RNA–Protein interactions for RNA: ENST00000317243.9

ZNF554-201, Transcript of zinc finger protein 554, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF554, Length 2,736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-201ENST00000317243 RASEFQ8IZ41 740 aa23.27■■□□□ 1.32
ZNF554-201ENST00000317243 GRM8O00222 908 aa23.26■■□□□ 1.31
ZNF554-201ENST00000317243 PIBF1Q8WXW3 757 aa23.26■■□□□ 1.31
ZNF554-201ENST00000317243 MYD88Q99836 296 aa23.26■■□□□ 1.31
ZNF554-201ENST00000317243 CAMTA1Q9Y6Y1 1673 aa23.26■■□□□ 1.31
ZNF554-201ENST00000317243 SPDYE4A6NLX3 237 aa23.26■■□□□ 1.31
ZNF554-201ENST00000317243 GADD45BO75293 160 aaPredicted RBP23.26■■□□□ 1.31
ZNF554-201ENST00000317243 SASH1O94885 1247 aa23.26■■□□□ 1.31
ZNF554-201ENST00000317243 COL9A3Q14050 684 aaPredicted RBP23.26■■□□□ 1.31
ZNF554-201ENST00000317243 HYPKQ9NX55 129 aa23.25■■□□□ 1.31
ZNF554-201ENST00000317243 ATP5J2-PTCD1G3V325 749 aa23.25■■□□□ 1.31
ZNF554-201ENST00000317243 PTCD1O75127 700 aaKnown RBP23.25■■□□□ 1.31
ZNF554-201ENST00000317243 HMGN5P82970 282 aaKnown RBP23.25■■□□□ 1.31
ZNF554-201ENST00000317243 USP25Q9UHP3 1055 aa23.25■■□□□ 1.31
ZNF554-201ENST00000317243 AACSQ86V21 672 aa23.24■■□□□ 1.31
ZNF554-201ENST00000317243 MCM2P49736 904 aa23.24■■□□□ 1.31
ZNF554-201ENST00000317243 KIF3AQ9Y496 699 aa23.24■■□□□ 1.31
ZNF554-201ENST00000317243 NDUFB9Q9Y6M9 179 aa23.24■■□□□ 1.31
ZNF554-201ENST00000317243 LINS1Q8NG48 757 aa23.24■■□□□ 1.31
ZNF554-201ENST00000317243 EAF2Q96CJ1 260 aaPredicted RBP23.24■■□□□ 1.31
ZNF554-201ENST00000317243 GTPBP4Q9BZE4 634 aaKnown RBP23.24■■□□□ 1.31
ZNF554-201ENST00000317243 SGSM2O43147 1006 aa23.23■■□□□ 1.31
ZNF554-201ENST00000317243 GTF2F1P35269 517 aaKnown RBP eCLIP23.23■■□□□ 1.31
ZNF554-201ENST00000317243 PTH1RQ03431 593 aa23.23■■□□□ 1.31
ZNF554-201ENST00000317243 ALDH1L1O75891 902 aa23.22■■□□□ 1.31
ZNF554-201ENST00000317243 CLASRPQ8N2M8 674 aaKnown RBP23.22■■□□□ 1.31
ZNF554-201ENST00000317243 EDC3Q96F86 508 aaKnown RBP23.22■■□□□ 1.31
ZNF554-201ENST00000317243 KIF1AQ12756 1690 aa23.22■■□□□ 1.31
ZNF554-201ENST00000317243 IGSF3O75054 1194 aa23.22■■□□□ 1.31
ZNF554-201ENST00000317243 CUL4AQ13619 759 aa23.22■■□□□ 1.31
ZNF554-201ENST00000317243 BCL2L12Q9HB09 334 aa23.22■■□□□ 1.31
ZNF554-201ENST00000317243 CHGBP05060 677 aa23.21■■□□□ 1.31
ZNF554-201ENST00000317243 MTX1Q13505 466 aa23.21■■□□□ 1.31
ZNF554-201ENST00000317243 IFNL2Q8IZJ0 200 aa23.21■■□□□ 1.31
ZNF554-201ENST00000317243 LSG1Q9H089 658 aaKnown RBP23.21■■□□□ 1.31
ZNF554-201ENST00000317243 COL18A1P39060 1754 aa23.21■■□□□ 1.31
ZNF554-201ENST00000317243 NEURL1BA8MQ27 555 aa23.21■■□□□ 1.31
ZNF554-201ENST00000317243 SYAP1Q96A49 352 aaPredicted RBP23.21■■□□□ 1.31
ZNF554-201ENST00000317243 CCDC9Q9Y3X0 531 aaKnown RBP23.21■■□□□ 1.31
ZNF554-201ENST00000317243 SCN11AQ9UI33 1791 aa23.21■■□□□ 1.31
ZNF554-201ENST00000317243 HSPA4P34932 840 aa23.2■■□□□ 1.3
ZNF554-201ENST00000317243 USP48Q86UV5 1035 aa23.2■■□□□ 1.3
ZNF554-201ENST00000317243 CNTROBQ8N137 903 aa23.2■■□□□ 1.3
ZNF554-201ENST00000317243 SNX14Q9Y5W7 946 aa23.2■■□□□ 1.3
ZNF554-201ENST00000317243 IFIT2P09913 472 aaKnown RBP23.2■■□□□ 1.3
ZNF554-201ENST00000317243 AOX1Q06278 1338 aa23.2■■□□□ 1.3
ZNF554-201ENST00000317243 LRP10Q7Z4F1 713 aa23.19■■□□□ 1.3
ZNF554-201ENST00000317243 FAM227BQ96M60 508 aa23.19■■□□□ 1.3
ZNF554-201ENST00000317243 TCHHQ07283 1943 aa23.19■■□□□ 1.3
ZNF554-201ENST00000317243 KIF20AO95235 890 aa23.18■■□□□ 1.3
ZNF554-201ENST00000317243 ADCY5O95622 1261 aa23.18■■□□□ 1.3
ZNF554-201ENST00000317243 BOLA2Q9H3K6 86 aa23.18■■□□□ 1.3
ZNF554-201ENST00000317243 CRYBG1Q9Y4K1 1723 aa23.18■■□□□ 1.3
ZNF554-201ENST00000317243 OVOS2A0A0G2JMS6 1433 aa23.18■■□□□ 1.3
ZNF554-201ENST00000317243 ADAMTS7Q9UKP4 1686 aa23.18■■□□□ 1.3
ZNF554-201ENST00000317243 GCKRQ14397 625 aa23.17■■□□□ 1.3
ZNF554-201ENST00000317243 ADCK5Q3MIX3 580 aa23.17■■□□□ 1.3
ZNF554-201ENST00000317243 TTC5Q8N0Z6 440 aa23.17■■□□□ 1.3
ZNF554-201ENST00000317243 INTS4Q96HW7 963 aaKnown RBP23.17■■□□□ 1.3
ZNF554-201ENST00000317243 ECHDC1Q9NTX5 307 aa23.17■■□□□ 1.3
ZNF554-201ENST00000317243 SPATA31A3Q5VYP0 1347 aa23.17■■□□□ 1.3
ZNF554-201ENST00000317243 RAD50Q92878 1312 aa23.17■■□□□ 1.3
ZNF554-201ENST00000317243 DDX58O95786 925 aaKnown RBP23.17■■□□□ 1.3
ZNF554-201ENST00000317243 PDCL2Q8N4E4 241 aa23.17■■□□□ 1.3
ZNF554-201ENST00000317243 BRINP3Q76B58 766 aa23.17■■□□□ 1.3
ZNF554-201ENST00000317243 UBE3BQ7Z3V4 1068 aa23.17■■□□□ 1.3
ZNF554-201ENST00000317243 TNS3Q68CZ2 1445 aa23.16■■□□□ 1.3
ZNF554-201ENST00000317243 GLRX3O76003 335 aaKnown RBP23.16■■□□□ 1.3
ZNF554-201ENST00000317243 ANKRD13DQ6ZTN6 518 aa23.16■■□□□ 1.3
ZNF554-201ENST00000317243 LETM1O95202 739 aaPredicted RBP23.16■■□□□ 1.3
ZNF554-201ENST00000317243 CABP4P57796 275 aa23.16■■□□□ 1.3
ZNF554-201ENST00000317243 ANAPC15P60006 121 aa23.16■■□□□ 1.3
ZNF554-201ENST00000317243 CADPS2Q86UW7 1296 aa23.16■■□□□ 1.3
ZNF554-201ENST00000317243 DIAPH3Q9NSV4 1193 aa23.16■■□□□ 1.3
ZNF554-201ENST00000317243 LARGE1O95461 756 aa23.15■■□□□ 1.3
ZNF554-201ENST00000317243 U2AF2P26368 475 aaKnown RBP eCLIP23.15■■□□□ 1.3
ZNF554-201ENST00000317243 HSP90AB4PQ58FF6 505 aa23.15■■□□□ 1.3
ZNF554-201ENST00000317243 TAF6LQ9Y6J9 622 aa23.15■■□□□ 1.3
ZNF554-201ENST00000317243 PLCB2Q00722 1185 aa23.15■■□□□ 1.3
ZNF554-201ENST00000317243 G3BP1Q13283 466 aaKnown RBP eCLIP23.15■■□□□ 1.3
ZNF554-201ENST00000317243 WDR33Q9C0J8 1336 aaKnown RBP23.14■■□□□ 1.3
ZNF554-201ENST00000317243 PRPF40BQ6NWY9 871 aaKnown RBP23.14■■□□□ 1.3
ZNF554-201ENST00000317243 LARP1Q6PKG0 1096 aaKnown RBP23.14■■□□□ 1.3
ZNF554-201ENST00000317243 PHF14O94880 888 aa23.14■■□□□ 1.29
ZNF554-201ENST00000317243 DCAF5Q96JK2 942 aa23.14■■□□□ 1.29
ZNF554-201ENST00000317243 METTL22Q9BUU2 404 aaPredicted RBP23.14■■□□□ 1.29
ZNF554-201ENST00000317243 SNRPA1P09661 255 aaKnown RBP23.13■■□□□ 1.29
ZNF554-201ENST00000317243 HCLS1P14317 486 aaPredicted RBP23.13■■□□□ 1.29
ZNF554-201ENST00000317243 AK2P54819 239 aa23.13■■□□□ 1.29
ZNF554-201ENST00000317243 BBXQ8WY36 941 aaPredicted RBP23.13■■□□□ 1.29
ZNF554-201ENST00000317243 SPTLC3Q9NUV7 552 aa23.13■■□□□ 1.29
ZNF554-201ENST00000317243 CNPY2Q9Y2B0 182 aa23.13■■□□□ 1.29
ZNF554-201ENST00000317243 TOM1L2Q6ZVM7 507 aa23.13■■□□□ 1.29
ZNF554-201ENST00000317243 CHMP4AQ9BY43 222 aa23.13■■□□□ 1.29
ZNF554-201ENST00000317243 PRDM11Q9NQV5 511 aa23.13■■□□□ 1.29
ZNF554-201ENST00000317243 STRN4Q9NRL3 753 aa23.13■■□□□ 1.29
ZNF554-201ENST00000317243 UTYO14607 1347 aa23.12■■□□□ 1.29
ZNF554-201ENST00000317243 NBPF26B4DH59 902 aa23.12■■□□□ 1.29
ZNF554-201ENST00000317243 NEXNQ0ZGT2 675 aa23.12■■□□□ 1.29
ZNF554-201ENST00000317243 NBPF14Q5TI25 921 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms