RNA–Protein interactions for RNA: ENST00000307289.10

SYVN1-202, Transcript of synoviolin 1, humanhuman

TSL 1 (best) BASIC

Gene SYVN1, Length 2,841 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-202ENST00000307289 IL17RAQ96F46 866 aa19.83■□□□□ 0.77
SYVN1-202ENST00000307289 JAKMIP1Q96N16 626 aaKnown RBP19.83■□□□□ 0.76
SYVN1-202ENST00000307289 PRIM1P49642 420 aaKnown RBP19.82■□□□□ 0.76
SYVN1-202ENST00000307289 ERC1Q8IUD2 1116 aa19.82■□□□□ 0.76
SYVN1-202ENST00000307289 FMNL2Q96PY5 1086 aa19.82■□□□□ 0.76
SYVN1-202ENST00000307289 GADD45BO75293 160 aaPredicted RBP19.82■□□□□ 0.76
SYVN1-202ENST00000307289 PTMSP20962 102 aa19.82■□□□□ 0.76
SYVN1-202ENST00000307289 TFCP2Q12800 502 aa19.81■□□□□ 0.76
SYVN1-202ENST00000307289 TTLL7Q6ZT98 887 aa19.81■□□□□ 0.76
SYVN1-202ENST00000307289 A0A087WZG4 1122 aa19.81■□□□□ 0.76
SYVN1-202ENST00000307289 A1BGP04217 495 aa19.81■□□□□ 0.76
SYVN1-202ENST00000307289 TOM1L2Q6ZVM7 507 aa19.81■□□□□ 0.76
SYVN1-202ENST00000307289 EVI5LQ96CN4 794 aa19.81■□□□□ 0.76
SYVN1-202ENST00000307289 PRDM11Q9NQV5 511 aa19.81■□□□□ 0.76
SYVN1-202ENST00000307289 ZNF589Q86UQ0 364 aaPredicted RBP19.8■□□□□ 0.76
SYVN1-202ENST00000307289 INTS4Q96HW7 963 aaKnown RBP19.8■□□□□ 0.76
SYVN1-202ENST00000307289 RBSNQ9H1K0 784 aa19.8■□□□□ 0.76
SYVN1-202ENST00000307289 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.8■□□□□ 0.76
SYVN1-202ENST00000307289 SYCE3A1L190 88 aa19.8■□□□□ 0.76
SYVN1-202ENST00000307289 RFX5P48382 616 aaPredicted RBP19.8■□□□□ 0.76
SYVN1-202ENST00000307289 PTPN12Q05209 780 aaKnown RBP19.8■□□□□ 0.76
SYVN1-202ENST00000307289 SLFNL1Q499Z3 407 aa19.8■□□□□ 0.76
SYVN1-202ENST00000307289 GPATCH3Q96I76 525 aa19.8■□□□□ 0.76
SYVN1-202ENST00000307289 RPAP1Q9BWH6 1393 aaPredicted RBP19.8■□□□□ 0.76
SYVN1-202ENST00000307289 NASPP49321 788 aaPredicted RBP19.8■□□□□ 0.76
SYVN1-202ENST00000307289 FSD1Q9BTV5 496 aa19.8■□□□□ 0.76
SYVN1-202ENST00000307289 DBNLQ9UJU6 430 aaKnown RBP19.8■□□□□ 0.76
SYVN1-202ENST00000307289 NECAB1Q8N987 351 aa19.79■□□□□ 0.76
SYVN1-202ENST00000307289 STRN4Q9NRL3 753 aa19.79■□□□□ 0.76
SYVN1-202ENST00000307289 RBM8AQ9Y5S9 174 aaKnown RBP19.79■□□□□ 0.76
SYVN1-202ENST00000307289 CRYBG1Q9Y4K1 1723 aa19.79■□□□□ 0.76
SYVN1-202ENST00000307289 CCDC83Q8IWF9 413 aa19.79■□□□□ 0.76
SYVN1-202ENST00000307289 CHMP3Q9Y3E7 222 aa19.79■□□□□ 0.76
SYVN1-202ENST00000307289 CCDC171Q6TFL3 1326 aa19.78■□□□□ 0.76
SYVN1-202ENST00000307289 ST3GAL1Q11201 340 aa19.78■□□□□ 0.76
SYVN1-202ENST00000307289 NECTIN1Q15223 517 aa19.78■□□□□ 0.76
SYVN1-202ENST00000307289 ZBTB3Q9H5J0 574 aa19.77■□□□□ 0.76
SYVN1-202ENST00000307289 KCNJ4P48050 445 aa19.77■□□□□ 0.76
SYVN1-202ENST00000307289 LMBR1LQ6UX01 489 aa19.77■□□□□ 0.76
SYVN1-202ENST00000307289 SEC62Q99442 399 aaKnown RBP19.77■□□□□ 0.76
SYVN1-202ENST00000307289 LIMCH1Q9UPQ0 1083 aa19.77■□□□□ 0.76
SYVN1-202ENST00000307289 ZNF445P59923 1031 aa19.76■□□□□ 0.75
SYVN1-202ENST00000307289 CREB3L3Q68CJ9 461 aa19.76■□□□□ 0.75
SYVN1-202ENST00000307289 RUFY2Q8WXA3 655 aa19.76■□□□□ 0.75
SYVN1-202ENST00000307289 DBNDD2Q9BQY9 259 aa19.76■□□□□ 0.75
SYVN1-202ENST00000307289 PDRG1Q9NUG6 133 aa19.76■□□□□ 0.75
SYVN1-202ENST00000307289 CCDC129Q6ZRS4 1044 aa19.76■□□□□ 0.75
SYVN1-202ENST00000307289 USP48Q86UV5 1035 aa19.75■□□□□ 0.75
SYVN1-202ENST00000307289 ZCRB1Q8TBF4 217 aaKnown RBP19.75■□□□□ 0.75
SYVN1-202ENST00000307289 ISY1Q9ULR0 285 aaKnown RBP19.75■□□□□ 0.75
SYVN1-202ENST00000307289 ZNF330Q9Y3S2 320 aaPredicted RBP19.75■□□□□ 0.75
SYVN1-202ENST00000307289 SYT1P21579 422 aa19.75■□□□□ 0.75
SYVN1-202ENST00000307289 DNAJC2Q99543 621 aaKnown RBP19.75■□□□□ 0.75
SYVN1-202ENST00000307289 HDAC5Q9UQL6 1122 aa19.75■□□□□ 0.75
SYVN1-202ENST00000307289 CNPY2Q9Y2B0 182 aa19.75■□□□□ 0.75
SYVN1-202ENST00000307289 COL15A1P39059 1388 aa19.75■□□□□ 0.75
SYVN1-202ENST00000307289 CASP7P55210 303 aa19.75■□□□□ 0.75
SYVN1-202ENST00000307289 ME3Q16798 604 aa19.75■□□□□ 0.75
SYVN1-202ENST00000307289 TNNI3KQ59H18 835 aa19.75■□□□□ 0.75
SYVN1-202ENST00000307289 FPGT-TNNI3KV9GXZ4 949 aa19.75■□□□□ 0.75
SYVN1-202ENST00000307289 TCHHQ07283 1943 aa19.74■□□□□ 0.75
SYVN1-202ENST00000307289 MAP4K1Q92918 833 aa19.74■□□□□ 0.75
SYVN1-202ENST00000307289 ZNF594Q96JF6 807 aaPredicted RBP19.74■□□□□ 0.75
SYVN1-202ENST00000307289 SLC27A2O14975 620 aa19.74■□□□□ 0.75
SYVN1-202ENST00000307289 RNF214Q8ND24 703 aa19.74■□□□□ 0.75
SYVN1-202ENST00000307289 ZSWIM6Q9HCJ5 1215 aa19.74■□□□□ 0.75
SYVN1-202ENST00000307289 COPRSQ9NQ92 184 aa19.74■□□□□ 0.75
SYVN1-202ENST00000307289 TPCN1Q9ULQ1 816 aa19.74■□□□□ 0.75
SYVN1-202ENST00000307289 ZNF335Q9H4Z2 1342 aaPredicted RBP19.73■□□□□ 0.75
SYVN1-202ENST00000307289 EPB41L2O43491 1005 aaKnown RBP19.73■□□□□ 0.75
SYVN1-202ENST00000307289 DDX46Q7L014 1031 aaKnown RBP19.73■□□□□ 0.75
SYVN1-202ENST00000307289 PLBD2Q8NHP8 589 aa19.73■□□□□ 0.75
SYVN1-202ENST00000307289 WDR17Q8IZU2 1322 aa19.72■□□□□ 0.75
SYVN1-202ENST00000307289 GJB2P29033 226 aa19.72■□□□□ 0.75
SYVN1-202ENST00000307289 DCCP43146 1447 aa19.72■□□□□ 0.75
SYVN1-202ENST00000307289 FOXO4P98177 505 aa19.72■□□□□ 0.75
SYVN1-202ENST00000307289 CCDC85AQ96PX6 553 aaPredicted RBP19.72■□□□□ 0.75
SYVN1-202ENST00000307289 CYP46A1Q9Y6A2 500 aa19.72■□□□□ 0.75
SYVN1-202ENST00000307289 TIMM10P62072 90 aa19.71■□□□□ 0.75
SYVN1-202ENST00000307289 RABL6Q3YEC7 729 aaPredicted RBP19.71■□□□□ 0.75
SYVN1-202ENST00000307289 SMC3Q9UQE7 1217 aa19.71■□□□□ 0.75
SYVN1-202ENST00000307289 MRC1P22897 1456 aa19.71■□□□□ 0.75
SYVN1-202ENST00000307289 LMTK3Q96Q04 1460 aa19.71■□□□□ 0.75
SYVN1-202ENST00000307289 CPDO75976 1380 aa19.71■□□□□ 0.75
SYVN1-202ENST00000307289 GLI3P10071 1580 aa19.71■□□□□ 0.75
SYVN1-202ENST00000307289 SLAIN2Q9P270 581 aa19.71■□□□□ 0.75
SYVN1-202ENST00000307289 STX6O43752 255 aa19.71■□□□□ 0.74
SYVN1-202ENST00000307289 WDR33Q9C0J8 1336 aaKnown RBP19.7■□□□□ 0.74
SYVN1-202ENST00000307289 ZSCAN22P10073 491 aaPredicted RBP19.7■□□□□ 0.74
SYVN1-202ENST00000307289 LRRC24Q50LG9 513 aa19.7■□□□□ 0.74
SYVN1-202ENST00000307289 VPS53Q5VIR6 699 aa19.7■□□□□ 0.74
SYVN1-202ENST00000307289 KCNB2Q92953 911 aa19.7■□□□□ 0.74
SYVN1-202ENST00000307289 NEUROD6Q96NK8 337 aa19.7■□□□□ 0.74
SYVN1-202ENST00000307289 ESPNB1AK53 854 aa19.69■□□□□ 0.74
SYVN1-202ENST00000307289 STK3Q13188 491 aa19.69■□□□□ 0.74
SYVN1-202ENST00000307289 AFDNP55196 1824 aaKnown RBP19.69■□□□□ 0.74
SYVN1-202ENST00000307289 ZKSCAN1P17029 563 aaPredicted RBP19.69■□□□□ 0.74
SYVN1-202ENST00000307289 TRIM44Q96DX7 344 aaPredicted RBP19.69■□□□□ 0.74
SYVN1-202ENST00000307289 FIBPO43427 364 aa19.68■□□□□ 0.74
SYVN1-202ENST00000307289 TAF5LO75529 589 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms