RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 MPRIPQ6WCQ1 1025 aa17.41■□□□□ 0.38
PTPN9-201ENST00000306726 PI4KAP1Q8N8J0 262 aa17.41■□□□□ 0.38
PTPN9-201ENST00000306726 CABLES1Q8TDN4 633 aa17.41■□□□□ 0.38
PTPN9-201ENST00000306726 STX6O43752 255 aa17.41■□□□□ 0.38
PTPN9-201ENST00000306726 GNAI3P08754 354 aa17.41■□□□□ 0.38
PTPN9-201ENST00000306726 ZRSR1Q15695 479 aaKnown RBP17.41■□□□□ 0.38
PTPN9-201ENST00000306726 SYT1P21579 422 aa17.41■□□□□ 0.38
PTPN9-201ENST00000306726 ISM2Q6H9L7 571 aa17.41■□□□□ 0.38
PTPN9-201ENST00000306726 AACSQ86V21 672 aa17.41■□□□□ 0.38
PTPN9-201ENST00000306726 EDC3Q96F86 508 aaKnown RBP17.41■□□□□ 0.38
PTPN9-201ENST00000306726 CCDC30Q5VVM6 783 aa17.4■□□□□ 0.38
PTPN9-201ENST00000306726 FSD1Q9BTV5 496 aa17.4■□□□□ 0.38
PTPN9-201ENST00000306726 PDRG1Q9NUG6 133 aa17.4■□□□□ 0.38
PTPN9-201ENST00000306726 NBPF7P0C2Y1 421 aaPredicted RBP17.4■□□□□ 0.38
PTPN9-201ENST00000306726 WDR17Q8IZU2 1322 aa17.4■□□□□ 0.38
PTPN9-201ENST00000306726 CCT4P50991 539 aaKnown RBP17.4■□□□□ 0.38
PTPN9-201ENST00000306726 CSB-PGBD3P0DP91 1061 aa17.39■□□□□ 0.37
PTPN9-201ENST00000306726 PTGS1P23219 599 aa17.39■□□□□ 0.37
PTPN9-201ENST00000306726 CCDC85AQ96PX6 553 aaPredicted RBP17.39■□□□□ 0.37
PTPN9-201ENST00000306726 COL5A2P05997 1499 aaPredicted RBP17.39■□□□□ 0.37
PTPN9-201ENST00000306726 HSPA1LP34931 641 aa17.39■□□□□ 0.37
PTPN9-201ENST00000306726 LRMPQ12912 555 aa17.39■□□□□ 0.37
PTPN9-201ENST00000306726 LARGE1O95461 756 aa17.39■□□□□ 0.37
PTPN9-201ENST00000306726 ZKSCAN1P17029 563 aaPredicted RBP17.39■□□□□ 0.37
PTPN9-201ENST00000306726 KIF3AQ9Y496 699 aa17.39■□□□□ 0.37
PTPN9-201ENST00000306726 NAA30Q147X3 362 aaPredicted RBP17.38■□□□□ 0.37
PTPN9-201ENST00000306726 U2AF2P26368 475 aaKnown RBP eCLIP17.38■□□□□ 0.37
PTPN9-201ENST00000306726 TPD52L1Q16890 204 aaPredicted RBP17.38■□□□□ 0.37
PTPN9-201ENST00000306726 FAM177A1Q8N128 213 aaPredicted RBP17.38■□□□□ 0.37
PTPN9-201ENST00000306726 CNTROBQ8N137 903 aa17.38■□□□□ 0.37
PTPN9-201ENST00000306726 CLASRPQ8N2M8 674 aaKnown RBP17.38■□□□□ 0.37
PTPN9-201ENST00000306726 TMX1Q9H3N1 280 aa17.38■□□□□ 0.37
PTPN9-201ENST00000306726 EVA1CP58658 441 aa17.38■□□□□ 0.37
PTPN9-201ENST00000306726 CWF19L2Q2TBE0 894 aaKnown RBP17.37■□□□□ 0.37
PTPN9-201ENST00000306726 ERICH4A6NGS2 130 aa17.37■□□□□ 0.37
PTPN9-201ENST00000306726 BECN2A8MW95 431 aa17.37■□□□□ 0.37
PTPN9-201ENST00000306726 RAB11FIP3O75154 756 aa17.37■□□□□ 0.37
PTPN9-201ENST00000306726 AMOTQ4VCS5 1084 aa17.37■□□□□ 0.37
PTPN9-201ENST00000306726 EYA1Q99502 592 aa17.37■□□□□ 0.37
PTPN9-201ENST00000306726 PLCH1Q4KWH8 1693 aa17.37■□□□□ 0.37
PTPN9-201ENST00000306726 KCNQ3O43525 872 aa17.37■□□□□ 0.37
PTPN9-201ENST00000306726 CCDC186Q7Z3E2 898 aa17.37■□□□□ 0.37
PTPN9-201ENST00000306726 CDCA7Q9BWT1 371 aaPredicted RBP17.37■□□□□ 0.37
PTPN9-201ENST00000306726 CRB1P82279 1406 aa17.36■□□□□ 0.37
PTPN9-201ENST00000306726 FAM184AQ8NB25 1140 aa17.36■□□□□ 0.37
PTPN9-201ENST00000306726 ADCK5Q3MIX3 580 aa17.36■□□□□ 0.37
PTPN9-201ENST00000306726 RHPN1Q8TCX5 695 aa17.36■□□□□ 0.37
PTPN9-201ENST00000306726 NEUROD6Q96NK8 337 aa17.36■□□□□ 0.37
PTPN9-201ENST00000306726 TNMDQ9H2S6 317 aa17.36■□□□□ 0.37
PTPN9-201ENST00000306726 CHST3Q7LGC8 479 aa17.36■□□□□ 0.37
PTPN9-201ENST00000306726 PDCL2Q8N4E4 241 aa17.36■□□□□ 0.37
PTPN9-201ENST00000306726 CARD10Q9BWT7 1032 aa17.36■□□□□ 0.37
PTPN9-201ENST00000306726 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.36■□□□□ 0.37
PTPN9-201ENST00000306726 CHPF2Q9P2E5 772 aa17.36■□□□□ 0.37
PTPN9-201ENST00000306726 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.35■□□□□ 0.37
PTPN9-201ENST00000306726 CCDC183Q5T5S1 534 aa17.35■□□□□ 0.37
PTPN9-201ENST00000306726 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.35■□□□□ 0.371e-6■■□□□ 14.2
PTPN9-201ENST00000306726 PYCARDQ9ULZ3 195 aa17.35■□□□□ 0.37
PTPN9-201ENST00000306726 CYP46A1Q9Y6A2 500 aa17.35■□□□□ 0.37
PTPN9-201ENST00000306726 SLIT2O94813 1529 aa17.35■□□□□ 0.37
PTPN9-201ENST00000306726 GOLGA6L19H0YKK7 550 aa17.35■□□□□ 0.37
PTPN9-201ENST00000306726 BRD1O95696 1058 aa17.35■□□□□ 0.37
PTPN9-201ENST00000306726 NRBP1Q9UHY1 535 aa17.35■□□□□ 0.37
PTPN9-201ENST00000306726 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.35■□□□□ 0.37
PTPN9-201ENST00000306726 ZSCAN22P10073 491 aaPredicted RBP17.34■□□□□ 0.37
PTPN9-201ENST00000306726 HSP90AA4PQ58FG1 418 aa17.34■□□□□ 0.37
PTPN9-201ENST00000306726 THRAP3Q9Y2W1 955 aaKnown RBP17.34■□□□□ 0.37
PTPN9-201ENST00000306726 HTATSF1O43719 755 aaKnown RBP17.34■□□□□ 0.37
PTPN9-201ENST00000306726 CCT2P78371 535 aaKnown RBP17.34■□□□□ 0.37
PTPN9-201ENST00000306726 DACT1Q9NYF0 836 aa17.34■□□□□ 0.37
PTPN9-201ENST00000306726 CHRNA2Q15822 529 aa17.34■□□□□ 0.37
PTPN9-201ENST00000306726 PLEKHO1Q53GL0 409 aaPredicted RBP17.34■□□□□ 0.37
PTPN9-201ENST00000306726 CREBRFQ8IUR6 639 aa17.34■□□□□ 0.37
PTPN9-201ENST00000306726 RAPGEF4Q8WZA2 1011 aa17.34■□□□□ 0.37
PTPN9-201ENST00000306726 FAM227BQ96M60 508 aa17.34■□□□□ 0.37
PTPN9-201ENST00000306726 NLRP2Q9NX02 1062 aa17.34■□□□□ 0.37
PTPN9-201ENST00000306726 CHL1O00533 1208 aa17.33■□□□□ 0.37
PTPN9-201ENST00000306726 PTH1RQ03431 593 aa17.33■□□□□ 0.37
PTPN9-201ENST00000306726 MEX3CQ5U5Q3 659 aaKnown RBP17.33■□□□□ 0.37
PTPN9-201ENST00000306726 CCAR2Q8N163 923 aaKnown RBP17.33■□□□□ 0.37
PTPN9-201ENST00000306726 LIMCH1Q9UPQ0 1083 aa17.33■□□□□ 0.37
PTPN9-201ENST00000306726 PARP4Q9UKK3 1724 aaKnown RBP17.33■□□□□ 0.37
PTPN9-201ENST00000306726 NRAPQ86VF7 1730 aa17.33■□□□□ 0.36
PTPN9-201ENST00000306726 BIN1O00499 593 aa17.33■□□□□ 0.36
PTPN9-201ENST00000306726 TATP17735 454 aaPredicted RBP17.33■□□□□ 0.36
PTPN9-201ENST00000306726 G3BP1Q13283 466 aaKnown RBP eCLIP17.33■□□□□ 0.36
PTPN9-201ENST00000306726 SPATA32Q96LK8 384 aa17.33■□□□□ 0.36
PTPN9-201ENST00000306726 DNAJC25Q9H1X3 360 aa17.32■□□□□ 0.36
PTPN9-201ENST00000306726 ATP6V1DQ9Y5K8 247 aa17.32■□□□□ 0.36
PTPN9-201ENST00000306726 RGPD5Q99666 1765 aa17.32■□□□□ 0.36
PTPN9-201ENST00000306726 PTPN21Q16825 1174 aa17.32■□□□□ 0.36
PTPN9-201ENST00000306726 TOM1L2Q6ZVM7 507 aa17.32■□□□□ 0.36
PTPN9-201ENST00000306726 NUP62CLQ9H1M0 184 aa17.32■□□□□ 0.36
PTPN9-201ENST00000306726 SNX14Q9Y5W7 946 aa17.32■□□□□ 0.36
PTPN9-201ENST00000306726 NUTM2BA6NNL0 878 aaPredicted RBP17.32■□□□□ 0.36
PTPN9-201ENST00000306726 GOLGA6L6A8MZA4 724 aa17.32■□□□□ 0.36
PTPN9-201ENST00000306726 NUTM2EB1AL46 878 aaPredicted RBP17.32■□□□□ 0.36
PTPN9-201ENST00000306726 MCM2P49736 904 aa17.32■□□□□ 0.36
PTPN9-201ENST00000306726 NUTM2AQ8IVF1 878 aaPredicted RBP17.32■□□□□ 0.36
PTPN9-201ENST00000306726 CHMP4CQ96CF2 233 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms