RNA–Protein interactions for RNA: ENST00000306071.6

CHRNB1-201, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB1, Length 2,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-201ENST00000306071 TRERF1Q96PN7 1200 aa22.22■■□□□ 1.15
CHRNB1-201ENST00000306071 LARP1Q6PKG0 1096 aaKnown RBP22.22■■□□□ 1.15
CHRNB1-201ENST00000306071 NUDT16Q96DE0 195 aaKnown RBP22.22■■□□□ 1.15
CHRNB1-201ENST00000306071 DLC1Q96QB1 1528 aa22.21■■□□□ 1.15
CHRNB1-201ENST00000306071 BECN2A8MW95 431 aa22.21■■□□□ 1.15
CHRNB1-201ENST00000306071 HTATSF1O43719 755 aaKnown RBP22.21■■□□□ 1.15
CHRNB1-201ENST00000306071 IQCB1Q15051 598 aa22.21■■□□□ 1.15
CHRNB1-201ENST00000306071 HSP90AB2PQ58FF8 381 aa22.21■■□□□ 1.15
CHRNB1-201ENST00000306071 PGBD1Q96JS3 809 aa22.21■■□□□ 1.15
CHRNB1-201ENST00000306071 ERBB3P21860 1342 aa22.21■■□□□ 1.15
CHRNB1-201ENST00000306071 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.21■■□□□ 1.15
CHRNB1-201ENST00000306071 TULP2O00295 520 aa22.21■■□□□ 1.15
CHRNB1-201ENST00000306071 CCZ1BP86790 482 aa22.21■■□□□ 1.15
CHRNB1-201ENST00000306071 CCZ1P86791 482 aaPredicted RBP22.21■■□□□ 1.15
CHRNB1-201ENST00000306071 MTHFSDQ2M296 383 aaKnown RBP22.21■■□□□ 1.15
CHRNB1-201ENST00000306071 PLCD3Q8N3E9 789 aa22.21■■□□□ 1.15
CHRNB1-201ENST00000306071 GLRX3O76003 335 aaKnown RBP22.2■■□□□ 1.14
CHRNB1-201ENST00000306071 CAPN2P17655 700 aa22.2■■□□□ 1.14
CHRNB1-201ENST00000306071 CYP2C19P33261 490 aa22.2■■□□□ 1.14
CHRNB1-201ENST00000306071 SLC20A2Q08357 652 aa22.2■■□□□ 1.14
CHRNB1-201ENST00000306071 ERCC6LQ2NKX8 1250 aa22.2■■□□□ 1.14
CHRNB1-201ENST00000306071 C11orf57Q6ZUT1 292 aaPredicted RBP22.2■■□□□ 1.14
CHRNB1-201ENST00000306071 NRKQ7Z2Y5 1582 aa22.2■■□□□ 1.14
CHRNB1-201ENST00000306071 TTC21BQ7Z4L5 1316 aa22.2■■□□□ 1.14
CHRNB1-201ENST00000306071 XRN1Q8IZH2 1706 aaKnown RBP22.2■■□□□ 1.14
CHRNB1-201ENST00000306071 KIF2AO00139 706 aaPredicted RBP22.19■■□□□ 1.14
CHRNB1-201ENST00000306071 OS9Q13438 667 aaPredicted RBP22.19■■□□□ 1.14
CHRNB1-201ENST00000306071 POLA2Q14181 598 aa22.19■■□□□ 1.14
CHRNB1-201ENST00000306071 NECTIN1Q15223 517 aa22.19■■□□□ 1.14
CHRNB1-201ENST00000306071 TCEANC2Q96MN5 208 aa22.19■■□□□ 1.14
CHRNB1-201ENST00000306071 RBM8AQ9Y5S9 174 aaKnown RBP22.19■■□□□ 1.14
CHRNB1-201ENST00000306071 HNRNPH2P55795 449 aaKnown RBP22.18■■□□□ 1.14
CHRNB1-201ENST00000306071 CREB3L3Q68CJ9 461 aa22.18■■□□□ 1.14
CHRNB1-201ENST00000306071 STK3Q13188 491 aa22.18■■□□□ 1.14
CHRNB1-201ENST00000306071 SNW1Q13573 536 aaKnown RBP22.18■■□□□ 1.14
CHRNB1-201ENST00000306071 KCNB2Q92953 911 aa22.18■■□□□ 1.14
CHRNB1-201ENST00000306071 H2AFXP16104 143 aaPredicted RBP22.17■■□□□ 1.14
CHRNB1-201ENST00000306071 PSMA5P28066 241 aa22.17■■□□□ 1.14
CHRNB1-201ENST00000306071 STX1AQ16623 288 aa22.17■■□□□ 1.14
CHRNB1-201ENST00000306071 CCDC61Q9Y6R9 512 aa22.17■■□□□ 1.14
CHRNB1-201ENST00000306071 SOX12O15370 315 aa22.17■■□□□ 1.14
CHRNB1-201ENST00000306071 FHOD1Q9Y613 1164 aa22.17■■□□□ 1.14
CHRNB1-201ENST00000306071 MAP3K5Q99683 1374 aa22.17■■□□□ 1.14
CHRNB1-201ENST00000306071 TTC41PQ6P2S7 1318 aa22.16■■□□□ 1.14
CHRNB1-201ENST00000306071 CLCN6P51797 869 aa22.15■■□□□ 1.14
CHRNB1-201ENST00000306071 COL9A3Q14050 684 aaPredicted RBP22.15■■□□□ 1.14
CHRNB1-201ENST00000306071 ANKRD1Q15327 319 aa22.15■■□□□ 1.14
CHRNB1-201ENST00000306071 BLOC1S2Q6QNY1 142 aa22.15■■□□□ 1.14
CHRNB1-201ENST00000306071 TSPYL1Q9H0U9 437 aa22.15■■□□□ 1.14
CHRNB1-201ENST00000306071 ADGRL3Q9HAR2 1447 aa22.15■■□□□ 1.14
CHRNB1-201ENST00000306071 CEBPZQ03701 1054 aaKnown RBP22.14■■□□□ 1.14
CHRNB1-201ENST00000306071 TRIM34Q9BYJ4 488 aa22.14■■□□□ 1.14
CHRNB1-201ENST00000306071 MAP3K19Q56UN5 1328 aa22.14■■□□□ 1.13
CHRNB1-201ENST00000306071 PNMA6AP0CW24 399 aaPredicted RBP22.14■■□□□ 1.13
CHRNB1-201ENST00000306071 HSP90AB4PQ58FF6 505 aa22.14■■□□□ 1.13
CHRNB1-201ENST00000306071 SYTL4Q96C24 671 aaPredicted RBP22.14■■□□□ 1.13
CHRNB1-201ENST00000306071 RAPGEF3O95398 923 aa22.13■■□□□ 1.13
CHRNB1-201ENST00000306071 ARHGAP29Q52LW3 1261 aa22.13■■□□□ 1.13
CHRNB1-201ENST00000306071 SYT10Q6XYQ8 523 aa22.13■■□□□ 1.13
CHRNB1-201ENST00000306071 ZKSCAN7Q9P0L1 754 aaPredicted RBP22.13■■□□□ 1.13
CHRNB1-201ENST00000306071 GSDMDP57764 484 aa22.13■■□□□ 1.13
CHRNB1-201ENST00000306071 TEX35Q5T0J7 233 aa22.13■■□□□ 1.13
CHRNB1-201ENST00000306071 LRRN4CLQ8ND94 238 aa22.13■■□□□ 1.13
CHRNB1-201ENST00000306071 L2HGDHQ9H9P8 463 aa22.13■■□□□ 1.13
CHRNB1-201ENST00000306071 KCND1Q9NSA2 647 aa22.13■■□□□ 1.13
CHRNB1-201ENST00000306071 FAM208AQ9UK61 1670 aaKnown RBP22.12■■□□□ 1.13
CHRNB1-201ENST00000306071 MON2Q7Z3U7 1717 aa22.12■■□□□ 1.13
CHRNB1-201ENST00000306071 SLC27A2O14975 620 aa22.12■■□□□ 1.13
CHRNB1-201ENST00000306071 FBXO31Q5XUX0 539 aaPredicted RBP22.12■■□□□ 1.13
CHRNB1-201ENST00000306071 CLASRPQ8N2M8 674 aaKnown RBP22.12■■□□□ 1.13
CHRNB1-201ENST00000306071 A0A087WWV3 80 aa22.12■■□□□ 1.13
CHRNB1-201ENST00000306071 H3BQV1 296 aa22.12■■□□□ 1.13
CHRNB1-201ENST00000306071 CTAGE5O15320 804 aa22.12■■□□□ 1.13
CHRNB1-201ENST00000306071 IFFO2Q5TF58 517 aa22.12■■□□□ 1.13
CHRNB1-201ENST00000306071 DDX11Q96FC9 970 aa22.12■■□□□ 1.13
CHRNB1-201ENST00000306071 USP42Q9H9J4 1324 aaKnown RBP22.12■■□□□ 1.13
CHRNB1-201ENST00000306071 NBPF7P0C2Y1 421 aaPredicted RBP22.11■■□□□ 1.13
CHRNB1-201ENST00000306071 DHX40Q8IX18 779 aaKnown RBP22.11■■□□□ 1.13
CHRNB1-201ENST00000306071 GPATCH3Q96I76 525 aa22.11■■□□□ 1.13
CHRNB1-201ENST00000306071 PHAXQ9H814 394 aaKnown RBP22.11■■□□□ 1.13
CHRNB1-201ENST00000306071 ECHDC1Q9NTX5 307 aa22.11■■□□□ 1.13
CHRNB1-201ENST00000306071 CFAP45Q9UL16 551 aa22.11■■□□□ 1.13
CHRNB1-201ENST00000306071 POLR3GO15318 223 aaPredicted RBP22.11■■□□□ 1.13
CHRNB1-201ENST00000306071 PLA2G4AP47712 749 aa22.11■■□□□ 1.13
CHRNB1-201ENST00000306071 MAP4K1Q92918 833 aa22.11■■□□□ 1.13
CHRNB1-201ENST00000306071 FBXW7Q969H0 707 aa22.11■■□□□ 1.13
CHRNB1-201ENST00000306071 CHD2O14647 1828 aaKnown RBP22.11■■□□□ 1.13
CHRNB1-201ENST00000306071 PXDNLA1KZ92 1463 aa22.11■■□□□ 1.13
CHRNB1-201ENST00000306071 C3P01024 1663 aa22.11■■□□□ 1.13
CHRNB1-201ENST00000306071 GORABQ5T7V8 394 aa22.1■■□□□ 1.13
CHRNB1-201ENST00000306071 PPP1R13BQ96KQ4 1090 aa22.1■■□□□ 1.13
CHRNB1-201ENST00000306071 FAM227BQ96M60 508 aa22.1■■□□□ 1.13
CHRNB1-201ENST00000306071 RPS6KB1P23443 525 aa22.1■■□□□ 1.13
CHRNB1-201ENST00000306071 RAD51AP2Q09MP3 1159 aa22.1■■□□□ 1.13
CHRNB1-201ENST00000306071 E4F1Q66K89 784 aaPredicted RBP22.1■■□□□ 1.13
CHRNB1-201ENST00000306071 TXNDC2Q86VQ3 553 aa22.1■■□□□ 1.13
CHRNB1-201ENST00000306071 CCAR1Q8IX12 1150 aaKnown RBP22.1■■□□□ 1.13
CHRNB1-201ENST00000306071 AOPEPQ8N6M6 819 aa22.1■■□□□ 1.13
CHRNB1-201ENST00000306071 EVI5LQ96CN4 794 aa22.1■■□□□ 1.13
CHRNB1-201ENST00000306071 ANO10Q9NW15 660 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms