□ 1.67
HIGD1A-201ENST00000321331 ARHGAP27Q6ZUM4 889 aa25.46■■□□□ 1.67
HIGD1A-201ENST00000321331 CNKSR1Q969H4 720 aa25.46■■□□□ 1.67
HIGD1A-201ENST00000321331 ABCC12Q96J65 1359 aa25.46■■□□□ 1.67
HIGD1A-201ENST00000321331 ARFGEF2Q9Y6D5 1785 aa25.46■■□□□ 1.67
HIGD1A-201ENST00000321331 RIC1Q4ADV7 1423 aa25.45■■□□□ 1.67
HIGD1A-201ENST00000321331 NPR1P16066 1061 aa25.44■■□□□ 1.66
HIGD1A-201ENST00000321331 ISCA1Q9BUE6 129 aa25.44■■□□□ 1.66
HIGD1A-201ENST00000321331 SLFN5Q08AF3 891 aa25.44■■□□□ 1.66
HIGD1A-201ENST00000321331 TRMT112Q9UI30 125 aaKnown RBP25.44■■□□□ 1.66
HIGD1A-201ENST00000321331 CACNA1FO60840 1977 aa25.43■■□□□ 1.66
HIGD1A-201ENST00000321331 ATP5J2-PTCD1G3V325 749 aa25.43■■□□□ 1.66
HIGD1A-201ENST00000321331 TRIM28Q13263 835 aaKnown RBP25.42■■□□□ 1.66
HIGD1A-201ENST00000321331 KSR2Q6VAB6 950 aa25.42■■□□□ 1.66
HIGD1A-201ENST00000321331 SH3TC1Q8TE82 1336 aa25.41■■□□□ 1.66
HIGD1A-201ENST00000321331 TNRC6CQ9HCJ0 1690 aaKnown RBP25.41■■□□□ 1.66
HIGD1A-201ENST00000321331 CRY2Q49AN0 593 aa25.41■■□□□ 1.66
HIGD1A-201ENST00000321331 SLC10A5Q5PT55 438 aa25.41■■□□□ 1.66
HIGD1A-201ENST00000321331 NLRP3Q96P20 1036 aa25.41■■□□□ 1.66
HIGD1A-201ENST00000321331 MYD88Q99836 296 aa25.41■■□□□ 1.66
HIGD1A-201ENST00000321331 MAP3K2Q9Y2U5 619 aa25.41■■□□□ 1.66
HIGD1A-201ENST00000321331 ALDH1B1P30837 517 aa25.4■■□□□ 1.66
HIGD1A-201ENST00000321331 FLIIQ13045 1269 aa25.4■■□□□ 1.66
HIGD1A-201ENST00000321331 G2E3Q7L622 706 aa25.4■■□□□ 1.66
HIGD1A-201ENST00000321331 RPGRQ92834 1020 aaKnown RBP25.4■■□□□ 1.66
HIGD1A-201ENST00000321331 METTL22Q9BUU2 404 aaPredicted RBP25.4■■□□□ 1.66
HIGD1A-201ENST00000321331 PI4KAP2A4QPH2 592 aa25.39■■□□□ 1.65
HIGD1A-201ENST00000321331 PRPF40BQ6NWY9 871 aaKnown RBP25.39■■□□□ 1.65
HIGD1A-201ENST00000321331 PI4KAP1Q8N8J0 262 aa25.39■■□□□ 1.65
HIGD1A-201ENST00000321331 CDCA7LQ96GN5 454 aa25.39■■□□□ 1.65
HIGD1A-201ENST00000321331 NEXNQ0ZGT2 675 aa25.38■■□□□ 1.65
HIGD1A-201ENST00000321331 CACNA1SQ13698 1873 aa25.37■■□□□ 1.65
HIGD1A-201ENST00000321331 C21orf2O43822 256 aa25.37■■□□□ 1.65
HIGD1A-201ENST00000321331 FKBP5Q13451 457 aaPredicted RBP25.37■■□□□ 1.65
HIGD1A-201ENST00000321331 CCDC191Q8NCU4 936 aa25.37■■□□□ 1.65
HIGD1A-201ENST00000321331 ZNF219Q9P2Y4 722 aaPredicted RBP25.37■■□□□ 1.65
HIGD1A-201ENST00000321331 ADCY9O60503 1353 aa25.37■■□□□ 1.65
HIGD1A-201ENST00000321331 SOGA3Q5TF21 947 aa25.36■■□□□ 1.65
HIGD1A-201ENST00000321331 SLX4Q8IY92 1834 aa25.36■■□□□ 1.65
HIGD1A-201ENST00000321331 HOXA10P31260 410 aaPredicted RBP25.35■■□□□ 1.65
HIGD1A-201ENST00000321331 ZNF428Q96B54 188 aa25.35■■□□□ 1.65
HIGD1A-201ENST00000321331 RBM17Q96I25 401 aaKnown RBP25.35■■□□□ 1.65
HIGD1A-201ENST00000321331 CWC25Q9NXE8 425 aaPredicted RBP25.35■■□□□ 1.65
HIGD1A-201ENST00000321331 HCLS1P14317 486 aaPredicted RBP25.34■■□□□ 1.65
HIGD1A-201ENST00000321331 HNRNPUQ00839 825 aaKnown RBP eCLIP25.34■■□□□ 1.65
HIGD1A-201ENST00000321331 TRMT2AQ8IZ69 625 aaKnown RBP25.34■■□□□ 1.65
HIGD1A-201ENST00000321331 SYNE4Q8N205 404 aa25.34■■□□□ 1.65
HIGD1A-201ENST00000321331 FAM89AQ96GI7 184 aa25.34■■□□□ 1.65
HIGD1A-201ENST00000321331 C3orf67Q6ZVT6 689 aa25.33■■□□□ 1.65
HIGD1A-201ENST00000321331 ZBTB38Q8NAP3 1195 aaPredicted RBP25.33■■□□□ 1.65
HIGD1A-201ENST00000321331 HSP90B1P14625 803 aaKnown RBP25.32■■□□□ 1.64
HIGD1A-201ENST00000321331 CRAMP1Q96RY5 1269 aa25.32■■□□□ 1.64
HIGD1A-201ENST00000321331 RTL5Q5HYW3 569 aaPredicted RBP25.31■■□□□ 1.64
HIGD1A-201ENST00000321331 DNAAF4Q8WXU2 420 aa25.31■■□□□ 1.64
HIGD1A-201ENST00000321331 IRS4O14654 1257 aaPredicted RBP25.31■■□□□ 1.64
HIGD1A-201ENST00000321331 ZNF784Q8NCA9 323 aaPredicted RBP25.31■■□□□ 1.64
HIGD1A-201ENST00000321331 PCCAP05165 728 aaPredicted RBP25.3■■□□□ 1.64
HIGD1A-201ENST00000321331 IGKV5-2P06315 115 aa25.3■■□□□ 1.64
HIGD1A-201ENST00000321331 RASSF7Q02833 373 aa25.3■■□□□ 1.64
HIGD1A-201ENST00000321331 CCDC93Q567U6 631 aa25.3■■□□□ 1.64
HIGD1A-201ENST00000321331 C9orf131Q5VYM1 1079 aa25.3■■□□□ 1.64
HIGD1A-201ENST00000321331 C7orf43Q8WVR3 580 aa25.3■■□□□ 1.64
HIGD1A-201ENST00000321331 NFKBIEO00221 500 aa25.29■■□□□ 1.64
HIGD1A-201ENST00000321331 CT47B1P0C2W7 299 aaPredicted RBP25.29■■□□□ 1.64
HIGD1A-201ENST00000321331 RNF181Q9P0P0 153 aa25.29■■□□□ 1.64
HIGD1A-201ENST00000321331 LAMB2P55268 1798 aa25.28■■□□□ 1.64
HIGD1A-201ENST00000321331 DDX60Q8IY21 1712 aaKnown RBP25.28■■□□□ 1.64
HIGD1A-201ENST00000321331 LMNB1P20700 586 aa25.28■■□□□ 1.64
HIGD1A-201ENST00000321331 DDX46Q7L014 1031 aaKnown RBP25.28■■□□□ 1.64
HIGD1A-201ENST00000321331 TAOK3Q9H2K8 898 aa25.28■■□□□ 1.64
HIGD1A-201ENST00000321331 FER1L6Q2WGJ9 1857 aa25.27■■□□□ 1.64
HIGD1A-201ENST00000321331 NEURL1BA8MQ27 555 aa25.27■■□□□ 1.64
HIGD1A-201ENST00000321331 CWF19L2Q2TBE0 894 aaKnown RBP25.27■■□□□ 1.64
HIGD1A-201ENST00000321331 CC2D2BQ6DHV5 1058 aa25.27■■□□□ 1.64
HIGD1A-201ENST00000321331 LTBP3Q9NS15 1303 aa25.26■■□□□ 1.63
HIGD1A-201ENST00000321331 SBF1O95248 1867 aa25.26■■□□□ 1.63
HIGD1A-201ENST00000321331 SF3B3Q15393 1217 aaKnown RBP25.26■■□□□ 1.63
HIGD1A-201ENST00000321331 ALDH1L2Q3SY69 923 aa25.26■■□□□ 1.63
HIGD1A-201ENST00000321331 MRPL50Q8N5N7 158 aaKnown RBP25.26■■□□□ 1.63
HIGD1A-201ENST00000321331 LINS1Q8NG48 757 aa25.26■■□□□ 1.63
HIGD1A-201ENST00000321331 TMX4Q9H1E5 349 aaPredicted RBP25.26■■□□□ 1.63
HIGD1A-201ENST00000321331 ABCC4O15439 1325 aa25.25■■□□□ 1.63
HIGD1A-201ENST00000321331 PPEF1O14829 653 aaPredicted RBP25.25■■□□□ 1.63
HIGD1A-201ENST00000321331 RTKN2Q8IZC4 609 aa25.25■■□□□ 1.63
HIGD1A-201ENST00000321331 SSH1Q8WYL5 1049 aa25.25■■□□□ 1.63
HIGD1A-201ENST00000321331 F6X3S4 739 aa25.24■■□□□ 1.63
HIGD1A-201ENST00000321331 CDHR2Q9BYE9 1310 aa25.23■■□□□ 1.63
HIGD1A-201ENST00000321331 PDE8AO60658 829 aa25.23■■□□□ 1.63
HIGD1A-201ENST00000321331 BBOX1O75936 387 aa25.23■■□□□ 1.63
HIGD1A-201ENST00000321331 JARID2Q92833 1246 aaPredicted RBP25.23■■□□□ 1.63
HIGD1A-201ENST00000321331 GRAPQ13588 217 aa25.22■■□□□ 1.63
HIGD1A-201ENST00000321331 GCKRQ14397 625 aa25.22■■□□□ 1.63
HIGD1A-201ENST00000321331 GRIPAP1Q4V328 841 aa25.22■■□□□ 1.63
HIGD1A-201ENST00000321331 OLFM4Q6UX06 510 aa25.22■■□□□ 1.63
HIGD1A-201ENST00000321331 GRAPLQ8TC17 118 aaPredicted RBP25.22■■□□□ 1.63
HIGD1A-201ENST00000321331 PTPRCP08575 1304 aa25.22■■□□□ 1.63
HIGD1A-201ENST00000321331 FKBP4Q02790 459 aaKnown RBP eCLIP25.21■■□□□ 1.63
HIGD1A-201ENST00000321331 BCL2L13Q9BXK5 485 aa25.21■■□□□ 1.63
HIGD1A-201ENST00000321331 SMC4Q9NTJ3 1288 aa25.21■■□□□ 1.63
HIGD1A-201ENST00000321331 ZC3H4Q9UPT8 1303 aaKnown RBP25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms