RNA–Protein interactions for RNA: ENST00000320672.8

SSBP2-201, Transcript of single stranded DNA binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP2, Length 8,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-201ENST00000320672 C9orf84Q5VXU9 1444 aa10.22□□□□□ -0.77
SSBP2-201ENST00000320672 LONRF3Q496Y0 759 aa10.22□□□□□ -0.77
SSBP2-201ENST00000320672 LUZP1Q86V48 1076 aa10.22□□□□□ -0.77
SSBP2-201ENST00000320672 DNAJC25Q9H1X3 360 aa10.22□□□□□ -0.77
SSBP2-201ENST00000320672 VEZTQ9HBM0 779 aa10.22□□□□□ -0.77
SSBP2-201ENST00000320672 CYP7A1P22680 504 aa10.22□□□□□ -0.77
SSBP2-201ENST00000320672 SFPQP23246 707 aaKnown RBP eCLIP10.22□□□□□ -0.77
SSBP2-201ENST00000320672 IFFO1Q0D2I5 559 aa10.22□□□□□ -0.77
SSBP2-201ENST00000320672 MAP3K12Q12852 859 aa10.22□□□□□ -0.77
SSBP2-201ENST00000320672 MAEAQ7L5Y9 396 aa10.22□□□□□ -0.77
SSBP2-201ENST00000320672 SDSP20132 328 aa10.22□□□□□ -0.77
SSBP2-201ENST00000320672 C17orf53Q8N3J3 647 aaPredicted RBP10.22□□□□□ -0.77
SSBP2-201ENST00000320672 SLC5A1P13866 664 aa10.21□□□□□ -0.77
SSBP2-201ENST00000320672 ANAPC15P60006 121 aa10.21□□□□□ -0.77
SSBP2-201ENST00000320672 CWC15Q9P013 229 aaKnown RBP10.21□□□□□ -0.77
SSBP2-201ENST00000320672 SLC4A4Q9Y6R1 1079 aa10.21□□□□□ -0.77
SSBP2-201ENST00000320672 CASKIN1Q8WXD9 1431 aa10.21□□□□□ -0.77
SSBP2-201ENST00000320672 DNM1Q05193 864 aaKnown RBP10.21□□□□□ -0.77
SSBP2-201ENST00000320672 APOBRQ0VD83 1088 aa10.21□□□□□ -0.77
SSBP2-201ENST00000320672 PHAXQ9H814 394 aaKnown RBP10.21□□□□□ -0.77
SSBP2-201ENST00000320672 hCG_1642624A0A1W2PR95 340 aa10.21□□□□□ -0.77
SSBP2-201ENST00000320672 LMBR1LQ6UX01 489 aa10.21□□□□□ -0.77
SSBP2-201ENST00000320672 U3KPZ7 1027 aaPredicted RBP10.21□□□□□ -0.77
SSBP2-201ENST00000320672 CDK13Q14004 1512 aaKnown RBP10.21□□□□□ -0.77
SSBP2-201ENST00000320672 DHX58Q96C10 678 aa10.21□□□□□ -0.77
SSBP2-201ENST00000320672 MAATS1Q7Z4T9 603 aa10.21□□□□□ -0.78
SSBP2-201ENST00000320672 OTUD7AQ8TE49 926 aaPredicted RBP10.21□□□□□ -0.78
SSBP2-201ENST00000320672 MAPK8IP1Q9UQF2 711 aa10.21□□□□□ -0.78
SSBP2-201ENST00000320672 ACEP12821 1306 aa10.21□□□□□ -0.78
SSBP2-201ENST00000320672 CDKL5O76039 1030 aa10.21□□□□□ -0.78
SSBP2-201ENST00000320672 SYCP3Q8IZU3 236 aa10.21□□□□□ -0.78
SSBP2-201ENST00000320672 TMX3Q96JJ7 454 aa10.21□□□□□ -0.78
SSBP2-201ENST00000320672 MYO6Q9UM54 1294 aa10.21□□□□□ -0.78
SSBP2-201ENST00000320672 RRAGBQ5VZM2 374 aa10.2□□□□□ -0.78
SSBP2-201ENST00000320672 Q6ZUG5 572 aa10.2□□□□□ -0.78
SSBP2-201ENST00000320672 NEK1Q96PY6 1258 aa10.2□□□□□ -0.78
SSBP2-201ENST00000320672 BAG4O95429 457 aaKnown RBP10.2□□□□□ -0.78
SSBP2-201ENST00000320672 METAP2P50579 478 aaKnown RBP eCLIP10.2□□□□□ -0.78
SSBP2-201ENST00000320672 FAM160A1Q05DH4 1040 aa10.2□□□□□ -0.78
SSBP2-201ENST00000320672 ZNF526Q8TF50 670 aaPredicted RBP10.2□□□□□ -0.78
SSBP2-201ENST00000320672 SMTNL1A8MU46 457 aa10.2□□□□□ -0.78
SSBP2-201ENST00000320672 IARSP41252 1262 aaKnown RBP10.2□□□□□ -0.78
SSBP2-201ENST00000320672 CCDC148Q8NFR7 591 aa10.2□□□□□ -0.78
SSBP2-201ENST00000320672 BICD1Q96G01 975 aa10.2□□□□□ -0.78
SSBP2-201ENST00000320672 STX6O43752 255 aa10.2□□□□□ -0.78
SSBP2-201ENST00000320672 PHACTR2O75167 634 aa10.2□□□□□ -0.78
SSBP2-201ENST00000320672 RLBP1P12271 317 aa10.2□□□□□ -0.78
SSBP2-201ENST00000320672 USP48Q86UV5 1035 aa10.2□□□□□ -0.78
SSBP2-201ENST00000320672 LIMCH1Q9UPQ0 1083 aa10.2□□□□□ -0.78
SSBP2-201ENST00000320672 RFC4P35249 363 aa10.2□□□□□ -0.78
SSBP2-201ENST00000320672 HINFPQ9BQA5 517 aa10.2□□□□□ -0.78
SSBP2-201ENST00000320672 JADE2Q9NQC1 790 aa10.2□□□□□ -0.78
SSBP2-201ENST00000320672 COMMD10Q9Y6G5 202 aa10.2□□□□□ -0.78
SSBP2-201ENST00000320672 DISP3Q9P2K9 1392 aa10.2□□□□□ -0.78
SSBP2-201ENST00000320672 FYCO1Q9BQS8 1478 aa10.2□□□□□ -0.78
SSBP2-201ENST00000320672 HARSP12081 509 aaKnown RBP10.2□□□□□ -0.78
SSBP2-201ENST00000320672 ATP2B3Q16720 1220 aa10.2□□□□□ -0.78
SSBP2-201ENST00000320672 CCDC183Q5T5S1 534 aa10.2□□□□□ -0.78
SSBP2-201ENST00000320672 ZNF408Q9H9D4 720 aa10.2□□□□□ -0.78
SSBP2-201ENST00000320672 IRX5P78411 483 aaPredicted RBP10.2□□□□□ -0.78
SSBP2-201ENST00000320672 ZSCAN23Q3MJ62 389 aa10.2□□□□□ -0.78
SSBP2-201ENST00000320672 CHAMP1Q96JM3 812 aa10.2□□□□□ -0.78
SSBP2-201ENST00000320672 KIAA1107Q9UPP5 1409 aa10.2□□□□□ -0.78
SSBP2-201ENST00000320672 CALM1P0DP23 149 aa10.19□□□□□ -0.78
SSBP2-201ENST00000320672 CALM2P0DP24 149 aa10.19□□□□□ -0.78
SSBP2-201ENST00000320672 CALM3P0DP25 149 aa10.19□□□□□ -0.78
SSBP2-201ENST00000320672 CTNNA2P26232 953 aa10.19□□□□□ -0.78
SSBP2-201ENST00000320672 KAT14Q9H8E8 782 aa10.19□□□□□ -0.78
SSBP2-201ENST00000320672 CSPG5O95196 566 aa10.19□□□□□ -0.78
SSBP2-201ENST00000320672 ANO6Q4KMQ2 910 aa10.19□□□□□ -0.78
SSBP2-201ENST00000320672 TMCO4Q5TGY1 634 aa10.19□□□□□ -0.78
SSBP2-201ENST00000320672 AOPEPQ8N6M6 819 aa10.19□□□□□ -0.78
SSBP2-201ENST00000320672 CRACR2AQ9BSW2 395 aa10.19□□□□□ -0.78
SSBP2-201ENST00000320672 ATP6V1AP38606 617 aa10.19□□□□□ -0.78
SSBP2-201ENST00000320672 CCDC186Q7Z3E2 898 aa10.19□□□□□ -0.78
SSBP2-201ENST00000320672 IQCA1Q86XH1 822 aa10.19□□□□□ -0.78
SSBP2-201ENST00000320672 CCDC12Q8WUD4 166 aaPredicted RBP10.19□□□□□ -0.78
SSBP2-201ENST00000320672 ZNF594Q96JF6 807 aaPredicted RBP10.19□□□□□ -0.78
SSBP2-201ENST00000320672 LMAN1P49257 510 aa10.19□□□□□ -0.78
SSBP2-201ENST00000320672 NMIQ13287 307 aaPredicted RBP10.19□□□□□ -0.78
SSBP2-201ENST00000320672 ANO10Q9NW15 660 aa10.19□□□□□ -0.78
SSBP2-201ENST00000320672 APBB1IPQ7Z5R6 666 aaPredicted RBP10.19□□□□□ -0.78
SSBP2-201ENST00000320672 GNG11P61952 73 aa10.18□□□□□ -0.78
SSBP2-201ENST00000320672 GBP2P32456 591 aaPredicted RBP10.18□□□□□ -0.78
SSBP2-201ENST00000320672 G2E3Q7L622 706 aa10.18□□□□□ -0.78
SSBP2-201ENST00000320672 ZSCAN30Q86W11 494 aa10.18□□□□□ -0.78
SSBP2-201ENST00000320672 PROCA1Q8NCQ7 364 aaPredicted RBP10.18□□□□□ -0.78
SSBP2-201ENST00000320672 RBM8AQ9Y5S9 174 aaKnown RBP10.18□□□□□ -0.78
SSBP2-201ENST00000320672 PTPROQ16827 1216 aa10.18□□□□□ -0.78
SSBP2-201ENST00000320672 RHPN1Q8TCX5 695 aa10.18□□□□□ -0.78
SSBP2-201ENST00000320672 MYL10Q9BUA6 226 aa10.18□□□□□ -0.78
SSBP2-201ENST00000320672 JAKMIP3Q5VZ66 844 aa10.18□□□□□ -0.78
SSBP2-201ENST00000320672 NFATC2IPQ8NCF5 419 aa10.18□□□□□ -0.78
SSBP2-201ENST00000320672 ZNF397Q8NF99 534 aaPredicted RBP10.18□□□□□ -0.78
SSBP2-201ENST00000320672 AKAP2Q9Y2D5 859 aa10.18□□□□□ -0.78
SSBP2-201ENST00000320672 ERLIN1O75477 346 aa10.18□□□□□ -0.78
SSBP2-201ENST00000320672 LMOD1P29536 600 aaPredicted RBP10.18□□□□□ -0.78
SSBP2-201ENST00000320672 CATIPQ7Z7H3 387 aa10.18□□□□□ -0.78
SSBP2-201ENST00000320672 CCDC66A2RUB6 948 aa10.18□□□□□ -0.78
SSBP2-201ENST00000320672 WASLO00401 505 aaPredicted RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms