RNA–Protein interactions for RNA: ENST00000310232.10

CCDC13-201, Transcript of coiled-coil domain containing 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC13, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13-201ENST00000310232 ZSWIM6Q9HCJ5 1215 aa16.01■□□□□ 0.15
CCDC13-201ENST00000310232 SBNO1A3KN83 1393 aa16.01■□□□□ 0.15
CCDC13-201ENST00000310232 LETM1O95202 739 aaPredicted RBP16.01■□□□□ 0.15
CCDC13-201ENST00000310232 TNMDQ9H2S6 317 aa16.01■□□□□ 0.15
CCDC13-201ENST00000310232 ATP6V1DQ9Y5K8 247 aa16.01■□□□□ 0.15
CCDC13-201ENST00000310232 AOX1Q06278 1338 aa16.01■□□□□ 0.15
CCDC13-201ENST00000310232 NECTIN1Q15223 517 aa16.01■□□□□ 0.15
CCDC13-201ENST00000310232 VPS53Q5VIR6 699 aa16.01■□□□□ 0.15
CCDC13-201ENST00000310232 ZNF589Q86UQ0 364 aaPredicted RBP16.01■□□□□ 0.15
CCDC13-201ENST00000310232 FAM200AQ8TCP9 573 aa16.01■□□□□ 0.15
CCDC13-201ENST00000310232 MAP3K5Q99683 1374 aa16■□□□□ 0.15
CCDC13-201ENST00000310232 CCDC171Q6TFL3 1326 aa16■□□□□ 0.15
CCDC13-201ENST00000310232 USP27XA6NNY8 438 aa16■□□□□ 0.15
CCDC13-201ENST00000310232 CEBPAP49715 358 aaPredicted RBP16■□□□□ 0.15
CCDC13-201ENST00000310232 MPRIPQ6WCQ1 1025 aa16■□□□□ 0.15
CCDC13-201ENST00000310232 ESF1Q9H501 851 aaKnown RBP16■□□□□ 0.15
CCDC13-201ENST00000310232 NALCNQ8IZF0 1738 aa16■□□□□ 0.15
CCDC13-201ENST00000310232 GLRX3O76003 335 aaKnown RBP16■□□□□ 0.15
CCDC13-201ENST00000310232 IFIT2P09913 472 aaKnown RBP16■□□□□ 0.15
CCDC13-201ENST00000310232 NCBP1Q09161 790 aaKnown RBP16■□□□□ 0.15
CCDC13-201ENST00000310232 AIMP1Q12904 312 aaKnown RBP16■□□□□ 0.15
CCDC13-201ENST00000310232 CLASRPQ8N2M8 674 aaKnown RBP16■□□□□ 0.15
CCDC13-201ENST00000310232 SYTL4Q96C24 671 aaPredicted RBP16■□□□□ 0.15
CCDC13-201ENST00000310232 KRT85P78386 507 aa15.99■□□□□ 0.15
CCDC13-201ENST00000310232 PGBD1Q96JS3 809 aa15.99■□□□□ 0.15
CCDC13-201ENST00000310232 SPATA31D1Q6ZQQ2 1576 aa15.99■□□□□ 0.15
CCDC13-201ENST00000310232 CACTINQ8WUQ7 758 aaKnown RBP15.99■□□□□ 0.15
CCDC13-201ENST00000310232 EAF2Q96CJ1 260 aaPredicted RBP15.99■□□□□ 0.15
CCDC13-201ENST00000310232 SPATA32Q96LK8 384 aa15.99■□□□□ 0.15
CCDC13-201ENST00000310232 ECHDC1Q9NTX5 307 aa15.99■□□□□ 0.15
CCDC13-201ENST00000310232 ADCY9O60503 1353 aa15.99■□□□□ 0.15
CCDC13-201ENST00000310232 SLC27A2O14975 620 aa15.98■□□□□ 0.15
CCDC13-201ENST00000310232 CHAF1AQ13111 956 aaPredicted RBP15.98■□□□□ 0.15
CCDC13-201ENST00000310232 SLFNL1Q499Z3 407 aa15.98■□□□□ 0.15
CCDC13-201ENST00000310232 C9orf78Q9NZ63 289 aaPredicted RBP15.98■□□□□ 0.15
CCDC13-201ENST00000310232 MAP3K2Q9Y2U5 619 aa15.98■□□□□ 0.15
CCDC13-201ENST00000310232 GOLGA6L4A6NEF3 574 aa15.98■□□□□ 0.15
CCDC13-201ENST00000310232 LRRC59Q96AG4 307 aaKnown RBP15.98■□□□□ 0.15
CCDC13-201ENST00000310232 EIF4A1P60842 406 aaKnown RBP15.98■□□□□ 0.15
CCDC13-201ENST00000310232 BICD2Q8TD16 824 aa15.98■□□□□ 0.15
CCDC13-201ENST00000310232 PTPRUQ92729 1446 aa15.98■□□□□ 0.15
CCDC13-201ENST00000310232 NPHP1O15259 732 aa15.97■□□□□ 0.15
CCDC13-201ENST00000310232 TOB2Q14106 344 aaPredicted RBP15.97■□□□□ 0.15
CCDC13-201ENST00000310232 CCDC129Q6ZRS4 1044 aa15.97■□□□□ 0.15
CCDC13-201ENST00000310232 ADAMTS13Q76LX8 1427 aa15.97■□□□□ 0.15
CCDC13-201ENST00000310232 CACNA1FO60840 1977 aa15.97■□□□□ 0.15
CCDC13-201ENST00000310232 SASH1O94885 1247 aa15.97■□□□□ 0.15
CCDC13-201ENST00000310232 TNNT1P13805 278 aa15.97■□□□□ 0.15
CCDC13-201ENST00000310232 ZSCAN25Q6NSZ9 544 aa15.97■□□□□ 0.15
CCDC13-201ENST00000310232 ABTB2Q8N961 1025 aa15.97■□□□□ 0.15
CCDC13-201ENST00000310232 AMOTL2Q9Y2J4 779 aa15.97■□□□□ 0.15
CCDC13-201ENST00000310232 USP16Q9Y5T5 823 aa15.97■□□□□ 0.15
CCDC13-201ENST00000310232 ZKSCAN1P17029 563 aaPredicted RBP15.96■□□□□ 0.15
CCDC13-201ENST00000310232 LEO1Q8WVC0 666 aaPredicted RBP15.96■□□□□ 0.15
CCDC13-201ENST00000310232 ANKRD7Q92527 254 aa15.96■□□□□ 0.15
CCDC13-201ENST00000310232 TECPR2O15040 1411 aa15.96■□□□□ 0.15
CCDC13-201ENST00000310232 SEC62Q99442 399 aaKnown RBP15.96■□□□□ 0.15
CCDC13-201ENST00000310232 PIP4K2AP48426 406 aaPredicted RBP15.95■□□□□ 0.14
CCDC13-201ENST00000310232 ZNF165P49910 485 aa15.95■□□□□ 0.14
CCDC13-201ENST00000310232 NBPF6Q5VWK0 638 aa15.95■□□□□ 0.14
CCDC13-201ENST00000310232 C11orf57Q6ZUT1 292 aaPredicted RBP15.95■□□□□ 0.14
CCDC13-201ENST00000310232 NBPF4Q96M43 638 aa15.95■□□□□ 0.14
CCDC13-201ENST00000310232 FSD1Q9BTV5 496 aa15.95■□□□□ 0.14
CCDC13-201ENST00000310232 TRMT1Q9NXH9 659 aaKnown RBP15.95■□□□□ 0.14
CCDC13-201ENST00000310232 ZNF75DP51815 510 aa15.95■□□□□ 0.14
CCDC13-201ENST00000310232 BLOC1S2Q6QNY1 142 aa15.95■□□□□ 0.14
CCDC13-201ENST00000310232 RUFY2Q8WXA3 655 aa15.95■□□□□ 0.14
CCDC13-201ENST00000310232 KAZALD1Q96I82 304 aa15.95■□□□□ 0.14
CCDC13-201ENST00000310232 SUCLG2Q96I99 432 aa15.95■□□□□ 0.14
CCDC13-201ENST00000310232 SH2B1Q9NRF2 756 aaPredicted RBP15.95■□□□□ 0.14
CCDC13-201ENST00000310232 CLIP2Q9UDT6 1046 aa15.95■□□□□ 0.14
CCDC13-201ENST00000310232 GOLGA6L6A8MZA4 724 aa15.94■□□□□ 0.14
CCDC13-201ENST00000310232 CTIFO43310 598 aaKnown RBP15.94■□□□□ 0.14
CCDC13-201ENST00000310232 BICC1Q9H694 974 aaKnown RBP15.94■□□□□ 0.14
CCDC13-201ENST00000310232 TAOK2Q9UL54 1235 aa15.94■□□□□ 0.14
CCDC13-201ENST00000310232 TOPAZ1Q8N9V7 1692 aa15.94■□□□□ 0.14
CCDC13-201ENST00000310232 LRRC37A3O60309 1634 aa15.94■□□□□ 0.14
CCDC13-201ENST00000310232 PIK3C2AO00443 1686 aa15.94■□□□□ 0.14
CCDC13-201ENST00000310232 TPD52L1Q16890 204 aaPredicted RBP15.94■□□□□ 0.14
CCDC13-201ENST00000310232 MAP4K1Q92918 833 aa15.94■□□□□ 0.14
CCDC13-201ENST00000310232 GUCY1B3Q02153 619 aa15.93■□□□□ 0.14
CCDC13-201ENST00000310232 NWD1Q149M9 1564 aa15.93■□□□□ 0.14
CCDC13-201ENST00000310232 FILIP1Q7Z7B0 1213 aa15.93■□□□□ 0.14
CCDC13-201ENST00000310232 BRF1Q92994 677 aa15.93■□□□□ 0.14
CCDC13-201ENST00000310232 ZSCAN31Q96LW9 406 aaPredicted RBP15.93■□□□□ 0.14
CCDC13-201ENST00000310232 TTC41PQ6P2S7 1318 aa15.93■□□□□ 0.14
CCDC13-201ENST00000310232 TTC21AQ8NDW8 1320 aa15.93■□□□□ 0.14
CCDC13-201ENST00000310232 TMEM2Q9UHN6 1383 aa15.93■□□□□ 0.14
CCDC13-201ENST00000310232 A0A0G2JLW4 131 aa15.93■□□□□ 0.14
CCDC13-201ENST00000310232 BTBD11A6QL63 1104 aa15.93■□□□□ 0.14
CCDC13-201ENST00000310232 COL15A1P39059 1388 aa15.93■□□□□ 0.14
CCDC13-201ENST00000310232 PLA2G4DQ86XP0 818 aa15.92■□□□□ 0.14
CCDC13-201ENST00000310232 EVI5LQ96CN4 794 aa15.92■□□□□ 0.14
CCDC13-201ENST00000310232 NPHP4O75161 1426 aaPredicted RBP15.92■□□□□ 0.14
CCDC13-201ENST00000310232 ST7Q9NRC1 585 aa15.91■□□□□ 0.14
CCDC13-201ENST00000310232 HSP90B1P14625 803 aaKnown RBP15.91■□□□□ 0.14
CCDC13-201ENST00000310232 RPS6KB1P23443 525 aa15.91■□□□□ 0.14
CCDC13-201ENST00000310232 EPB41L2O43491 1005 aaKnown RBP15.91■□□□□ 0.14
CCDC13-201ENST00000310232 HTATSF1O43719 755 aaKnown RBP15.91■□□□□ 0.14
CCDC13-201ENST00000310232 TEFQ10587 303 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms