RNA–Protein interactions for RNA: ENST00000315713.5

ABCD3-201, Transcript of ATP binding cassette subfamily D member 3, humanhuman

TSL 1 (best) BASIC

Gene ABCD3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3-201ENST00000315713 LAS1LQ9Y4W2 734 aaKnown RBP15.8■□□□□ 0.12
ABCD3-201ENST00000315713 THSD7BQ9C0I4 1608 aa15.79■□□□□ 0.12
ABCD3-201ENST00000315713 TAF1P21675 1872 aa15.78■□□□□ 0.12
ABCD3-201ENST00000315713 KLRG2A4D1S0 409 aaPredicted RBP15.78■□□□□ 0.12
ABCD3-201ENST00000315713 HLFQ16534 295 aa15.78■□□□□ 0.12
ABCD3-201ENST00000315713 EAPPQ56P03 285 aaPredicted RBP15.78■□□□□ 0.12
ABCD3-201ENST00000315713 TPTE2Q6XPS3 522 aa15.77■□□□□ 0.12
ABCD3-201ENST00000315713 BABAM1Q9NWV8 329 aa15.77■□□□□ 0.12
ABCD3-201ENST00000315713 RNF123Q5XPI4 1314 aa15.76■□□□□ 0.11
ABCD3-201ENST00000315713 CCER2I3L3R5 266 aa15.76■□□□□ 0.11
ABCD3-201ENST00000315713 FOXN1O15353 648 aa15.76■□□□□ 0.11
ABCD3-201ENST00000315713 IARSP41252 1262 aaKnown RBP15.76■□□□□ 0.11
ABCD3-201ENST00000315713 EIF4A1P60842 406 aaKnown RBP15.76■□□□□ 0.11
ABCD3-201ENST00000315713 CALD1Q05682 793 aaKnown RBP15.76■□□□□ 0.11
ABCD3-201ENST00000315713 RGL2O15211 777 aa15.75■□□□□ 0.11
ABCD3-201ENST00000315713 RTKN2Q8IZC4 609 aa15.75■□□□□ 0.11
ABCD3-201ENST00000315713 HACL1Q9UJ83 578 aa15.75■□□□□ 0.11
ABCD3-201ENST00000315713 RIC1Q4ADV7 1423 aa15.75■□□□□ 0.11
ABCD3-201ENST00000315713 ITGBL1O95965 494 aaPredicted RBP15.74■□□□□ 0.11
ABCD3-201ENST00000315713 EPHX2P34913 555 aa15.74■□□□□ 0.11
ABCD3-201ENST00000315713 SLC51AQ86UW1 340 aa15.74■□□□□ 0.11
ABCD3-201ENST00000315713 NUTM1Q86Y26 1132 aa15.74■□□□□ 0.11
ABCD3-201ENST00000315713 SALL2Q9Y467 1007 aaPredicted RBP15.74■□□□□ 0.11
ABCD3-201ENST00000315713 TMEM88BA6NKF7 163 aa15.73■□□□□ 0.11
ABCD3-201ENST00000315713 CHL1O00533 1208 aa15.73■□□□□ 0.11
ABCD3-201ENST00000315713 GTF2E1P29083 439 aaPredicted RBP15.73■□□□□ 0.11
ABCD3-201ENST00000315713 VEGFBP49765 207 aa15.73■□□□□ 0.11
ABCD3-201ENST00000315713 SYNE4Q8N205 404 aa15.73■□□□□ 0.11
ABCD3-201ENST00000315713 NGEFQ8N5V2 710 aa15.73■□□□□ 0.11
ABCD3-201ENST00000315713 CFAP44Q96MT7 982 aa15.73■□□□□ 0.11
ABCD3-201ENST00000315713 CLEC11AQ9Y240 323 aa15.73■□□□□ 0.11
ABCD3-201ENST00000315713 IBTKQ9P2D0 1353 aaPredicted RBP15.73■□□□□ 0.11
ABCD3-201ENST00000315713 FZD9O00144 591 aa15.72■□□□□ 0.11
ABCD3-201ENST00000315713 GNAI1P63096 354 aa15.72■□□□□ 0.11
ABCD3-201ENST00000315713 CCDC27Q2M243 656 aa15.72■□□□□ 0.11
ABCD3-201ENST00000315713 CRY2Q49AN0 593 aa15.72■□□□□ 0.11
ABCD3-201ENST00000315713 MAP1SQ66K74 1059 aaPredicted RBP15.72■□□□□ 0.11
ABCD3-201ENST00000315713 IFT57Q9NWB7 429 aa15.72■□□□□ 0.11
ABCD3-201ENST00000315713 MAP3K15Q6ZN16 1313 aa15.71■□□□□ 0.11
ABCD3-201ENST00000315713 UBN2Q6ZU65 1347 aa15.71■□□□□ 0.11
ABCD3-201ENST00000315713 ALDH1B1P30837 517 aa15.71■□□□□ 0.11
ABCD3-201ENST00000315713 TTLL7Q6ZT98 887 aa15.71■□□□□ 0.11
ABCD3-201ENST00000315713 WWC1Q8IX03 1113 aa15.71■□□□□ 0.11
ABCD3-201ENST00000315713 PSMD1Q99460 953 aa15.71■□□□□ 0.11
ABCD3-201ENST00000315713 NYXQ9GZU5 481 aa15.71■□□□□ 0.11
ABCD3-201ENST00000315713 GPTP24298 496 aa15.7■□□□□ 0.1
ABCD3-201ENST00000315713 NCBP3Q53F19 620 aaKnown RBP15.7■□□□□ 0.1
ABCD3-201ENST00000315713 KIF6Q6ZMV9 814 aa15.7■□□□□ 0.1
ABCD3-201ENST00000315713 MIER1Q8N108 512 aa15.7■□□□□ 0.1
ABCD3-201ENST00000315713 GPC2Q8N158 579 aa15.7■□□□□ 0.1
ABCD3-201ENST00000315713 AIDAQ96BJ3 306 aa15.7■□□□□ 0.1
ABCD3-201ENST00000315713 MBIPQ9NS73 344 aa15.7■□□□□ 0.1
ABCD3-201ENST00000315713 DDX60Q8IY21 1712 aaKnown RBP15.7■□□□□ 0.1
ABCD3-201ENST00000315713 POLR2AP24928 1970 aaKnown RBP15.69■□□□□ 0.1
ABCD3-201ENST00000315713 LRRC37AA6NMS7 1700 aa15.69■□□□□ 0.1
ABCD3-201ENST00000315713 EIF2S2P20042 333 aaKnown RBP15.69■□□□□ 0.1
ABCD3-201ENST00000315713 CNTROBQ8N137 903 aa15.69■□□□□ 0.1
ABCD3-201ENST00000315713 RPGRQ92834 1020 aaKnown RBP15.69■□□□□ 0.1
ABCD3-201ENST00000315713 ZBTB3Q9H5J0 574 aa15.69■□□□□ 0.1
ABCD3-201ENST00000315713 GJA3Q9Y6H8 435 aa15.69■□□□□ 0.1
ABCD3-201ENST00000315713 ERVV-1B6SEH8 477 aa15.68■□□□□ 0.1
ABCD3-201ENST00000315713 ZNF853P0CG23 659 aa15.68■□□□□ 0.1
ABCD3-201ENST00000315713 MYL6BP14649 208 aa15.68■□□□□ 0.1
ABCD3-201ENST00000315713 CTCFP49711 727 aaPredicted RBP15.68■□□□□ 0.1
ABCD3-201ENST00000315713 KRT24Q2M2I5 525 aa15.68■□□□□ 0.1
ABCD3-201ENST00000315713 PNMA8AQ86V59 439 aaPredicted RBP15.68■□□□□ 0.1
ABCD3-201ENST00000315713 JDP2Q8WYK2 163 aa15.68■□□□□ 0.1
ABCD3-201ENST00000315713 PRDM10Q9NQV6 1147 aa15.68■□□□□ 0.1
ABCD3-201ENST00000315713 RASSF10A6NK89 507 aa15.67■□□□□ 0.1
ABCD3-201ENST00000315713 PPEF1O14829 653 aaPredicted RBP15.67■□□□□ 0.1
ABCD3-201ENST00000315713 NTSR2O95665 410 aa15.67■□□□□ 0.1
ABCD3-201ENST00000315713 EIF6P56537 245 aaKnown RBP15.67■□□□□ 0.1
ABCD3-201ENST00000315713 SUSD4Q5VX71 490 aa15.67■□□□□ 0.1
ABCD3-201ENST00000315713 C3orf67Q6ZVT6 689 aa15.67■□□□□ 0.1
ABCD3-201ENST00000315713 CASP8AP2Q9UKL3 1982 aa15.67■□□□□ 0.1
ABCD3-201ENST00000315713 TCERG1O14776 1098 aaKnown RBP15.66■□□□□ 0.1
ABCD3-201ENST00000315713 SCNN1DP51172 638 aa15.66■□□□□ 0.1
ABCD3-201ENST00000315713 LBX1P52954 281 aa15.66■□□□□ 0.1
ABCD3-201ENST00000315713 NECTIN2Q92692 538 aa15.66■□□□□ 0.1
ABCD3-201ENST00000315713 WBP1LQ9NX94 342 aa15.66■□□□□ 0.1
ABCD3-201ENST00000315713 ABT1Q9ULW3 272 aaKnown RBP15.66■□□□□ 0.1
ABCD3-201ENST00000315713 ERBB4Q15303 1308 aa15.66■□□□□ 0.1
ABCD3-201ENST00000315713 HSPA8P11142 646 aaKnown RBP15.65■□□□□ 0.1
ABCD3-201ENST00000315713 LMOD1P29536 600 aaPredicted RBP15.65■□□□□ 0.1
ABCD3-201ENST00000315713 HOXA10P31260 410 aaPredicted RBP15.65■□□□□ 0.1
ABCD3-201ENST00000315713 FMR1Q06787 632 aaKnown RBP eCLIP15.65■□□□□ 0.13e-9■■■■■ 33
ABCD3-201ENST00000315713 DUSP27Q5VZP5 1158 aa15.65■□□□□ 0.1
ABCD3-201ENST00000315713 CC2D2BQ6DHV5 1058 aa15.65■□□□□ 0.1
ABCD3-201ENST00000315713 WDR63Q8IWG1 891 aa15.65■□□□□ 0.1
ABCD3-201ENST00000315713 LARGE2Q8N3Y3 721 aa15.65■□□□□ 0.1
ABCD3-201ENST00000315713 TSR2Q969E8 191 aaKnown RBP15.65■□□□□ 0.1
ABCD3-201ENST00000315713 DUOX1Q9NRD9 1551 aa15.65■□□□□ 0.1
ABCD3-201ENST00000315713 IL16Q14005 1332 aa15.65■□□□□ 0.1
ABCD3-201ENST00000315713 HOXB7P09629 217 aa15.64■□□□□ 0.09
ABCD3-201ENST00000315713 EPS15P42566 896 aa15.64■□□□□ 0.09
ABCD3-201ENST00000315713 DEFB115Q30KQ5 88 aa15.64■□□□□ 0.09
ABCD3-201ENST00000315713 HDGFL1Q5TGJ6 251 aa15.64■□□□□ 0.09
ABCD3-201ENST00000315713 ZNF34Q8IZ26 560 aa15.64■□□□□ 0.09
ABCD3-201ENST00000315713 RBM17Q96I25 401 aaKnown RBP15.64■□□□□ 0.09
ABCD3-201ENST00000315713 DDX21Q9NR30 783 aaKnown RBP eCLIP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 313.2 ms