RNA–Protein interactions for RNA: ENST00000319223.8

LRRC42-201, Transcript of leucine rich repeat containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC42, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-201ENST00000319223 IBTKQ9P2D0 1353 aaPredicted RBP21.27■■□□□ 1
LRRC42-201ENST00000319223 H0YIN7 160 aa21.26■□□□□ 0.99
LRRC42-201ENST00000319223 METTL22Q9BUU2 404 aaPredicted RBP21.26■□□□□ 0.99
LRRC42-201ENST00000319223 PIM2Q9P1W9 311 aa21.26■□□□□ 0.99
LRRC42-201ENST00000319223 COL11A2P13942 1736 aaPredicted RBP21.26■□□□□ 0.99
LRRC42-201ENST00000319223 UTRNP46939 3433 aa21.25■□□□□ 0.99
LRRC42-201ENST00000319223 TNRC6CQ9HCJ0 1690 aaKnown RBP21.25■□□□□ 0.99
LRRC42-201ENST00000319223 FKBP5Q13451 457 aaPredicted RBP21.25■□□□□ 0.99
LRRC42-201ENST00000319223 SSH1Q8WYL5 1049 aa21.25■□□□□ 0.99
LRRC42-201ENST00000319223 ZBED9Q6R2W3 1325 aa21.24■□□□□ 0.99
LRRC42-201ENST00000319223 CACNA1FO60840 1977 aa21.24■□□□□ 0.99
LRRC42-201ENST00000319223 KLRG2A4D1S0 409 aaPredicted RBP21.24■□□□□ 0.99
LRRC42-201ENST00000319223 SRGNP10124 158 aa21.24■□□□□ 0.99
LRRC42-201ENST00000319223 TRIM28Q13263 835 aaKnown RBP21.24■□□□□ 0.99
LRRC42-201ENST00000319223 C3orf67Q6ZVT6 689 aa21.24■□□□□ 0.99
LRRC42-201ENST00000319223 MRPL50Q8N5N7 158 aaKnown RBP21.24■□□□□ 0.99
LRRC42-201ENST00000319223 ZNF622Q969S3 477 aaKnown RBP eCLIP21.24■□□□□ 0.99
LRRC42-201ENST00000319223 BCL2L13Q9BXK5 485 aa21.24■□□□□ 0.99
LRRC42-201ENST00000319223 TRMT112Q9UI30 125 aaKnown RBP21.24■□□□□ 0.99
LRRC42-201ENST00000319223 DLEC1Q9Y238 1755 aa21.24■□□□□ 0.99
LRRC42-201ENST00000319223 IGKV5-2P06315 115 aa21.24■□□□□ 0.99
LRRC42-201ENST00000319223 F6X3S4 739 aa21.23■□□□□ 0.99
LRRC42-201ENST00000319223 FAM89AQ96GI7 184 aa21.23■□□□□ 0.99
LRRC42-201ENST00000319223 DALRD3Q5D0E6 543 aaKnown RBP21.22■□□□□ 0.99
LRRC42-201ENST00000319223 RTL5Q5HYW3 569 aaPredicted RBP21.22■□□□□ 0.99
LRRC42-201ENST00000319223 SLC10A5Q5PT55 438 aa21.22■□□□□ 0.99
LRRC42-201ENST00000319223 HCLS1P14317 486 aaPredicted RBP21.21■□□□□ 0.99
LRRC42-201ENST00000319223 JARID2Q92833 1246 aaPredicted RBP21.21■□□□□ 0.99
LRRC42-201ENST00000319223 PDZRN3Q9UPQ7 1066 aa21.21■□□□□ 0.99
LRRC42-201ENST00000319223 CWF19L2Q2TBE0 894 aaKnown RBP21.21■□□□□ 0.99
LRRC42-201ENST00000319223 TTLL6Q8N841 843 aa21.21■□□□□ 0.99
LRRC42-201ENST00000319223 DNAAF4Q8WXU2 420 aa21.21■□□□□ 0.99
LRRC42-201ENST00000319223 SH3TC1Q8TE82 1336 aa21.2■□□□□ 0.98
LRRC42-201ENST00000319223 GRIN3BO60391 1043 aa21.2■□□□□ 0.98
LRRC42-201ENST00000319223 CRY2Q49AN0 593 aa21.2■□□□□ 0.98
LRRC42-201ENST00000319223 CCDC191Q8NCU4 936 aa21.2■□□□□ 0.98
LRRC42-201ENST00000319223 MASTLQ96GX5 879 aa21.2■□□□□ 0.98
LRRC42-201ENST00000319223 STYK1Q6J9G0 422 aa21.19■□□□□ 0.98
LRRC42-201ENST00000319223 RIC1Q4ADV7 1423 aa21.19■□□□□ 0.98
LRRC42-201ENST00000319223 RNF123Q5XPI4 1314 aa21.19■□□□□ 0.98
LRRC42-201ENST00000319223 ALDH1L2Q3SY69 923 aa21.18■□□□□ 0.98
LRRC42-201ENST00000319223 CWC25Q9NXE8 425 aaPredicted RBP21.18■□□□□ 0.98
LRRC42-201ENST00000319223 NEURL1BA8MQ27 555 aa21.18■□□□□ 0.98
LRRC42-201ENST00000319223 CT47B1P0C2W7 299 aaPredicted RBP21.18■□□□□ 0.98
LRRC42-201ENST00000319223 NPR1P16066 1061 aa21.18■□□□□ 0.98
LRRC42-201ENST00000319223 NEXNQ0ZGT2 675 aa21.17■□□□□ 0.98
LRRC42-201ENST00000319223 ZBTB38Q8NAP3 1195 aaPredicted RBP21.17■□□□□ 0.98
LRRC42-201ENST00000319223 NLRP3Q96P20 1036 aa21.17■□□□□ 0.98
LRRC42-201ENST00000319223 SMC4Q9NTJ3 1288 aa21.17■□□□□ 0.98
LRRC42-201ENST00000319223 ZNF219Q9P2Y4 722 aaPredicted RBP21.17■□□□□ 0.98
LRRC42-201ENST00000319223 RARSP54136 660 aaKnown RBP21.16■□□□□ 0.98
LRRC42-201ENST00000319223 CNKSR1Q969H4 720 aa21.16■□□□□ 0.98
LRRC42-201ENST00000319223 SLX4Q8IY92 1834 aa21.16■□□□□ 0.98
LRRC42-201ENST00000319223 ARFGEF1Q9Y6D6 1849 aa21.16■□□□□ 0.98
LRRC42-201ENST00000319223 IRS4O14654 1257 aaPredicted RBP21.15■□□□□ 0.98
LRRC42-201ENST00000319223 PRPF40BQ6NWY9 871 aaKnown RBP21.15■□□□□ 0.98
LRRC42-201ENST00000319223 ARHGAP27Q6ZUM4 889 aa21.15■□□□□ 0.98
LRRC42-201ENST00000319223 DDX60Q8IY21 1712 aaKnown RBP21.15■□□□□ 0.98
LRRC42-201ENST00000319223 LAMB2P55268 1798 aa21.15■□□□□ 0.98
LRRC42-201ENST00000319223 PCCAP05165 728 aaPredicted RBP21.15■□□□□ 0.98
LRRC42-201ENST00000319223 BEND3Q5T5X7 828 aa21.15■□□□□ 0.98
LRRC42-201ENST00000319223 CACNA1SQ13698 1873 aa21.14■□□□□ 0.98
LRRC42-201ENST00000319223 C21orf2O43822 256 aa21.14■□□□□ 0.97
LRRC42-201ENST00000319223 HOXA10P31260 410 aaPredicted RBP21.14■□□□□ 0.97
LRRC42-201ENST00000319223 LINS1Q8NG48 757 aa21.14■□□□□ 0.97
LRRC42-201ENST00000319223 GCKRQ14397 625 aa21.13■□□□□ 0.97
LRRC42-201ENST00000319223 SLC51AQ86UW1 340 aa21.13■□□□□ 0.97
LRRC42-201ENST00000319223 RPGRQ92834 1020 aaKnown RBP21.13■□□□□ 0.97
LRRC42-201ENST00000319223 SLC4A10Q6U841 1118 aa21.12■□□□□ 0.97
LRRC42-201ENST00000319223 OLFM4Q6UX06 510 aa21.12■□□□□ 0.97
LRRC42-201ENST00000319223 C7orf43Q8WVR3 580 aa21.12■□□□□ 0.97
LRRC42-201ENST00000319223 H7C1W4 665 aa21.12■□□□□ 0.97
LRRC42-201ENST00000319223 NOB1Q9ULX3 412 aaKnown RBP21.12■□□□□ 0.97
LRRC42-201ENST00000319223 PTPRCP08575 1304 aa21.12■□□□□ 0.97
LRRC42-201ENST00000319223 BCAR3O75815 825 aa21.11■□□□□ 0.97
LRRC42-201ENST00000319223 ALDH1B1P30837 517 aa21.1■□□□□ 0.97
LRRC42-201ENST00000319223 BRPF1P55201 1214 aaPredicted RBP21.1■□□□□ 0.97
LRRC42-201ENST00000319223 UBE3BQ7Z3V4 1068 aa21.1■□□□□ 0.97
LRRC42-201ENST00000319223 RBM17Q96I25 401 aaKnown RBP21.1■□□□□ 0.97
LRRC42-201ENST00000319223 CRAMP1Q96RY5 1269 aa21.1■□□□□ 0.97
LRRC42-201ENST00000319223 CASP7P55210 303 aa21.09■□□□□ 0.97
LRRC42-201ENST00000319223 SF3B3Q15393 1217 aaKnown RBP21.09■□□□□ 0.97
LRRC42-201ENST00000319223 CHD4Q14839 1912 aa21.09■□□□□ 0.97
LRRC42-201ENST00000319223 ABCC4O15439 1325 aa21.09■□□□□ 0.97
LRRC42-201ENST00000319223 CDHR2Q9BYE9 1310 aa21.09■□□□□ 0.97
LRRC42-201ENST00000319223 RASSF7Q02833 373 aa21.09■□□□□ 0.97
LRRC42-201ENST00000319223 TAF1P21675 1872 aa21.08■□□□□ 0.97
LRRC42-201ENST00000319223 COL4A1P02462 1669 aa21.08■□□□□ 0.97
LRRC42-201ENST00000319223 PDE8AO60658 829 aa21.08■□□□□ 0.97
LRRC42-201ENST00000319223 PRELPP51888 382 aa21.08■□□□□ 0.97
LRRC42-201ENST00000319223 NFKBIEO00221 500 aa21.07■□□□□ 0.96
LRRC42-201ENST00000319223 YY1P25490 414 aa21.07■□□□□ 0.96
LRRC42-201ENST00000319223 CCDC85AQ96PX6 553 aaPredicted RBP21.07■□□□□ 0.96
LRRC42-201ENST00000319223 SRCIN1Q9C0H9 1055 aa21.07■□□□□ 0.96
LRRC42-201ENST00000319223 DDX46Q7L014 1031 aaKnown RBP21.06■□□□□ 0.96
LRRC42-201ENST00000319223 YTHDC1Q96MU7 727 aaKnown RBP21.06■□□□□ 0.96
LRRC42-201ENST00000319223 ALDH1L1O75891 902 aa21.05■□□□□ 0.96
LRRC42-201ENST00000319223 SEC31BQ9NQW1 1179 aa21.05■□□□□ 0.96
LRRC42-201ENST00000319223 TNNQ9UQP3 1299 aa21.05■□□□□ 0.96
LRRC42-201ENST00000319223 PPEF1O14829 653 aaPredicted RBP21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms