RNA–Protein interactions for RNA: ENST00000315585.11

CHFR-202, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-202ENST00000315585 CWF19L2Q2TBE0 894 aaKnown RBP17.97■□□□□ 0.47
CHFR-202ENST00000315585 LRP10Q7Z4F1 713 aa17.97■□□□□ 0.47
CHFR-202ENST00000315585 ZDHHC9Q9Y397 364 aa17.97■□□□□ 0.47
CHFR-202ENST00000315585 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.97■□□□□ 0.47
CHFR-202ENST00000315585 LRP6O75581 1613 aa17.96■□□□□ 0.47
CHFR-202ENST00000315585 CLCN1P35523 988 aa17.96■□□□□ 0.47
CHFR-202ENST00000315585 PKP1Q13835 747 aa17.96■□□□□ 0.47
CHFR-202ENST00000315585 CAVIN1Q6NZI2 390 aaKnown RBP17.96■□□□□ 0.47
CHFR-202ENST00000315585 VSIG10Q8N0Z9 540 aa17.96■□□□□ 0.47
CHFR-202ENST00000315585 PLBD2Q8NHP8 589 aa17.96■□□□□ 0.47
CHFR-202ENST00000315585 NEURL1BA8MQ27 555 aa17.95■□□□□ 0.46
CHFR-202ENST00000315585 PIP4K2BP78356 416 aa17.95■□□□□ 0.46
CHFR-202ENST00000315585 ZSCAN23Q3MJ62 389 aa17.95■□□□□ 0.46
CHFR-202ENST00000315585 MYD88Q99836 296 aa17.95■□□□□ 0.46
CHFR-202ENST00000315585 ADAMTS2O95450 1211 aa17.94■□□□□ 0.46
CHFR-202ENST00000315585 LSG1Q9H089 658 aaKnown RBP17.94■□□□□ 0.46
CHFR-202ENST00000315585 TOGARAM1Q9Y4F4 1720 aa17.94■□□□□ 0.46
CHFR-202ENST00000315585 WNK3Q9BYP7 1800 aa17.94■□□□□ 0.46
CHFR-202ENST00000315585 LIMCH1Q9UPQ0 1083 aa17.94■□□□□ 0.46
CHFR-202ENST00000315585 ATP6V1DQ9Y5K8 247 aa17.94■□□□□ 0.46
CHFR-202ENST00000315585 PTCD1O75127 700 aaKnown RBP17.93■□□□□ 0.46
CHFR-202ENST00000315585 IGKV5-2P06315 115 aa17.93■□□□□ 0.46
CHFR-202ENST00000315585 GCKRQ14397 625 aa17.93■□□□□ 0.46
CHFR-202ENST00000315585 CWC27Q6UX04 472 aaKnown RBP17.93■□□□□ 0.46
CHFR-202ENST00000315585 UPF3BQ9BZI7 483 aaKnown RBP17.93■□□□□ 0.46
CHFR-202ENST00000315585 ZKSCAN1P17029 563 aaPredicted RBP17.93■□□□□ 0.46
CHFR-202ENST00000315585 PPP1R9BQ96SB3 815 aa17.93■□□□□ 0.46
CHFR-202ENST00000315585 TM6SF1Q9BZW5 370 aa17.93■□□□□ 0.46
CHFR-202ENST00000315585 SNX14Q9Y5W7 946 aa17.93■□□□□ 0.46
CHFR-202ENST00000315585 PHF14O94880 888 aa17.92■□□□□ 0.46
CHFR-202ENST00000315585 ZSCAN31Q96LW9 406 aaPredicted RBP17.92■□□□□ 0.46
CHFR-202ENST00000315585 NRAPQ86VF7 1730 aa17.92■□□□□ 0.46
CHFR-202ENST00000315585 SPATA31A1Q5TZJ5 1347 aa17.92■□□□□ 0.46
CHFR-202ENST00000315585 NWD2Q9ULI1 1742 aa17.92■□□□□ 0.46
CHFR-202ENST00000315585 ESPNB1AK53 854 aa17.92■□□□□ 0.46
CHFR-202ENST00000315585 MAP4K4O95819 1239 aaPredicted RBP17.92■□□□□ 0.46
CHFR-202ENST00000315585 AACSQ86V21 672 aa17.92■□□□□ 0.46
CHFR-202ENST00000315585 KLHL34Q8N239 644 aa17.92■□□□□ 0.46
CHFR-202ENST00000315585 RRAGDQ9NQL2 400 aaPredicted RBP17.92■□□□□ 0.46
CHFR-202ENST00000315585 UBAP1LF5GYI3 381 aa17.91■□□□□ 0.46
CHFR-202ENST00000315585 PIGBQ92521 554 aa17.91■□□□□ 0.46
CHFR-202ENST00000315585 SH2B1Q9NRF2 756 aaPredicted RBP17.91■□□□□ 0.46
CHFR-202ENST00000315585 ARFGEF2Q9Y6D5 1785 aa17.91■□□□□ 0.46
CHFR-202ENST00000315585 NUTM2BA6NNL0 878 aaPredicted RBP17.9■□□□□ 0.46
CHFR-202ENST00000315585 NUTM2EB1AL46 878 aaPredicted RBP17.9■□□□□ 0.46
CHFR-202ENST00000315585 STARD3NLO95772 234 aa17.9■□□□□ 0.46
CHFR-202ENST00000315585 NUTM2AQ8IVF1 878 aaPredicted RBP17.9■□□□□ 0.46
CHFR-202ENST00000315585 SUCLG2Q96I99 432 aa17.9■□□□□ 0.46
CHFR-202ENST00000315585 COL15A1P39059 1388 aa17.9■□□□□ 0.46
CHFR-202ENST00000315585 NBPF26B4DH59 902 aa17.9■□□□□ 0.46
CHFR-202ENST00000315585 CSPP1Q1MSJ5 1256 aa17.9■□□□□ 0.46
CHFR-202ENST00000315585 HS1BP3Q53T59 392 aa17.9■□□□□ 0.46
CHFR-202ENST00000315585 NBPF14Q5TI25 921 aa17.9■□□□□ 0.46
CHFR-202ENST00000315585 VPS53Q5VIR6 699 aa17.9■□□□□ 0.46
CHFR-202ENST00000315585 NBPF10Q6P3W6 841 aaKnown RBP17.9■□□□□ 0.46
CHFR-202ENST00000315585 NBPF15Q8N660 670 aa17.9■□□□□ 0.46
CHFR-202ENST00000315585 TTC14Q96N46 770 aa17.9■□□□□ 0.46
CHFR-202ENST00000315585 PSMA5P28066 241 aa17.89■□□□□ 0.45
CHFR-202ENST00000315585 DDB1Q16531 1140 aa17.89■□□□□ 0.45
CHFR-202ENST00000315585 RNF20Q5VTR2 975 aa17.89■□□□□ 0.45
CHFR-202ENST00000315585 KCNB2Q92953 911 aa17.89■□□□□ 0.45
CHFR-202ENST00000315585 BCL9O00512 1426 aa17.89■□□□□ 0.45
CHFR-202ENST00000315585 PIP4K2AP48426 406 aaPredicted RBP17.89■□□□□ 0.45
CHFR-202ENST00000315585 LRSAM1Q6UWE0 723 aa17.89■□□□□ 0.45
CHFR-202ENST00000315585 NOL8Q76FK4 1167 aaKnown RBP17.89■□□□□ 0.45
CHFR-202ENST00000315585 GPT2Q8TD30 523 aa17.89■□□□□ 0.45
CHFR-202ENST00000315585 BICC1Q9H694 974 aaKnown RBP17.89■□□□□ 0.45
CHFR-202ENST00000315585 ATG3Q9NT62 314 aa17.89■□□□□ 0.45
CHFR-202ENST00000315585 CYP46A1Q9Y6A2 500 aa17.89■□□□□ 0.45
CHFR-202ENST00000315585 ITGB4P16144 1822 aa17.88■□□□□ 0.45
CHFR-202ENST00000315585 A1BGP04217 495 aa17.88■□□□□ 0.45
CHFR-202ENST00000315585 BARGINQ6ZT62 677 aa17.88■□□□□ 0.45
CHFR-202ENST00000315585 IL25Q9H293 177 aa17.88■□□□□ 0.45
CHFR-202ENST00000315585 SMC3Q9UQE7 1217 aa17.88■□□□□ 0.45
CHFR-202ENST00000315585 SPATA31A5Q5VU36 1347 aa17.87■□□□□ 0.45
CHFR-202ENST00000315585 SPATA31A7Q8IWB4 1347 aa17.87■□□□□ 0.45
CHFR-202ENST00000315585 AFDNP55196 1824 aaKnown RBP17.87■□□□□ 0.45
CHFR-202ENST00000315585 SLIT2O94813 1529 aa17.87■□□□□ 0.45
CHFR-202ENST00000315585 ASAP1Q9ULH1 1129 aa17.87■□□□□ 0.45
CHFR-202ENST00000315585 CASTP20810 708 aaKnown RBP17.87■□□□□ 0.45
CHFR-202ENST00000315585 AK2P54819 239 aa17.87■□□□□ 0.45
CHFR-202ENST00000315585 SNRKQ9NRH2 765 aa17.87■□□□□ 0.45
CHFR-202ENST00000315585 PA2G4Q9UQ80 394 aaKnown RBP17.87■□□□□ 0.45
CHFR-202ENST00000315585 JCADQ9P266 1359 aa17.86■□□□□ 0.45
CHFR-202ENST00000315585 KCNJ4P48050 445 aa17.86■□□□□ 0.45
CHFR-202ENST00000315585 ANKRD1Q15327 319 aa17.86■□□□□ 0.45
CHFR-202ENST00000315585 PDRG1Q9NUG6 133 aa17.86■□□□□ 0.45
CHFR-202ENST00000315585 A0A087WZG4 1122 aa17.86■□□□□ 0.45
CHFR-202ENST00000315585 LETM1O95202 739 aaPredicted RBP17.86■□□□□ 0.45
CHFR-202ENST00000315585 KAZALD1Q96I82 304 aa17.86■□□□□ 0.45
CHFR-202ENST00000315585 ZSWIM6Q9HCJ5 1215 aa17.86■□□□□ 0.45
CHFR-202ENST00000315585 CWC25Q9NXE8 425 aaPredicted RBP17.86■□□□□ 0.45
CHFR-202ENST00000315585 CCDC9Q9Y3X0 531 aaKnown RBP17.86■□□□□ 0.45
CHFR-202ENST00000315585 CCDC171Q6TFL3 1326 aa17.85■□□□□ 0.45
CHFR-202ENST00000315585 SASH1O94885 1247 aa17.85■□□□□ 0.45
CHFR-202ENST00000315585 TMEM87AQ8NBN3 555 aa17.85■□□□□ 0.45
CHFR-202ENST00000315585 CCDC191Q8NCU4 936 aa17.85■□□□□ 0.45
CHFR-202ENST00000315585 KIF6Q6ZMV9 814 aa17.84■□□□□ 0.45
CHFR-202ENST00000315585 RASEFQ8IZ41 740 aa17.84■□□□□ 0.45
CHFR-202ENST00000315585 COPRSQ9NQ92 184 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms