RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 ESPNB1AK53 854 aa7.29□□□□□ -1.24
PRKDC-201ENST00000314191 RAB3GAP1Q15042 981 aa7.29□□□□□ -1.24
PRKDC-201ENST00000314191 NAPBQ9H115 298 aa7.29□□□□□ -1.24
PRKDC-201ENST00000314191 ZSCAN22P10073 491 aaPredicted RBP7.29□□□□□ -1.24
PRKDC-201ENST00000314191 ZNF652Q9Y2D9 606 aa7.29□□□□□ -1.24
PRKDC-201ENST00000314191 UNC5CLQ8IV45 518 aa7.29□□□□□ -1.24
PRKDC-201ENST00000314191 PIBF1Q8WXW3 757 aa7.29□□□□□ -1.24
PRKDC-201ENST00000314191 PCDH11XQ9BZA7 1347 aa7.29□□□□□ -1.24
PRKDC-201ENST00000314191 PCDH11YQ9BZA8 1340 aa7.29□□□□□ -1.24
PRKDC-201ENST00000314191 UNC13BO14795 1591 aa7.29□□□□□ -1.24
PRKDC-201ENST00000314191 CKAP2LQ8IYA6 745 aa7.29□□□□□ -1.24
PRKDC-201ENST00000314191 MCMDC2Q4G0Z9 681 aa7.29□□□□□ -1.24
PRKDC-201ENST00000314191 BCORL1Q5H9F3 1711 aa7.29□□□□□ -1.24
PRKDC-201ENST00000314191 SGSM2O43147 1006 aa7.29□□□□□ -1.24
PRKDC-201ENST00000314191 SLC5A1P13866 664 aa7.29□□□□□ -1.24
PRKDC-201ENST00000314191 MAP3K12Q12852 859 aa7.29□□□□□ -1.24
PRKDC-201ENST00000314191 TTLL7Q6ZT98 887 aa7.29□□□□□ -1.24
PRKDC-201ENST00000314191 EYA2O00167 538 aa7.28□□□□□ -1.24
PRKDC-201ENST00000314191 TRIM22Q8IYM9 498 aa7.28□□□□□ -1.24
PRKDC-201ENST00000314191 EAF2Q96CJ1 260 aaPredicted RBP7.28□□□□□ -1.24
PRKDC-201ENST00000314191 CNPY2Q9Y2B0 182 aa7.28□□□□□ -1.24
PRKDC-201ENST00000314191 PNPLA6Q8IY17 1366 aa7.28□□□□□ -1.24
PRKDC-201ENST00000314191 HMGB1P09429 215 aaKnown RBP7.28□□□□□ -1.24
PRKDC-201ENST00000314191 CCDC129Q6ZRS4 1044 aa7.28□□□□□ -1.24
PRKDC-201ENST00000314191 CHST3Q7LGC8 479 aa7.28□□□□□ -1.24
PRKDC-201ENST00000314191 FAM13BQ9NYF5 915 aa7.28□□□□□ -1.24
PRKDC-201ENST00000314191 POLR3DP05423 398 aaPredicted RBP7.28□□□□□ -1.24
PRKDC-201ENST00000314191 UBAC1Q9BSL1 405 aa7.28□□□□□ -1.24
PRKDC-201ENST00000314191 BRMS1Q9HCU9 246 aa7.28□□□□□ -1.24
PRKDC-201ENST00000314191 PAG1Q9NWQ8 432 aa7.28□□□□□ -1.24
PRKDC-201ENST00000314191 KIF24Q5T7B8 1368 aa7.28□□□□□ -1.24
PRKDC-201ENST00000314191 CFAP45Q9UL16 551 aa7.28□□□□□ -1.24
PRKDC-201ENST00000314191 CREB3L3Q68CJ9 461 aa7.28□□□□□ -1.24
PRKDC-201ENST00000314191 TRIM34Q9BYJ4 488 aa7.28□□□□□ -1.24
PRKDC-201ENST00000314191 CCDC171Q6TFL3 1326 aa7.28□□□□□ -1.24
PRKDC-201ENST00000314191 TNNI3KQ59H18 835 aa7.28□□□□□ -1.24
PRKDC-201ENST00000314191 FAM173BQ6P4H8 233 aa7.28□□□□□ -1.24
PRKDC-201ENST00000314191 PALD1Q9ULE6 856 aa7.28□□□□□ -1.24
PRKDC-201ENST00000314191 FPGT-TNNI3KV9GXZ4 949 aa7.28□□□□□ -1.24
PRKDC-201ENST00000314191 IRS4O14654 1257 aaPredicted RBP7.28□□□□□ -1.24
PRKDC-201ENST00000314191 CAVIN4Q5BKX8 364 aa7.28□□□□□ -1.24
PRKDC-201ENST00000314191 SLC9C2Q5TAH2 1124 aa7.28□□□□□ -1.24
PRKDC-201ENST00000314191 UQCRFS1P1P0C7P4 283 aa7.28□□□□□ -1.24
PRKDC-201ENST00000314191 MAP3K11Q16584 847 aa7.28□□□□□ -1.24
PRKDC-201ENST00000314191 CCDC144CPQ8IYA2 1237 aa7.28□□□□□ -1.24
PRKDC-201ENST00000314191 HECW2Q9P2P5 1572 aa7.28□□□□□ -1.24
PRKDC-201ENST00000314191 USP25Q9UHP3 1055 aa7.28□□□□□ -1.24
PRKDC-201ENST00000314191 RNF113AO15541 343 aaKnown RBP7.27□□□□□ -1.24
PRKDC-201ENST00000314191 AXIN2Q9Y2T1 843 aa7.27□□□□□ -1.24
PRKDC-201ENST00000314191 LMTK2Q8IWU2 1503 aa7.27□□□□□ -1.24
PRKDC-201ENST00000314191 ERBB3P21860 1342 aa7.27□□□□□ -1.25
PRKDC-201ENST00000314191 USP48Q86UV5 1035 aa7.27□□□□□ -1.25
PRKDC-201ENST00000314191 ZPR1O75312 459 aa7.27□□□□□ -1.25
PRKDC-201ENST00000314191 CLSTN1O94985 981 aa7.27□□□□□ -1.25
PRKDC-201ENST00000314191 F13A1P00488 732 aa7.27□□□□□ -1.25
PRKDC-201ENST00000314191 C8orf76Q96K31 380 aa7.27□□□□□ -1.25
PRKDC-201ENST00000314191 GOLGA8AA7E2F4 631 aa7.27□□□□□ -1.25
PRKDC-201ENST00000314191 GOLGA8BA8MQT2 603 aa7.27□□□□□ -1.25
PRKDC-201ENST00000314191 IFIT3O14879 490 aaKnown RBP7.27□□□□□ -1.25
PRKDC-201ENST00000314191 HOOK1Q9UJC3 728 aaKnown RBP7.27□□□□□ -1.25
PRKDC-201ENST00000314191 ADGRB3O60242 1522 aa7.27□□□□□ -1.25
PRKDC-201ENST00000314191 PRIM1P49642 420 aaKnown RBP7.27□□□□□ -1.25
PRKDC-201ENST00000314191 NAT10Q9H0A0 1025 aaKnown RBP7.27□□□□□ -1.25
PRKDC-201ENST00000314191 NIP7Q9Y221 180 aaKnown RBP eCLIP7.27□□□□□ -1.25
PRKDC-201ENST00000314191 MADDQ8WXG6 1647 aa7.27□□□□□ -1.25
PRKDC-201ENST00000314191 ZSCAN23Q3MJ62 389 aa7.27□□□□□ -1.25
PRKDC-201ENST00000314191 FILIP1Q7Z7B0 1213 aa7.27□□□□□ -1.25
PRKDC-201ENST00000314191 SCAND2PQ9GZW5 306 aaPredicted RBP7.27□□□□□ -1.25
PRKDC-201ENST00000314191 NPHP4O75161 1426 aaPredicted RBP7.27□□□□□ -1.25
PRKDC-201ENST00000314191 A0A1B0GUL7 405 aa7.27□□□□□ -1.25
PRKDC-201ENST00000314191 OLFM4Q6UX06 510 aa7.27□□□□□ -1.25
PRKDC-201ENST00000314191 JMYQ8N9B5 988 aa7.27□□□□□ -1.25
PRKDC-201ENST00000314191 TULP4Q9NRJ4 1543 aa7.27□□□□□ -1.25
PRKDC-201ENST00000314191 KLF18A0A0U1RQI7 1052 aa7.26□□□□□ -1.25
PRKDC-201ENST00000314191 DNM1Q05193 864 aaKnown RBP7.26□□□□□ -1.25
PRKDC-201ENST00000314191 APOBRQ0VD83 1088 aa7.26□□□□□ -1.25
PRKDC-201ENST00000314191 ZSCAN30Q86W11 494 aa7.26□□□□□ -1.25
PRKDC-201ENST00000314191 HOMER1Q86YM7 354 aa7.26□□□□□ -1.25
PRKDC-201ENST00000314191 CHAMP1Q96JM3 812 aa7.26□□□□□ -1.25
PRKDC-201ENST00000314191 TRPM1Q7Z4N2 1603 aa7.26□□□□□ -1.25
PRKDC-201ENST00000314191 MYO5CQ9NQX4 1742 aa7.26□□□□□ -1.25
PRKDC-201ENST00000314191 MAP3K4Q9Y6R4 1608 aa7.26□□□□□ -1.25
PRKDC-201ENST00000314191 GIMAP6Q6P9H5 292 aa7.26□□□□□ -1.25
PRKDC-201ENST00000314191 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.26□□□□□ -1.25
PRKDC-201ENST00000314191 PDILTQ8N807 584 aa7.26□□□□□ -1.25
PRKDC-201ENST00000314191 CCDC183Q5T5S1 534 aa7.26□□□□□ -1.25
PRKDC-201ENST00000314191 HMG20BQ9P0W2 317 aa7.26□□□□□ -1.25
PRKDC-201ENST00000314191 SMC2O95347 1197 aa7.26□□□□□ -1.25
PRKDC-201ENST00000314191 CD2BP2O95400 341 aaKnown RBP7.26□□□□□ -1.25
PRKDC-201ENST00000314191 SLC3A2P08195 630 aaKnown RBP7.26□□□□□ -1.25
PRKDC-201ENST00000314191 ORC3Q9UBD5 711 aaPredicted RBP7.26□□□□□ -1.25
PRKDC-201ENST00000314191 CDKL5O76039 1030 aa7.26□□□□□ -1.25
PRKDC-201ENST00000314191 HMGN5P82970 282 aaKnown RBP7.26□□□□□ -1.25
PRKDC-201ENST00000314191 Q6ZUG5 572 aa7.26□□□□□ -1.25
PRKDC-201ENST00000314191 MICU3Q86XE3 530 aa7.26□□□□□ -1.25
PRKDC-201ENST00000314191 NEURL1BA8MQ27 555 aa7.26□□□□□ -1.25
PRKDC-201ENST00000314191 CCDC191Q8NCU4 936 aa7.26□□□□□ -1.25
PRKDC-201ENST00000314191 CHD1O14646 1710 aa7.26□□□□□ -1.25
PRKDC-201ENST00000314191 SLC4A8Q2Y0W8 1093 aa7.26□□□□□ -1.25
PRKDC-201ENST00000314191 RUFY3Q7L099 469 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 448.6 ms