RNA–Protein interactions for RNA: ENST00000321253.6

TUBA3D-201, Transcript of tubulin alpha 3d, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA3D, Length 1,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3D-201ENST00000321253 TCERG1O14776 1098 aaKnown RBP18.84■□□□□ 0.61
TUBA3D-201ENST00000321253 RIC1Q4ADV7 1423 aa18.84■□□□□ 0.61
TUBA3D-201ENST00000321253 ZNF521Q96K83 1311 aa18.83■□□□□ 0.61
TUBA3D-201ENST00000321253 PRPF40BQ6NWY9 871 aaKnown RBP18.83■□□□□ 0.6
TUBA3D-201ENST00000321253 MIER1Q8N108 512 aa18.83■□□□□ 0.6
TUBA3D-201ENST00000321253 ZNF219Q9P2Y4 722 aaPredicted RBP18.83■□□□□ 0.6
TUBA3D-201ENST00000321253 TRMT112Q9UI30 125 aaKnown RBP18.83■□□□□ 0.6
TUBA3D-201ENST00000321253 ARFGEF2Q9Y6D5 1785 aa18.83■□□□□ 0.6
TUBA3D-201ENST00000321253 TNRC6CQ9HCJ0 1690 aaKnown RBP18.83■□□□□ 0.6
TUBA3D-201ENST00000321253 C21orf2O43822 256 aa18.82■□□□□ 0.6
TUBA3D-201ENST00000321253 RPGRQ92834 1020 aaKnown RBP18.82■□□□□ 0.6
TUBA3D-201ENST00000321253 CACNA1SQ13698 1873 aa18.81■□□□□ 0.6
TUBA3D-201ENST00000321253 ATP5J2-PTCD1G3V325 749 aa18.81■□□□□ 0.6
TUBA3D-201ENST00000321253 SLC4A2P04920 1241 aa18.81■□□□□ 0.6
TUBA3D-201ENST00000321253 CRY2Q49AN0 593 aa18.81■□□□□ 0.6
TUBA3D-201ENST00000321253 SH3TC1Q8TE82 1336 aa18.81■□□□□ 0.6
TUBA3D-201ENST00000321253 VAMP4O75379 141 aa18.8■□□□□ 0.6
TUBA3D-201ENST00000321253 ALDH1B1P30837 517 aa18.8■□□□□ 0.6
TUBA3D-201ENST00000321253 SOGA3Q5TF21 947 aa18.8■□□□□ 0.6
TUBA3D-201ENST00000321253 NLRP3Q96P20 1036 aa18.8■□□□□ 0.6
TUBA3D-201ENST00000321253 ISCA1Q9BUE6 129 aa18.8■□□□□ 0.6
TUBA3D-201ENST00000321253 ADCY9O60503 1353 aa18.8■□□□□ 0.6
TUBA3D-201ENST00000321253 SLX4Q8IY92 1834 aa18.8■□□□□ 0.6
TUBA3D-201ENST00000321253 SLC10A5Q5PT55 438 aa18.79■□□□□ 0.6
TUBA3D-201ENST00000321253 E9PSI1 815 aa18.79■□□□□ 0.6
TUBA3D-201ENST00000321253 RASSF7Q02833 373 aa18.79■□□□□ 0.6
TUBA3D-201ENST00000321253 TRIM28Q13263 835 aaKnown RBP18.79■□□□□ 0.6
TUBA3D-201ENST00000321253 C9orf131Q5VYM1 1079 aa18.79■□□□□ 0.6
TUBA3D-201ENST00000321253 ZNF428Q96B54 188 aa18.79■□□□□ 0.6
TUBA3D-201ENST00000321253 MYD88Q99836 296 aa18.79■□□□□ 0.6
TUBA3D-201ENST00000321253 KSR2Q6VAB6 950 aa18.78■□□□□ 0.6
TUBA3D-201ENST00000321253 RBM17Q96I25 401 aaKnown RBP18.78■□□□□ 0.6
TUBA3D-201ENST00000321253 RNF181Q9P0P0 153 aa18.78■□□□□ 0.6
TUBA3D-201ENST00000321253 MAP3K2Q9Y2U5 619 aa18.78■□□□□ 0.6
TUBA3D-201ENST00000321253 HCLS1P14317 486 aaPredicted RBP18.77■□□□□ 0.6
TUBA3D-201ENST00000321253 METTL22Q9BUU2 404 aaPredicted RBP18.77■□□□□ 0.6
TUBA3D-201ENST00000321253 PI4KAP2A4QPH2 592 aa18.76■□□□□ 0.59
TUBA3D-201ENST00000321253 CACNA1FO60840 1977 aa18.76■□□□□ 0.59
TUBA3D-201ENST00000321253 LMNB1P20700 586 aa18.76■□□□□ 0.59
TUBA3D-201ENST00000321253 HOXA10P31260 410 aaPredicted RBP18.76■□□□□ 0.59
TUBA3D-201ENST00000321253 NEXNQ0ZGT2 675 aa18.76■□□□□ 0.59
TUBA3D-201ENST00000321253 FLIIQ13045 1269 aa18.76■□□□□ 0.59
TUBA3D-201ENST00000321253 C3orf67Q6ZVT6 689 aa18.76■□□□□ 0.59
TUBA3D-201ENST00000321253 G2E3Q7L622 706 aa18.76■□□□□ 0.59
TUBA3D-201ENST00000321253 SYNE4Q8N205 404 aa18.76■□□□□ 0.59
TUBA3D-201ENST00000321253 PI4KAP1Q8N8J0 262 aa18.76■□□□□ 0.59
TUBA3D-201ENST00000321253 FAM89AQ96GI7 184 aa18.76■□□□□ 0.59
TUBA3D-201ENST00000321253 NFKBIEO00221 500 aa18.75■□□□□ 0.59
TUBA3D-201ENST00000321253 FKBP5Q13451 457 aaPredicted RBP18.75■□□□□ 0.59
TUBA3D-201ENST00000321253 CCDC93Q567U6 631 aa18.75■□□□□ 0.59
TUBA3D-201ENST00000321253 CCDC191Q8NCU4 936 aa18.75■□□□□ 0.59
TUBA3D-201ENST00000321253 ZNF526Q8TF50 670 aaPredicted RBP18.75■□□□□ 0.59
TUBA3D-201ENST00000321253 TAOK3Q9H2K8 898 aa18.75■□□□□ 0.59
TUBA3D-201ENST00000321253 C7orf43Q8WVR3 580 aa18.74■□□□□ 0.59
TUBA3D-201ENST00000321253 CRAMP1Q96RY5 1269 aa18.74■□□□□ 0.59
TUBA3D-201ENST00000321253 GPBP1L1Q9HC44 474 aaPredicted RBP18.74■□□□□ 0.59
TUBA3D-201ENST00000321253 CWC25Q9NXE8 425 aaPredicted RBP18.74■□□□□ 0.59
TUBA3D-201ENST00000321253 SBF1O95248 1867 aa18.74■□□□□ 0.59
TUBA3D-201ENST00000321253 SLFN5Q08AF3 891 aa18.74■□□□□ 0.59
TUBA3D-201ENST00000321253 RTL5Q5HYW3 569 aaPredicted RBP18.74■□□□□ 0.59
TUBA3D-201ENST00000321253 ZBTB38Q8NAP3 1195 aaPredicted RBP18.74■□□□□ 0.59
TUBA3D-201ENST00000321253 FER1L6Q2WGJ9 1857 aa18.73■□□□□ 0.59
TUBA3D-201ENST00000321253 LTBP3Q9NS15 1303 aa18.73■□□□□ 0.59
TUBA3D-201ENST00000321253 HSP90B1P14625 803 aaKnown RBP18.73■□□□□ 0.59
TUBA3D-201ENST00000321253 IRS4O14654 1257 aaPredicted RBP18.72■□□□□ 0.59
TUBA3D-201ENST00000321253 PPEF1O14829 653 aaPredicted RBP18.72■□□□□ 0.59
TUBA3D-201ENST00000321253 DDX46Q7L014 1031 aaKnown RBP18.72■□□□□ 0.59
TUBA3D-201ENST00000321253 RTKN2Q8IZC4 609 aa18.72■□□□□ 0.59
TUBA3D-201ENST00000321253 TMX4Q9H1E5 349 aaPredicted RBP18.72■□□□□ 0.59
TUBA3D-201ENST00000321253 LAMB2P55268 1798 aa18.71■□□□□ 0.59
TUBA3D-201ENST00000321253 CC2D2BQ6DHV5 1058 aa18.71■□□□□ 0.59
TUBA3D-201ENST00000321253 CDCA7LQ96GN5 454 aa18.71■□□□□ 0.59
TUBA3D-201ENST00000321253 DDX60Q8IY21 1712 aaKnown RBP18.71■□□□□ 0.59
TUBA3D-201ENST00000321253 ABCC4O15439 1325 aa18.71■□□□□ 0.58
TUBA3D-201ENST00000321253 ZC3H4Q9UPT8 1303 aaKnown RBP18.71■□□□□ 0.58
TUBA3D-201ENST00000321253 PCCAP05165 728 aaPredicted RBP18.7■□□□□ 0.58
TUBA3D-201ENST00000321253 OLFM4Q6UX06 510 aa18.7■□□□□ 0.58
TUBA3D-201ENST00000321253 DNAAF4Q8WXU2 420 aa18.7■□□□□ 0.58
TUBA3D-201ENST00000321253 IGKV5-2P06315 115 aa18.69■□□□□ 0.58
TUBA3D-201ENST00000321253 PRELPP51888 382 aa18.69■□□□□ 0.58
TUBA3D-201ENST00000321253 FKBP4Q02790 459 aaKnown RBP eCLIP18.69■□□□□ 0.58
TUBA3D-201ENST00000321253 CCDC88AQ3V6T2 1871 aa18.69■□□□□ 0.58
TUBA3D-201ENST00000321253 GRIPAP1Q4V328 841 aa18.69■□□□□ 0.58
TUBA3D-201ENST00000321253 NEURL1BA8MQ27 555 aa18.68■□□□□ 0.58
TUBA3D-201ENST00000321253 BBOX1O75936 387 aa18.68■□□□□ 0.58
TUBA3D-201ENST00000321253 GRAPQ13588 217 aa18.68■□□□□ 0.58
TUBA3D-201ENST00000321253 SF3B3Q15393 1217 aaKnown RBP18.68■□□□□ 0.58
TUBA3D-201ENST00000321253 CWF19L2Q2TBE0 894 aaKnown RBP18.68■□□□□ 0.58
TUBA3D-201ENST00000321253 GRAPLQ8TC17 118 aaPredicted RBP18.68■□□□□ 0.58
TUBA3D-201ENST00000321253 TIAM2Q8IVF5 1701 aa18.67■□□□□ 0.58
TUBA3D-201ENST00000321253 KDM2BQ8NHM5 1336 aa18.67■□□□□ 0.58
TUBA3D-201ENST00000321253 JARID2Q92833 1246 aaPredicted RBP18.67■□□□□ 0.58
TUBA3D-201ENST00000321253 PDE8AO60658 829 aa18.66■□□□□ 0.58
TUBA3D-201ENST00000321253 LINS1Q8NG48 757 aa18.66■□□□□ 0.58
TUBA3D-201ENST00000321253 ATP6V0A2Q9Y487 856 aa18.66■□□□□ 0.58
TUBA3D-201ENST00000321253 CDHR2Q9BYE9 1310 aa18.66■□□□□ 0.58
TUBA3D-201ENST00000321253 F6X3S4 739 aa18.65■□□□□ 0.58
TUBA3D-201ENST00000321253 HNRNPUQ00839 825 aaKnown RBP eCLIP18.65■□□□□ 0.58
TUBA3D-201ENST00000321253 TRMT2AQ8IZ69 625 aaKnown RBP18.65■□□□□ 0.58
TUBA3D-201ENST00000321253 PSMD1Q99460 953 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms