RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 EXOC5O00471 708 aa4.3□□□□□ -1.72
SCAMP1-201ENST00000320280 U2AF1L5P0DN76 240 aaPredicted RBP4.3□□□□□ -1.72
SCAMP1-201ENST00000320280 PHKG2P15735 406 aa4.3□□□□□ -1.72
SCAMP1-201ENST00000320280 U2AF1Q01081 240 aaKnown RBP eCLIP4.3□□□□□ -1.72
SCAMP1-201ENST00000320280 FAM196AQ6ZSG2 479 aa4.3□□□□□ -1.72
SCAMP1-201ENST00000320280 ARHGEF1Q92888 912 aaKnown RBP4.3□□□□□ -1.72
SCAMP1-201ENST00000320280 C8orf37Q96NL8 207 aa4.3□□□□□ -1.72
SCAMP1-201ENST00000320280 TEX13AQ9BXU3 409 aaPredicted RBP4.3□□□□□ -1.72
SCAMP1-201ENST00000320280 KDM6AO15550 1401 aaPredicted RBP4.29□□□□□ -1.72
SCAMP1-201ENST00000320280 HEG1Q9ULI3 1381 aa4.29□□□□□ -1.72
SCAMP1-201ENST00000320280 S1PR4O95977 384 aa4.29□□□□□ -1.72
SCAMP1-201ENST00000320280 GNAI1P63096 354 aa4.29□□□□□ -1.72
SCAMP1-201ENST00000320280 PTGDRQ13258 359 aa4.29□□□□□ -1.72
SCAMP1-201ENST00000320280 DDB1Q16531 1140 aa4.29□□□□□ -1.72
SCAMP1-201ENST00000320280 SULT6B1Q6IMI4 303 aa4.29□□□□□ -1.72
SCAMP1-201ENST00000320280 LARP1Q6PKG0 1096 aaKnown RBP4.29□□□□□ -1.72
SCAMP1-201ENST00000320280 MYH16Q9H6N6 1097 aa4.29□□□□□ -1.72
SCAMP1-201ENST00000320280 NLRP2Q9NX02 1062 aa4.29□□□□□ -1.72
SCAMP1-201ENST00000320280 E9PSI1 815 aa4.29□□□□□ -1.72
SCAMP1-201ENST00000320280 PRKAR2BP31323 418 aa4.29□□□□□ -1.72
SCAMP1-201ENST00000320280 TMPOP42166 694 aaKnown RBP4.29□□□□□ -1.72
SCAMP1-201ENST00000320280 BRPF1P55201 1214 aaPredicted RBP4.29□□□□□ -1.72
SCAMP1-201ENST00000320280 CABLES1Q8TDN4 633 aa4.29□□□□□ -1.72
SCAMP1-201ENST00000320280 PDZRN3Q9UPQ7 1066 aa4.29□□□□□ -1.72
SCAMP1-201ENST00000320280 NUTM2GQ5VZR2 741 aa4.29□□□□□ -1.72
SCAMP1-201ENST00000320280 RTF1Q92541 710 aaKnown RBP4.29□□□□□ -1.72
SCAMP1-201ENST00000320280 QTRT2Q9H974 415 aaKnown RBP4.29□□□□□ -1.72
SCAMP1-201ENST00000320280 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.29□□□□□ -1.72
SCAMP1-201ENST00000320280 UBR3Q6ZT12 1888 aa4.28□□□□□ -1.72
SCAMP1-201ENST00000320280 ITGBL1O95965 494 aaPredicted RBP4.28□□□□□ -1.72
SCAMP1-201ENST00000320280 ADAMTS8Q9UP79 889 aa4.28□□□□□ -1.72
SCAMP1-201ENST00000320280 NUTM2BA6NNL0 878 aaPredicted RBP4.28□□□□□ -1.72
SCAMP1-201ENST00000320280 NUTM2EB1AL46 878 aaPredicted RBP4.28□□□□□ -1.72
SCAMP1-201ENST00000320280 ZNF853P0CG23 659 aa4.28□□□□□ -1.72
SCAMP1-201ENST00000320280 SLC27A3Q5K4L6 730 aa4.28□□□□□ -1.72
SCAMP1-201ENST00000320280 NYAP1Q6ZVC0 841 aa4.28□□□□□ -1.72
SCAMP1-201ENST00000320280 NUTM2AQ8IVF1 878 aaPredicted RBP4.28□□□□□ -1.72
SCAMP1-201ENST00000320280 TRMT2AQ8IZ69 625 aaKnown RBP4.28□□□□□ -1.72
SCAMP1-201ENST00000320280 C4BP0C0L5 1744 aa4.28□□□□□ -1.72
SCAMP1-201ENST00000320280 U2SURPO15042 1029 aaKnown RBP4.28□□□□□ -1.72
SCAMP1-201ENST00000320280 RNMTO43148 476 aaKnown RBP4.28□□□□□ -1.72
SCAMP1-201ENST00000320280 ADAMTS2O95450 1211 aa4.28□□□□□ -1.72
SCAMP1-201ENST00000320280 DNAJB2P25686 324 aa4.28□□□□□ -1.72
SCAMP1-201ENST00000320280 CHRNA2Q15822 529 aa4.28□□□□□ -1.72
SCAMP1-201ENST00000320280 ZNF530Q6P9A1 599 aaPredicted RBP4.28□□□□□ -1.72
SCAMP1-201ENST00000320280 KAT6BQ8WYB5 2073 aa4.27□□□□□ -1.73
SCAMP1-201ENST00000320280 ZPR1O75312 459 aa4.27□□□□□ -1.73
SCAMP1-201ENST00000320280 SLC52A2Q9HAB3 445 aa4.27□□□□□ -1.73
SCAMP1-201ENST00000320280 PLSCR1O15162 318 aa4.27□□□□□ -1.73
SCAMP1-201ENST00000320280 AAMPQ13685 434 aa4.27□□□□□ -1.73
SCAMP1-201ENST00000320280 TRAF7Q6Q0C0 670 aa4.27□□□□□ -1.73
SCAMP1-201ENST00000320280 KRT27Q7Z3Y8 459 aa4.27□□□□□ -1.73
SCAMP1-201ENST00000320280 C4AP0C0L4 1744 aa4.27□□□□□ -1.73
SCAMP1-201ENST00000320280 TUBGCP6Q96RT7 1819 aa4.27□□□□□ -1.73
SCAMP1-201ENST00000320280 CASZ1Q86V15 1759 aa4.27□□□□□ -1.73
SCAMP1-201ENST00000320280 ARFGEF2Q9Y6D5 1785 aa4.27□□□□□ -1.73
SCAMP1-201ENST00000320280 RIC1Q4ADV7 1423 aa4.27□□□□□ -1.73
SCAMP1-201ENST00000320280 ATP10DQ9P241 1426 aa4.27□□□□□ -1.73
SCAMP1-201ENST00000320280 NRXN2Q9P2S2 1712 aa4.27□□□□□ -1.73
SCAMP1-201ENST00000320280 PPM1GO15355 546 aaPredicted RBP4.27□□□□□ -1.73
SCAMP1-201ENST00000320280 SLC10A3P09131 477 aa4.27□□□□□ -1.73
SCAMP1-201ENST00000320280 GGCXP38435 758 aa4.27□□□□□ -1.73
SCAMP1-201ENST00000320280 TAF7Q15545 349 aaPredicted RBP4.27□□□□□ -1.73
SCAMP1-201ENST00000320280 MTHFSDQ2M296 383 aaKnown RBP4.27□□□□□ -1.73
SCAMP1-201ENST00000320280 ALDH1L2Q3SY69 923 aa4.27□□□□□ -1.73
SCAMP1-201ENST00000320280 RNF223E7ERA6 249 aa4.26□□□□□ -1.73
SCAMP1-201ENST00000320280 CHL1O00533 1208 aa4.26□□□□□ -1.73
SCAMP1-201ENST00000320280 RC3H1Q5TC82 1133 aaKnown RBP4.26□□□□□ -1.73
SCAMP1-201ENST00000320280 STRN4Q9NRL3 753 aa4.26□□□□□ -1.73
SCAMP1-201ENST00000320280 CNTNAP4Q9C0A0 1308 aa4.26□□□□□ -1.73
SCAMP1-201ENST00000320280 KIF13BQ9NQT8 1826 aa4.26□□□□□ -1.73
SCAMP1-201ENST00000320280 MS4A1P11836 297 aa4.26□□□□□ -1.73
SCAMP1-201ENST00000320280 TNNT2P45379 298 aaPredicted RBP4.26□□□□□ -1.73
SCAMP1-201ENST00000320280 FUT2Q10981 343 aa4.26□□□□□ -1.73
SCAMP1-201ENST00000320280 KMT5BQ4FZB7 885 aa4.26□□□□□ -1.73
SCAMP1-201ENST00000320280 WWC1Q8IX03 1113 aa4.26□□□□□ -1.73
SCAMP1-201ENST00000320280 SEPT12Q8IYM1 358 aa4.26□□□□□ -1.73
SCAMP1-201ENST00000320280 RNF123Q5XPI4 1314 aa4.26□□□□□ -1.73
SCAMP1-201ENST00000320280 LRP5O75197 1615 aa4.26□□□□□ -1.73
SCAMP1-201ENST00000320280 RIPK4P57078 832 aa4.26□□□□□ -1.73
SCAMP1-201ENST00000320280 KRI1Q8N9T8 703 aaKnown RBP4.26□□□□□ -1.73
SCAMP1-201ENST00000320280 FLAD1Q8NFF5 587 aa4.26□□□□□ -1.73
SCAMP1-201ENST00000320280 ADGRG1Q9Y653 693 aa4.26□□□□□ -1.73
SCAMP1-201ENST00000320280 CYP27B1O15528 508 aa4.25□□□□□ -1.73
SCAMP1-201ENST00000320280 TEFQ10587 303 aa4.25□□□□□ -1.73
SCAMP1-201ENST00000320280 RGS17Q9UGC6 210 aaPredicted RBP4.25□□□□□ -1.73
SCAMP1-201ENST00000320280 DLEC1Q9Y238 1755 aa4.25□□□□□ -1.73
SCAMP1-201ENST00000320280 A0A087WZG4 1122 aa4.25□□□□□ -1.73
SCAMP1-201ENST00000320280 FAM187AA6NFU0 413 aa4.25□□□□□ -1.73
SCAMP1-201ENST00000320280 FMNL2Q96PY5 1086 aa4.25□□□□□ -1.73
SCAMP1-201ENST00000320280 CHMP4BQ9H444 224 aaKnown RBP4.25□□□□□ -1.73
SCAMP1-201ENST00000320280 TMOD3Q9NYL9 352 aa4.25□□□□□ -1.73
SCAMP1-201ENST00000320280 SLFN5Q08AF3 891 aa4.25□□□□□ -1.73
SCAMP1-201ENST00000320280 AEBP1Q8IUX7 1158 aa4.25□□□□□ -1.73
SCAMP1-201ENST00000320280 GPIHBP1Q8IV16 184 aa4.25□□□□□ -1.73
SCAMP1-201ENST00000320280 CCDC24Q8N4L8 307 aa4.25□□□□□ -1.73
SCAMP1-201ENST00000320280 TMEM134Q9H6X4 195 aa4.25□□□□□ -1.73
SCAMP1-201ENST00000320280 COL15A1P39059 1388 aa4.24□□□□□ -1.73
SCAMP1-201ENST00000320280 AFDNP55196 1824 aaKnown RBP4.24□□□□□ -1.73
SCAMP1-201ENST00000320280 CABP4P57796 275 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms