RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 SLFNL1Q499Z3 407 aa16.8■□□□□ 0.28
PABPC1-201ENST00000318607 CCDC129Q6ZRS4 1044 aa16.8■□□□□ 0.28
PABPC1-201ENST00000318607 MRVI1Q9Y6F6 885 aa16.8■□□□□ 0.28
PABPC1-201ENST00000318607 BLOC1S2Q6QNY1 142 aa16.8■□□□□ 0.28
PABPC1-201ENST00000318607 RPAP1Q9BWH6 1393 aaPredicted RBP16.8■□□□□ 0.28
PABPC1-201ENST00000318607 LETM1O95202 739 aaPredicted RBP16.79■□□□□ 0.28
PABPC1-201ENST00000318607 ME1P48163 572 aa16.79■□□□□ 0.28
PABPC1-201ENST00000318607 PTPN14Q15678 1187 aa16.79■□□□□ 0.28
PABPC1-201ENST00000318607 HYPKQ9NX55 129 aa16.79■□□□□ 0.28
PABPC1-201ENST00000318607 ZSCAN25Q6NSZ9 544 aa16.79■□□□□ 0.28
PABPC1-201ENST00000318607 EYA1Q99502 592 aa16.79■□□□□ 0.28
PABPC1-201ENST00000318607 ACEP12821 1306 aa16.78■□□□□ 0.28
PABPC1-201ENST00000318607 NRXN3Q9Y4C0 1643 aa16.78■□□□□ 0.28
PABPC1-201ENST00000318607 OTUD7BQ6GQQ9 843 aa16.78■□□□□ 0.28
PABPC1-201ENST00000318607 MPRIPQ6WCQ1 1025 aa16.78■□□□□ 0.28
PABPC1-201ENST00000318607 BRD2P25440 801 aaKnown RBP16.78■□□□□ 0.28
PABPC1-201ENST00000318607 ANAPC15P60006 121 aa16.78■□□□□ 0.28
PABPC1-201ENST00000318607 ZSWIM4Q9H7M6 989 aa16.78■□□□□ 0.28
PABPC1-201ENST00000318607 DIP2AQ14689 1571 aa16.78■□□□□ 0.28
PABPC1-201ENST00000318607 MYL6BP14649 208 aa16.78■□□□□ 0.28
PABPC1-201ENST00000318607 GTF2F1P35269 517 aaKnown RBP eCLIP16.78■□□□□ 0.28
PABPC1-201ENST00000318607 NMIQ13287 307 aaPredicted RBP16.78■□□□□ 0.28
PABPC1-201ENST00000318607 SF3A1Q15459 793 aaKnown RBP16.78■□□□□ 0.28
PABPC1-201ENST00000318607 KIF1BPQ96EK5 621 aa16.78■□□□□ 0.28
PABPC1-201ENST00000318607 RAD50Q92878 1312 aa16.77■□□□□ 0.28
PABPC1-201ENST00000318607 LSG1Q9H089 658 aaKnown RBP16.77■□□□□ 0.28
PABPC1-201ENST00000318607 RUFY2Q8WXA3 655 aa16.77■□□□□ 0.27
PABPC1-201ENST00000318607 ZNF330Q9Y3S2 320 aaPredicted RBP16.77■□□□□ 0.27
PABPC1-201ENST00000318607 GOLGA8FQ08AF8 430 aa16.76■□□□□ 0.27
PABPC1-201ENST00000318607 GOLGA8DPQ0D2H9 430 aa16.76■□□□□ 0.27
PABPC1-201ENST00000318607 BRF1Q92994 677 aa16.76■□□□□ 0.27
PABPC1-201ENST00000318607 QRICH2Q9H0J4 1663 aa16.76■□□□□ 0.27
PABPC1-201ENST00000318607 EPC1Q9H2F5 836 aa16.76■□□□□ 0.27
PABPC1-201ENST00000318607 NCOA5Q9HCD5 579 aaKnown RBP16.76■□□□□ 0.27
PABPC1-201ENST00000318607 TLR7Q9NYK1 1049 aaKnown RBP16.76■□□□□ 0.27
PABPC1-201ENST00000318607 MED14O60244 1454 aa16.76■□□□□ 0.27
PABPC1-201ENST00000318607 CREBRFQ8IUR6 639 aa16.75■□□□□ 0.27
PABPC1-201ENST00000318607 SEC62Q99442 399 aaKnown RBP16.75■□□□□ 0.27
PABPC1-201ENST00000318607 POLR3DP05423 398 aaPredicted RBP16.75■□□□□ 0.27
PABPC1-201ENST00000318607 CREB3L3Q68CJ9 461 aa16.75■□□□□ 0.27
PABPC1-201ENST00000318607 LGR6Q9HBX8 967 aa16.75■□□□□ 0.27
PABPC1-201ENST00000318607 ZNF75DP51815 510 aa16.75■□□□□ 0.27
PABPC1-201ENST00000318607 ERCC6LQ2NKX8 1250 aa16.75■□□□□ 0.27
PABPC1-201ENST00000318607 C11orf57Q6ZUT1 292 aaPredicted RBP16.75■□□□□ 0.27
PABPC1-201ENST00000318607 PRAMEF22A3QJZ6 481 aa16.74■□□□□ 0.27
PABPC1-201ENST00000318607 G3BP1Q13283 466 aaKnown RBP eCLIP16.74■□□□□ 0.273e-11■■■□□ 17.3
PABPC1-201ENST00000318607 CERS3Q8IU89 383 aa16.74■□□□□ 0.27
PABPC1-201ENST00000318607 AOPEPQ8N6M6 819 aa16.74■□□□□ 0.27
PABPC1-201ENST00000318607 PUS7Q96PZ0 661 aaKnown RBP16.74■□□□□ 0.27
PABPC1-201ENST00000318607 RGS12O14924 1447 aa16.74■□□□□ 0.27
PABPC1-201ENST00000318607 CCDC69A6NI79 296 aa16.74■□□□□ 0.27
PABPC1-201ENST00000318607 GTPBP4Q9BZE4 634 aaKnown RBP16.74■□□□□ 0.27
PABPC1-201ENST00000318607 OSBPL3Q9H4L5 887 aa16.74■□□□□ 0.27
PABPC1-201ENST00000318607 TTLL5Q6EMB2 1281 aa16.73■□□□□ 0.27
PABPC1-201ENST00000318607 NEUROD6Q96NK8 337 aa16.73■□□□□ 0.27
PABPC1-201ENST00000318607 PNPLA6Q8IY17 1366 aa16.73■□□□□ 0.27
PABPC1-201ENST00000318607 PIK3R4Q99570 1358 aa16.73■□□□□ 0.27
PABPC1-201ENST00000318607 GNAT3A8MTJ3 354 aa16.73■□□□□ 0.27
PABPC1-201ENST00000318607 SYT10Q6XYQ8 523 aa16.73■□□□□ 0.27
PABPC1-201ENST00000318607 PI4K2BQ8TCG2 481 aa16.73■□□□□ 0.27
PABPC1-201ENST00000318607 NWD1Q149M9 1564 aa16.73■□□□□ 0.27
PABPC1-201ENST00000318607 A0A0D9SFI3 127 aa16.73■□□□□ 0.27
PABPC1-201ENST00000318607 LEO1Q8WVC0 666 aaPredicted RBP16.73■□□□□ 0.27
PABPC1-201ENST00000318607 IL17REQ8NFR9 667 aa16.72■□□□□ 0.27
PABPC1-201ENST00000318607 GPATCH3Q96I76 525 aa16.72■□□□□ 0.27
PABPC1-201ENST00000318607 DNAJC5Q9H3Z4 198 aa16.72■□□□□ 0.27
PABPC1-201ENST00000318607 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.72■□□□□ 0.27
PABPC1-201ENST00000318607 ZFYVE9O95405 1425 aa16.72■□□□□ 0.27
PABPC1-201ENST00000318607 GLRX3O76003 335 aaKnown RBP16.72■□□□□ 0.27
PABPC1-201ENST00000318607 CCDC73Q6ZRK6 1079 aa16.72■□□□□ 0.27
PABPC1-201ENST00000318607 CCAR1Q8IX12 1150 aaKnown RBP16.72■□□□□ 0.27
PABPC1-201ENST00000318607 CCDC85AQ96PX6 553 aaPredicted RBP16.72■□□□□ 0.27
PABPC1-201ENST00000318607 TTC21BQ7Z4L5 1316 aa16.72■□□□□ 0.27
PABPC1-201ENST00000318607 KINO60870 393 aaKnown RBP16.72■□□□□ 0.27
PABPC1-201ENST00000318607 DDX46Q7L014 1031 aaKnown RBP16.72■□□□□ 0.27
PABPC1-201ENST00000318607 ECHDC1Q9NTX5 307 aa16.72■□□□□ 0.27
PABPC1-201ENST00000318607 SPTLC3Q9NUV7 552 aa16.72■□□□□ 0.27
PABPC1-201ENST00000318607 TMC6Q7Z403 805 aa16.71■□□□□ 0.27
PABPC1-201ENST00000318607 TTC14Q96N46 770 aa16.71■□□□□ 0.27
PABPC1-201ENST00000318607 A0A1B0GVL5 298 aa16.71■□□□□ 0.27
PABPC1-201ENST00000318607 MAP3K2Q9Y2U5 619 aa16.71■□□□□ 0.27
PABPC1-201ENST00000318607 COL3A1P02461 1466 aaPredicted RBP16.71■□□□□ 0.27
PABPC1-201ENST00000318607 PDILTQ8N807 584 aa16.71■□□□□ 0.26
PABPC1-201ENST00000318607 ABTB2Q8N961 1025 aa16.71■□□□□ 0.26
PABPC1-201ENST00000318607 DNAAF4Q8WXU2 420 aa16.71■□□□□ 0.26
PABPC1-201ENST00000318607 GJB4Q9NTQ9 266 aa16.71■□□□□ 0.26
PABPC1-201ENST00000318607 ADGRB2O60241 1585 aa16.7■□□□□ 0.26
PABPC1-201ENST00000318607 LMOD1P29536 600 aaPredicted RBP16.7■□□□□ 0.26
PABPC1-201ENST00000318607 HSP90AB3PQ58FF7 597 aa16.7■□□□□ 0.26
PABPC1-201ENST00000318607 ZNF589Q86UQ0 364 aaPredicted RBP16.7■□□□□ 0.26
PABPC1-201ENST00000318607 LRRN4CLQ8ND94 238 aa16.7■□□□□ 0.26
PABPC1-201ENST00000318607 CCDC34Q96HJ3 373 aa16.7■□□□□ 0.26
PABPC1-201ENST00000318607 OGFRQ9NZT2 677 aa16.7■□□□□ 0.26
PABPC1-201ENST00000318607 USP32Q8NFA0 1604 aa16.7■□□□□ 0.26
PABPC1-201ENST00000318607 YEATS2Q9ULM3 1422 aa16.7■□□□□ 0.26
PABPC1-201ENST00000318607 ATP2B1P20020 1258 aa16.7■□□□□ 0.26
PABPC1-201ENST00000318607 ST3GAL1Q11201 340 aa16.7■□□□□ 0.26
PABPC1-201ENST00000318607 KMT5BQ4FZB7 885 aa16.7■□□□□ 0.26
PABPC1-201ENST00000318607 HOMEZQ8IX15 550 aa16.7■□□□□ 0.26
PABPC1-201ENST00000318607 PGBD1Q96JS3 809 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms