RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 RAB3IL1Q8TBN0 382 aa19.3■□□□□ 0.68
SMCHD1-201ENST00000320876 TMPOP42166 694 aaKnown RBP19.29■□□□□ 0.68
SMCHD1-201ENST00000320876 SSX2IPQ9Y2D8 614 aa19.29■□□□□ 0.68
SMCHD1-201ENST00000320876 CCDC129Q6ZRS4 1044 aa19.29■□□□□ 0.68
SMCHD1-201ENST00000320876 ANAPC4Q9UJX5 808 aa19.29■□□□□ 0.68
SMCHD1-201ENST00000320876 EVI5LQ96CN4 794 aa19.29■□□□□ 0.68
SMCHD1-201ENST00000320876 ZSWIM4Q9H7M6 989 aa19.29■□□□□ 0.68
SMCHD1-201ENST00000320876 POLR3DP05423 398 aaPredicted RBP19.29■□□□□ 0.68
SMCHD1-201ENST00000320876 TCERG1LQ5VWI1 586 aa19.29■□□□□ 0.68
SMCHD1-201ENST00000320876 NOLC1Q14978 699 aaKnown RBP eCLIP19.28■□□□□ 0.68
SMCHD1-201ENST00000320876 CFAP70Q5T0N1 1121 aa19.28■□□□□ 0.68
SMCHD1-201ENST00000320876 MICALL1Q8N3F8 863 aa19.28■□□□□ 0.68
SMCHD1-201ENST00000320876 MYO1BO43795 1136 aa19.28■□□□□ 0.68
SMCHD1-201ENST00000320876 OTUD6BQ8N6M0 293 aa19.28■□□□□ 0.68
SMCHD1-201ENST00000320876 CCDC77Q9BR77 488 aa19.28■□□□□ 0.68
SMCHD1-201ENST00000320876 SKILP12757 684 aa19.28■□□□□ 0.68
SMCHD1-201ENST00000320876 NLRP5P59047 1200 aa19.28■□□□□ 0.68
SMCHD1-201ENST00000320876 PTPRCP08575 1304 aa19.28■□□□□ 0.68
SMCHD1-201ENST00000320876 DZIP1Q86YF9 867 aaKnown RBP19.28■□□□□ 0.68
SMCHD1-201ENST00000320876 KIF14Q15058 1648 aa19.28■□□□□ 0.68
SMCHD1-201ENST00000320876 ATP2C2O75185 946 aa19.28■□□□□ 0.68
SMCHD1-201ENST00000320876 ZNF652Q9Y2D9 606 aa19.28■□□□□ 0.68
SMCHD1-201ENST00000320876 SYCP3Q8IZU3 236 aa19.28■□□□□ 0.68
SMCHD1-201ENST00000320876 ATRIPQ8WXE1 791 aa19.27■□□□□ 0.68
SMCHD1-201ENST00000320876 HS1BP3Q53T59 392 aa19.27■□□□□ 0.68
SMCHD1-201ENST00000320876 BMP2KLQ5H9B9 411 aa19.27■□□□□ 0.68
SMCHD1-201ENST00000320876 ATP2A1O14983 1001 aa19.27■□□□□ 0.68
SMCHD1-201ENST00000320876 N4BP3O15049 544 aa19.27■□□□□ 0.68
SMCHD1-201ENST00000320876 STARD3NLO95772 234 aa19.27■□□□□ 0.68
SMCHD1-201ENST00000320876 GUCY1B3Q02153 619 aa19.27■□□□□ 0.68
SMCHD1-201ENST00000320876 HMGB2P26583 209 aaKnown RBP19.27■□□□□ 0.67
SMCHD1-201ENST00000320876 BOLA2Q9H3K6 86 aa19.27■□□□□ 0.67
SMCHD1-201ENST00000320876 SLC12A5Q9H2X9 1139 aa19.26■□□□□ 0.67
SMCHD1-201ENST00000320876 STIM2Q9P246 746 aa19.26■□□□□ 0.67
SMCHD1-201ENST00000320876 TOM1L2Q6ZVM7 507 aa19.26■□□□□ 0.67
SMCHD1-201ENST00000320876 TRIM47Q96LD4 638 aa19.26■□□□□ 0.67
SMCHD1-201ENST00000320876 ANO6Q4KMQ2 910 aa19.26■□□□□ 0.67
SMCHD1-201ENST00000320876 GBP6Q6ZN66 633 aa19.26■□□□□ 0.67
SMCHD1-201ENST00000320876 TBC1D9Q6ZT07 1266 aa19.26■□□□□ 0.67
SMCHD1-201ENST00000320876 GOLGA8AA7E2F4 631 aa19.26■□□□□ 0.67
SMCHD1-201ENST00000320876 HCLS1P14317 486 aaPredicted RBP19.26■□□□□ 0.67
SMCHD1-201ENST00000320876 ZBTB16Q05516 673 aa19.26■□□□□ 0.67
SMCHD1-201ENST00000320876 SYKP43405 635 aa19.26■□□□□ 0.67
SMCHD1-201ENST00000320876 CRACR2BQ8N4Y2 399 aaPredicted RBP19.26■□□□□ 0.67
SMCHD1-201ENST00000320876 RANBP6O60518 1105 aaKnown RBP19.26■□□□□ 0.67
SMCHD1-201ENST00000320876 TTF1Q15361 905 aaPredicted RBP19.26■□□□□ 0.67
SMCHD1-201ENST00000320876 SLF2Q8IX21 1173 aa19.26■□□□□ 0.67
SMCHD1-201ENST00000320876 DRC1Q96MC2 740 aa19.26■□□□□ 0.67
SMCHD1-201ENST00000320876 TUBBP07437 444 aa19.25■□□□□ 0.67
SMCHD1-201ENST00000320876 CABP1Q9NZU7 370 aa19.25■□□□□ 0.67
SMCHD1-201ENST00000320876 AKR1B10O60218 316 aa19.25■□□□□ 0.67
SMCHD1-201ENST00000320876 IFIT1P09914 478 aaKnown RBP19.25■□□□□ 0.67
SMCHD1-201ENST00000320876 KCNG4Q8TDN1 519 aa19.25■□□□□ 0.67
SMCHD1-201ENST00000320876 SMARCA5O60264 1052 aaPredicted RBP19.25■□□□□ 0.67
SMCHD1-201ENST00000320876 CCT2P78371 535 aaKnown RBP19.25■□□□□ 0.67
SMCHD1-201ENST00000320876 USP37Q86T82 979 aa19.25■□□□□ 0.67
SMCHD1-201ENST00000320876 IFIT3O14879 490 aaKnown RBP19.25■□□□□ 0.67
SMCHD1-201ENST00000320876 SLU7O95391 586 aaKnown RBP19.25■□□□□ 0.67
SMCHD1-201ENST00000320876 FAM200AQ8TCP9 573 aa19.25■□□□□ 0.67
SMCHD1-201ENST00000320876 MAP7D1Q3KQU3 841 aa19.24■□□□□ 0.67
SMCHD1-201ENST00000320876 NBPF11Q86T75 865 aa19.24■□□□□ 0.67
SMCHD1-201ENST00000320876 TSGA10Q9BZW7 698 aa19.24■□□□□ 0.67
SMCHD1-201ENST00000320876 PRC1O43663 620 aa19.24■□□□□ 0.67
SMCHD1-201ENST00000320876 UBA7P41226 1012 aa19.24■□□□□ 0.67
SMCHD1-201ENST00000320876 BMP15O95972 392 aa19.24■□□□□ 0.67
SMCHD1-201ENST00000320876 RARSP54136 660 aaKnown RBP19.24■□□□□ 0.67
SMCHD1-201ENST00000320876 SPTY2D1Q68D10 685 aaPredicted RBP19.24■□□□□ 0.67
SMCHD1-201ENST00000320876 RBM27Q9P2N5 1060 aaKnown RBP19.24■□□□□ 0.67
SMCHD1-201ENST00000320876 EPRSP07814 1512 aaKnown RBP19.24■□□□□ 0.67
SMCHD1-201ENST00000320876 ZFYP08048 801 aaPredicted RBP19.24■□□□□ 0.67
SMCHD1-201ENST00000320876 SAMD15Q9P1V8 674 aa19.24■□□□□ 0.67
SMCHD1-201ENST00000320876 DUSP27Q5VZP5 1158 aa19.24■□□□□ 0.67
SMCHD1-201ENST00000320876 TBC1D32Q96NH3 1257 aa19.24■□□□□ 0.67
SMCHD1-201ENST00000320876 SLC5A1P13866 664 aa19.24■□□□□ 0.67
SMCHD1-201ENST00000320876 SYNCQ9H7C4 482 aa19.24■□□□□ 0.67
SMCHD1-201ENST00000320876 DCAF8L1A6NGE4 600 aa19.23■□□□□ 0.67
SMCHD1-201ENST00000320876 CLGNO14967 610 aa19.23■□□□□ 0.67
SMCHD1-201ENST00000320876 SWAP70Q9UH65 585 aa19.23■□□□□ 0.67
SMCHD1-201ENST00000320876 KRT86O43790 486 aa19.23■□□□□ 0.67
SMCHD1-201ENST00000320876 CCDC174Q6PII3 467 aa19.23■□□□□ 0.67
SMCHD1-201ENST00000320876 KIF3CO14782 793 aa19.23■□□□□ 0.67
SMCHD1-201ENST00000320876 SYT1P21579 422 aa19.23■□□□□ 0.67
SMCHD1-201ENST00000320876 LMBR1Q8WVP7 490 aa19.23■□□□□ 0.67
SMCHD1-201ENST00000320876 ZNF444Q8N0Y2 327 aaPredicted RBP19.23■□□□□ 0.67
SMCHD1-201ENST00000320876 JAKMIP2Q96AA8 810 aa19.23■□□□□ 0.67
SMCHD1-201ENST00000320876 DNAI1Q9UI46 699 aa19.23■□□□□ 0.67
SMCHD1-201ENST00000320876 TACC1O75410 805 aa19.23■□□□□ 0.67
SMCHD1-201ENST00000320876 ANKIB1Q9P2G1 1089 aa19.23■□□□□ 0.67
SMCHD1-201ENST00000320876 ITSN2Q9NZM3 1697 aa19.23■□□□□ 0.67
SMCHD1-201ENST00000320876 ZSCAN22P10073 491 aaPredicted RBP19.23■□□□□ 0.67
SMCHD1-201ENST00000320876 METAP2P50579 478 aaKnown RBP eCLIP19.23■□□□□ 0.671e-11■■■□□ 15
SMCHD1-201ENST00000320876 B4GALNT4Q76KP1 1039 aa19.23■□□□□ 0.67
SMCHD1-201ENST00000320876 GDPD2Q9HCC8 539 aa19.23■□□□□ 0.67
SMCHD1-201ENST00000320876 VPS18Q9P253 973 aa19.23■□□□□ 0.67
SMCHD1-201ENST00000320876 KRT83P78385 493 aa19.22■□□□□ 0.67
SMCHD1-201ENST00000320876 IFIT5Q13325 482 aaKnown RBP19.22■□□□□ 0.67
SMCHD1-201ENST00000320876 CCDC114Q96M63 670 aa19.22■□□□□ 0.67
SMCHD1-201ENST00000320876 RASSF4Q9H2L5 321 aa19.22■□□□□ 0.67
SMCHD1-201ENST00000320876 CPLX4Q7Z7G2 160 aa19.22■□□□□ 0.67
SMCHD1-201ENST00000320876 ATP11AP98196 1134 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms