RNA–Protein interactions for RNA: ENST00000321110.1

RTL3-201, Transcript of retrotransposon Gag like 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RTL3, Length 2,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3-201ENST00000321110 DIP2BQ9P265 1576 aa9.35□□□□□ -0.91
RTL3-201ENST00000321110 CD163L1Q9NR16 1453 aa9.35□□□□□ -0.91
RTL3-201ENST00000321110 EPB41L2O43491 1005 aaKnown RBP9.35□□□□□ -0.91
RTL3-201ENST00000321110 DCTN1Q14203 1278 aa9.35□□□□□ -0.91
RTL3-201ENST00000321110 SMC1AQ14683 1233 aaKnown RBP9.35□□□□□ -0.91
RTL3-201ENST00000321110 GORABQ5T7V8 394 aa9.35□□□□□ -0.91
RTL3-201ENST00000321110 LRRCC1Q9C099 1032 aa9.35□□□□□ -0.91
RTL3-201ENST00000321110 EPC1Q9H2F5 836 aa9.35□□□□□ -0.91
RTL3-201ENST00000321110 BRMS1Q9HCU9 246 aa9.35□□□□□ -0.91
RTL3-201ENST00000321110 ARGLU1Q9NWB6 273 aaPredicted RBP9.35□□□□□ -0.91
RTL3-201ENST00000321110 CWC15Q9P013 229 aaKnown RBP9.35□□□□□ -0.91
RTL3-201ENST00000321110 NPATQ14207 1427 aa9.34□□□□□ -0.91
RTL3-201ENST00000321110 CDK12Q9NYV4 1490 aaPredicted RBP9.34□□□□□ -0.91
RTL3-201ENST00000321110 ARHGEF28Q8N1W1 1705 aaKnown RBP9.34□□□□□ -0.91
RTL3-201ENST00000321110 GNAI3P08754 354 aa9.34□□□□□ -0.91
RTL3-201ENST00000321110 SAFB2Q14151 953 aaKnown RBP eCLIP9.34□□□□□ -0.91
RTL3-201ENST00000321110 UBXN4Q92575 508 aa9.34□□□□□ -0.91
RTL3-201ENST00000321110 CCDC34Q96HJ3 373 aa9.34□□□□□ -0.91
RTL3-201ENST00000321110 LSG1Q9H089 658 aaKnown RBP9.34□□□□□ -0.91
RTL3-201ENST00000321110 TFIP11Q9UBB9 837 aaKnown RBP9.34□□□□□ -0.91
RTL3-201ENST00000321110 STAP2Q9UGK3 403 aa9.34□□□□□ -0.91
RTL3-201ENST00000321110 GOLGA6L19H0YKK7 550 aa9.34□□□□□ -0.91
RTL3-201ENST00000321110 SGSM2O43147 1006 aa9.34□□□□□ -0.91
RTL3-201ENST00000321110 AXDND1Q5T1B0 1012 aaPredicted RBP9.34□□□□□ -0.91
RTL3-201ENST00000321110 NECAB1Q8N987 351 aa9.34□□□□□ -0.91
RTL3-201ENST00000321110 IQUBQ8NA54 791 aa9.34□□□□□ -0.91
RTL3-201ENST00000321110 PGBD1Q96JS3 809 aa9.34□□□□□ -0.91
RTL3-201ENST00000321110 DRC1Q96MC2 740 aa9.34□□□□□ -0.91
RTL3-201ENST00000321110 BCCIPQ9P287 314 aaKnown RBP eCLIP9.34□□□□□ -0.91
RTL3-201ENST00000321110 RIMS2Q9UQ26 1411 aa9.33□□□□□ -0.92
RTL3-201ENST00000321110 NPHP3Q7Z494 1330 aa9.33□□□□□ -0.92
RTL3-201ENST00000321110 A0A1B0GUL7 405 aa9.33□□□□□ -0.92
RTL3-201ENST00000321110 FANCGO15287 622 aa9.33□□□□□ -0.92
RTL3-201ENST00000321110 ATP8B1O43520 1251 aa9.33□□□□□ -0.92
RTL3-201ENST00000321110 TADA3O75528 432 aa9.33□□□□□ -0.92
RTL3-201ENST00000321110 MAP4K4O95819 1239 aaPredicted RBP9.33□□□□□ -0.92
RTL3-201ENST00000321110 LMAN1P49257 510 aa9.33□□□□□ -0.92
RTL3-201ENST00000321110 LEO1Q8WVC0 666 aaPredicted RBP9.33□□□□□ -0.92
RTL3-201ENST00000321110 HECW2Q9P2P5 1572 aa9.33□□□□□ -0.92
RTL3-201ENST00000321110 ADAM21Q9UKJ8 722 aa9.33□□□□□ -0.92
RTL3-201ENST00000321110 FRMPD1Q5SYB0 1578 aa9.33□□□□□ -0.92
RTL3-201ENST00000321110 YTHDC2Q9H6S0 1430 aaKnown RBP9.33□□□□□ -0.92
RTL3-201ENST00000321110 A0A087WWV3 80 aa9.33□□□□□ -0.92
RTL3-201ENST00000321110 GOLGA6L4A6NEF3 574 aa9.33□□□□□ -0.92
RTL3-201ENST00000321110 SART3Q15020 963 aaKnown RBP9.33□□□□□ -0.92
RTL3-201ENST00000321110 ME3Q16798 604 aa9.33□□□□□ -0.92
RTL3-201ENST00000321110 LARP1BQ659C4 914 aaKnown RBP9.33□□□□□ -0.92
RTL3-201ENST00000321110 CC2D1AQ6P1N0 951 aaPredicted RBP9.33□□□□□ -0.92
RTL3-201ENST00000321110 NBPF11Q86T75 865 aa9.33□□□□□ -0.92
RTL3-201ENST00000321110 EXOC4Q96A65 974 aa9.33□□□□□ -0.92
RTL3-201ENST00000321110 SPATA32Q96LK8 384 aa9.33□□□□□ -0.92
RTL3-201ENST00000321110 ACTN2P35609 894 aa9.32□□□□□ -0.92
RTL3-201ENST00000321110 ADCK5Q3MIX3 580 aa9.32□□□□□ -0.92
RTL3-201ENST00000321110 TTC31Q49AM3 519 aaPredicted RBP9.32□□□□□ -0.92
RTL3-201ENST00000321110 CT47A1Q5JQC4 288 aaPredicted RBP9.32□□□□□ -0.92
RTL3-201ENST00000321110 FOXR1Q6PIV2 292 aa9.32□□□□□ -0.92
RTL3-201ENST00000321110 AK7Q96M32 723 aa9.32□□□□□ -0.92
RTL3-201ENST00000321110 PSD3Q9NYI0 1048 aa9.32□□□□□ -0.92
RTL3-201ENST00000321110 RPGRIP1LQ68CZ1 1315 aa9.32□□□□□ -0.92
RTL3-201ENST00000321110 CPSF1Q10570 1443 aaKnown RBP9.32□□□□□ -0.92
RTL3-201ENST00000321110 PNMA6EA0A0J9YXQ4 647 aa9.32□□□□□ -0.92
RTL3-201ENST00000321110 H3BQF6 201 aa9.32□□□□□ -0.92
RTL3-201ENST00000321110 CAVIN2O95810 425 aa9.32□□□□□ -0.92
RTL3-201ENST00000321110 IFIT2P09913 472 aaKnown RBP9.32□□□□□ -0.92
RTL3-201ENST00000321110 DHX40Q8IX18 779 aaKnown RBP9.32□□□□□ -0.92
RTL3-201ENST00000321110 GOLGA6L1Q8N7Z2 621 aa9.32□□□□□ -0.92
RTL3-201ENST00000321110 PRAM1Q96QH2 718 aa9.32□□□□□ -0.92
RTL3-201ENST00000321110 SCAND2PQ9GZW5 306 aaPredicted RBP9.32□□□□□ -0.92
RTL3-201ENST00000321110 CAMSAP1Q5T5Y3 1602 aa9.31□□□□□ -0.92
RTL3-201ENST00000321110 PSDA5PKW4 1024 aaPredicted RBP9.31□□□□□ -0.92
RTL3-201ENST00000321110 F6X3S4 739 aa9.31□□□□□ -0.92
RTL3-201ENST00000321110 RAPGEF3O95398 923 aa9.31□□□□□ -0.92
RTL3-201ENST00000321110 ATP2B1P20020 1258 aa9.31□□□□□ -0.92
RTL3-201ENST00000321110 MAGEA9P43362 315 aa9.31□□□□□ -0.92
RTL3-201ENST00000321110 ARMCX5Q6P1M9 558 aa9.31□□□□□ -0.92
RTL3-201ENST00000321110 EP400NLQ6ZTU2 488 aa9.31□□□□□ -0.92
RTL3-201ENST00000321110 GPATCH11Q8N954 259 aa9.31□□□□□ -0.92
RTL3-201ENST00000321110 BICD2Q8TD16 824 aa9.31□□□□□ -0.92
RTL3-201ENST00000321110 DDX54Q8TDD1 881 aaKnown RBP9.31□□□□□ -0.92
RTL3-201ENST00000321110 CARD6Q9BX69 1037 aa9.31□□□□□ -0.92
RTL3-201ENST00000321110 OSBPL5Q9H0X9 879 aaPredicted RBP9.31□□□□□ -0.92
RTL3-201ENST00000321110 PDRG1Q9NUG6 133 aa9.31□□□□□ -0.92
RTL3-201ENST00000321110 DNAI1Q9UI46 699 aa9.31□□□□□ -0.92
RTL3-201ENST00000321110 STAG3Q9UJ98 1225 aa9.31□□□□□ -0.92
RTL3-201ENST00000321110 ZFYVE9O95405 1425 aa9.31□□□□□ -0.92
RTL3-201ENST00000321110 APPP05067 770 aa9.31□□□□□ -0.92
RTL3-201ENST00000321110 GSDMDP57764 484 aa9.31□□□□□ -0.92
RTL3-201ENST00000321110 ETF1P62495 437 aaKnown RBP9.31□□□□□ -0.92
RTL3-201ENST00000321110 CCDC158Q5M9N0 1113 aa9.31□□□□□ -0.92
RTL3-201ENST00000321110 SLC4A10Q6U841 1118 aa9.31□□□□□ -0.92
RTL3-201ENST00000321110 MNS1Q8NEH6 495 aa9.31□□□□□ -0.92
RTL3-201ENST00000321110 FUT8Q9BYC5 575 aa9.31□□□□□ -0.92
RTL3-201ENST00000321110 SH2B1Q9NRF2 756 aaPredicted RBP9.31□□□□□ -0.92
RTL3-201ENST00000321110 SPG7Q9UQ90 795 aa9.31□□□□□ -0.92
RTL3-201ENST00000321110 ANKRD26Q9UPS8 1709 aa9.31□□□□□ -0.92
RTL3-201ENST00000321110 ADCY9O60503 1353 aa9.31□□□□□ -0.92
RTL3-201ENST00000321110 ABCC3O15438 1527 aa9.3□□□□□ -0.92
RTL3-201ENST00000321110 SIGLEC1Q9BZZ2 1709 aa9.3□□□□□ -0.92
RTL3-201ENST00000321110 EVCP57679 992 aa9.3□□□□□ -0.92
RTL3-201ENST00000321110 LMOD3Q0VAK6 560 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 147.9 ms