RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 TRMT112Q9UI30 125 aaKnown RBP31.03■■■□□ 2.56
HOXC9-201ENST00000303450 NRXN2Q9P2S2 1712 aa31.03■■■□□ 2.56
HOXC9-201ENST00000303450 IBTKQ9P2D0 1353 aaPredicted RBP31.03■■■□□ 2.56
HOXC9-201ENST00000303450 NTSR2O95665 410 aa31.03■■■□□ 2.56
HOXC9-201ENST00000303450 TRIM27P14373 513 aa31.03■■■□□ 2.56
HOXC9-201ENST00000303450 ST5P78524 1137 aa31.03■■■□□ 2.56
HOXC9-201ENST00000303450 KLHL34Q8N239 644 aa31.03■■■□□ 2.56
HOXC9-201ENST00000303450 SRCIN1Q9C0H9 1055 aa31.03■■■□□ 2.56
HOXC9-201ENST00000303450 NUTM1Q86Y26 1132 aa31.02■■■□□ 2.56
HOXC9-201ENST00000303450 CCDC24Q8N4L8 307 aa31.01■■■□□ 2.55
HOXC9-201ENST00000303450 PXDNLA1KZ92 1463 aa31■■■□□ 2.55
HOXC9-201ENST00000303450 RNF123Q5XPI4 1314 aa31■■■□□ 2.55
HOXC9-201ENST00000303450 ALDH1L1O75891 902 aa30.98■■■□□ 2.55
HOXC9-201ENST00000303450 GCKRQ14397 625 aa30.98■■■□□ 2.55
HOXC9-201ENST00000303450 ERFEQ4G0M1 354 aa30.98■■■□□ 2.55
HOXC9-201ENST00000303450 CLUAP1Q96AJ1 413 aa30.98■■■□□ 2.55
HOXC9-201ENST00000303450 SH3TC1Q8TE82 1336 aa30.98■■■□□ 2.55
HOXC9-201ENST00000303450 SRCAPQ6ZRS2 3230 aa30.98■■■□□ 2.55
HOXC9-201ENST00000303450 C10orf71Q711Q0 1435 aa30.98■■■□□ 2.55
HOXC9-201ENST00000303450 CCT4P50991 539 aaKnown RBP30.98■■■□□ 2.55
HOXC9-201ENST00000303450 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.98■■■□□ 2.55
HOXC9-201ENST00000303450 ZBTB38Q8NAP3 1195 aaPredicted RBP30.98■■■□□ 2.55
HOXC9-201ENST00000303450 FAM89AQ96GI7 184 aa30.98■■■□□ 2.55
HOXC9-201ENST00000303450 RTL5Q5HYW3 569 aaPredicted RBP30.97■■■□□ 2.55
HOXC9-201ENST00000303450 TNNQ9UQP3 1299 aa30.97■■■□□ 2.55
HOXC9-201ENST00000303450 CD2APQ9Y5K6 639 aa30.97■■■□□ 2.55
HOXC9-201ENST00000303450 ABCC4O15439 1325 aa30.97■■■□□ 2.55
HOXC9-201ENST00000303450 FTSJ3Q8IY81 847 aaKnown RBP30.96■■■□□ 2.55
HOXC9-201ENST00000303450 FHDC1Q9C0D6 1143 aaPredicted RBP30.96■■■□□ 2.55
HOXC9-201ENST00000303450 PCCAP05165 728 aaPredicted RBP30.95■■■□□ 2.55
HOXC9-201ENST00000303450 BRIP1Q9BX63 1249 aa30.95■■■□□ 2.55
HOXC9-201ENST00000303450 PLIN1O60240 522 aa30.94■■■□□ 2.54
HOXC9-201ENST00000303450 DZIP1LQ8IYY4 767 aaKnown RBP30.94■■■□□ 2.54
HOXC9-201ENST00000303450 SYNE4Q8N205 404 aa30.94■■■□□ 2.54
HOXC9-201ENST00000303450 ABCC12Q96J65 1359 aa30.93■■■□□ 2.54
HOXC9-201ENST00000303450 KIF13BQ9NQT8 1826 aa30.93■■■□□ 2.54
HOXC9-201ENST00000303450 MS4A1P11836 297 aa30.93■■■□□ 2.54
HOXC9-201ENST00000303450 JARID2Q92833 1246 aaPredicted RBP30.93■■■□□ 2.54
HOXC9-201ENST00000303450 C9orf78Q9NZ63 289 aaPredicted RBP30.93■■■□□ 2.54
HOXC9-201ENST00000303450 PDE6BP35913 854 aa30.92■■■□□ 2.54
HOXC9-201ENST00000303450 INTS3Q68E01 1043 aaKnown RBP30.92■■■□□ 2.54
HOXC9-201ENST00000303450 UBE3BQ7Z3V4 1068 aa30.92■■■□□ 2.54
HOXC9-201ENST00000303450 SLC10A5Q5PT55 438 aa30.91■■■□□ 2.54
HOXC9-201ENST00000303450 N4BP2Q86UW6 1770 aaPredicted RBP30.9■■■□□ 2.54
HOXC9-201ENST00000303450 H7C1W4 665 aa30.9■■■□□ 2.54
HOXC9-201ENST00000303450 GRM8O00222 908 aa30.9■■■□□ 2.54
HOXC9-201ENST00000303450 IRS4O14654 1257 aaPredicted RBP30.9■■■□□ 2.54
HOXC9-201ENST00000303450 HCLS1P14317 486 aaPredicted RBP30.9■■■□□ 2.54
HOXC9-201ENST00000303450 ANKRD31Q8N7Z5 1873 aa30.9■■■□□ 2.54
HOXC9-201ENST00000303450 HSP90B1P14625 803 aaKnown RBP30.89■■■□□ 2.54
HOXC9-201ENST00000303450 TGFB2P61812 414 aa30.89■■■□□ 2.54
HOXC9-201ENST00000303450 SYT17Q9BSW7 474 aa30.89■■■□□ 2.54
HOXC9-201ENST00000303450 TMEM57Q8N5G2 664 aa30.88■■■□□ 2.53
HOXC9-201ENST00000303450 NLRP3Q96P20 1036 aa30.88■■■□□ 2.53
HOXC9-201ENST00000303450 CDHR2Q9BYE9 1310 aa30.88■■■□□ 2.53
HOXC9-201ENST00000303450 RIC1Q4ADV7 1423 aa30.87■■■□□ 2.53
HOXC9-201ENST00000303450 RLBP1P12271 317 aa30.87■■■□□ 2.53
HOXC9-201ENST00000303450 PANK1Q8TE04 598 aa30.87■■■□□ 2.53
HOXC9-201ENST00000303450 RRP1P56182 461 aaKnown RBP30.86■■■□□ 2.53
HOXC9-201ENST00000303450 C2CD5Q86YS7 1000 aa30.86■■■□□ 2.53
HOXC9-201ENST00000303450 PDZRN3Q9UPQ7 1066 aa30.86■■■□□ 2.53
HOXC9-201ENST00000303450 H0YIN7 160 aa30.85■■■□□ 2.53
HOXC9-201ENST00000303450 NLGN2Q8NFZ4 835 aa30.85■■■□□ 2.53
HOXC9-201ENST00000303450 USP44Q9H0E7 712 aa30.85■■■□□ 2.53
HOXC9-201ENST00000303450 A0A0G2JLW4 131 aa30.84■■■□□ 2.53
HOXC9-201ENST00000303450 CHRNA5P30532 468 aa30.84■■■□□ 2.53
HOXC9-201ENST00000303450 CASP7P55210 303 aa30.84■■■□□ 2.53
HOXC9-201ENST00000303450 ITPRIPQ8IWB1 547 aa30.84■■■□□ 2.53
HOXC9-201ENST00000303450 DDX60Q8IY21 1712 aaKnown RBP30.84■■■□□ 2.53
HOXC9-201ENST00000303450 TNRC6CQ9HCJ0 1690 aaKnown RBP30.84■■■□□ 2.53
HOXC9-201ENST00000303450 KLRG2A4D1S0 409 aaPredicted RBP30.83■■■□□ 2.53
HOXC9-201ENST00000303450 PDE8AO60658 829 aa30.83■■■□□ 2.53
HOXC9-201ENST00000303450 NBPF7P0C2Y1 421 aaPredicted RBP30.83■■■□□ 2.53
HOXC9-201ENST00000303450 DPEP1P16444 411 aa30.83■■■□□ 2.53
HOXC9-201ENST00000303450 PDE3AQ14432 1141 aa30.83■■■□□ 2.53
HOXC9-201ENST00000303450 C3orf67Q6ZVT6 689 aa30.83■■■□□ 2.53
HOXC9-201ENST00000303450 UTYO14607 1347 aa30.82■■■□□ 2.52
HOXC9-201ENST00000303450 LAMB2P55268 1798 aa30.82■■■□□ 2.52
HOXC9-201ENST00000303450 CRY2Q49AN0 593 aa30.81■■■□□ 2.52
HOXC9-201ENST00000303450 SRGNP10124 158 aa30.8■■■□□ 2.52
HOXC9-201ENST00000303450 RPGRQ92834 1020 aaKnown RBP30.8■■■□□ 2.52
HOXC9-201ENST00000303450 SUPT16HQ9Y5B9 1047 aaKnown RBP30.8■■■□□ 2.52
HOXC9-201ENST00000303450 KIAA1551Q9HCM1 1747 aa30.79■■■□□ 2.52
HOXC9-201ENST00000303450 C20orf194Q5TEA3 1177 aa30.79■■■□□ 2.52
HOXC9-201ENST00000303450 ZNF622Q969S3 477 aaKnown RBP eCLIP30.79■■■□□ 2.52
HOXC9-201ENST00000303450 PLA2G12BQ9BX93 195 aa30.79■■■□□ 2.52
HOXC9-201ENST00000303450 UBTFL1P0CB47 393 aaPredicted RBP30.78■■■□□ 2.52
HOXC9-201ENST00000303450 NPR1P16066 1061 aa30.78■■■□□ 2.52
HOXC9-201ENST00000303450 MASTLQ96GX5 879 aa30.78■■■□□ 2.52
HOXC9-201ENST00000303450 MEIS3Q99687 375 aa30.78■■■□□ 2.52
HOXC9-201ENST00000303450 COL11A2P13942 1736 aaPredicted RBP30.78■■■□□ 2.52
HOXC9-201ENST00000303450 GNAI3P08754 354 aa30.78■■■□□ 2.52
HOXC9-201ENST00000303450 SF3B3Q15393 1217 aaKnown RBP30.78■■■□□ 2.52
HOXC9-201ENST00000303450 COG6Q9Y2V7 657 aa30.78■■■□□ 2.52
HOXC9-201ENST00000303450 KCNA3P22001 575 aa30.77■■■□□ 2.52
HOXC9-201ENST00000303450 CTSWP56202 376 aa30.77■■■□□ 2.52
HOXC9-201ENST00000303450 SUCLG2Q96I99 432 aa30.77■■■□□ 2.52
HOXC9-201ENST00000303450 HDAC5Q9UQL6 1122 aa30.77■■■□□ 2.52
HOXC9-201ENST00000303450 MYH3P11055 1940 aa30.77■■■□□ 2.52
HOXC9-201ENST00000303450 CENPBP07199 599 aaPredicted RBP30.76■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms