RNA–Protein interactions for RNA: ENST00000301935.9

UBXN1-202, Transcript of UBX domain protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBXN1, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-202ENST00000301935 NBPF26B4DH59 902 aa19.42■□□□□ 0.7
UBXN1-202ENST00000301935 CHADLQ6NUI6 762 aa19.42■□□□□ 0.7
UBXN1-202ENST00000301935 NBPF10Q6P3W6 841 aaKnown RBP19.42■□□□□ 0.7
UBXN1-202ENST00000301935 NBPF15Q8N660 670 aa19.42■□□□□ 0.7
UBXN1-202ENST00000301935 C7orf43Q8WVR3 580 aa19.42■□□□□ 0.7
UBXN1-202ENST00000301935 KLRG2A4D1S0 409 aaPredicted RBP19.41■□□□□ 0.7
UBXN1-202ENST00000301935 POTEIP0CG38 1075 aa19.41■□□□□ 0.7
UBXN1-202ENST00000301935 POTEJP0CG39 1038 aa19.41■□□□□ 0.7
UBXN1-202ENST00000301935 NPR1P16066 1061 aa19.41■□□□□ 0.7
UBXN1-202ENST00000301935 TSR2Q969E8 191 aaKnown RBP19.41■□□□□ 0.7
UBXN1-202ENST00000301935 NIP7Q9Y221 180 aaKnown RBP eCLIP19.41■□□□□ 0.7
UBXN1-202ENST00000301935 IQCA1LA6NCM1 817 aa19.4■□□□□ 0.7
UBXN1-202ENST00000301935 TNS4Q8IZW8 715 aa19.4■□□□□ 0.7
UBXN1-202ENST00000301935 CREBZFQ9NS37 354 aa19.4■□□□□ 0.7
UBXN1-202ENST00000301935 HOXB7P09629 217 aa19.39■□□□□ 0.69
UBXN1-202ENST00000301935 EXOSC9Q06265 439 aaKnown RBP19.39■□□□□ 0.69
UBXN1-202ENST00000301935 TPTE2Q6XPS3 522 aa19.39■□□□□ 0.69
UBXN1-202ENST00000301935 L3MBTL3Q96JM7 780 aaPredicted RBP19.39■□□□□ 0.69
UBXN1-202ENST00000301935 ADAMTSL1Q8N6G6 1762 aa19.39■□□□□ 0.69
UBXN1-202ENST00000301935 NUP98P52948 1817 aa19.39■□□□□ 0.69
UBXN1-202ENST00000301935 FKBP4Q02790 459 aaKnown RBP eCLIP19.38■□□□□ 0.69
UBXN1-202ENST00000301935 MIS18AQ9NYP9 233 aa19.38■□□□□ 0.69
UBXN1-202ENST00000301935 EIF4A1P60842 406 aaKnown RBP19.37■□□□□ 0.69
UBXN1-202ENST00000301935 SNED1Q8TER0 1413 aa19.36■□□□□ 0.69
UBXN1-202ENST00000301935 ZNF541Q9H0D2 1346 aa19.36■□□□□ 0.69
UBXN1-202ENST00000301935 FAM177BA6PVY3 158 aa19.36■□□□□ 0.69
UBXN1-202ENST00000301935 HLFQ16534 295 aa19.36■□□□□ 0.69
UBXN1-202ENST00000301935 OLFM4Q6UX06 510 aa19.36■□□□□ 0.69
UBXN1-202ENST00000301935 LDHDQ86WU2 507 aa19.36■□□□□ 0.69
UBXN1-202ENST00000301935 TAF1DQ9H5J8 278 aaPredicted RBP19.36■□□□□ 0.69
UBXN1-202ENST00000301935 ZNF277Q9NRM2 450 aaPredicted RBP19.36■□□□□ 0.69
UBXN1-202ENST00000301935 PASKQ96RG2 1323 aa19.35■□□□□ 0.69
UBXN1-202ENST00000301935 CAPN15O75808 1086 aa19.35■□□□□ 0.69
UBXN1-202ENST00000301935 TWISTNBQ3B726 338 aaPredicted RBP19.35■□□□□ 0.69
UBXN1-202ENST00000301935 RTKN2Q8IZC4 609 aa19.35■□□□□ 0.69
UBXN1-202ENST00000301935 MKRN1Q9UHC7 482 aaKnown RBP19.35■□□□□ 0.69
UBXN1-202ENST00000301935 RCAN3Q9UKA8 241 aa19.35■□□□□ 0.69
UBXN1-202ENST00000301935 ABCC12Q96J65 1359 aa19.34■□□□□ 0.69
UBXN1-202ENST00000301935 ALDH1B1P30837 517 aa19.34■□□□□ 0.69
UBXN1-202ENST00000301935 CNTNAP1P78357 1384 aa19.33■□□□□ 0.69
UBXN1-202ENST00000301935 VAMP4O75379 141 aa19.33■□□□□ 0.68
UBXN1-202ENST00000301935 ALDH1L2Q3SY69 923 aa19.33■□□□□ 0.68
UBXN1-202ENST00000301935 C8orf58Q8NAV2 365 aa19.33■□□□□ 0.68
UBXN1-202ENST00000301935 RIC1Q4ADV7 1423 aa19.33■□□□□ 0.68
UBXN1-202ENST00000301935 GTF2E1P29083 439 aaPredicted RBP19.32■□□□□ 0.68
UBXN1-202ENST00000301935 IARSP41252 1262 aaKnown RBP19.32■□□□□ 0.68
UBXN1-202ENST00000301935 HACL1Q9UJ83 578 aa19.32■□□□□ 0.68
UBXN1-202ENST00000301935 IBTKQ9P2D0 1353 aaPredicted RBP19.32■□□□□ 0.68
UBXN1-202ENST00000301935 ERVV-1B6SEH8 477 aa19.31■□□□□ 0.68
UBXN1-202ENST00000301935 CRY2Q49AN0 593 aa19.31■□□□□ 0.68
UBXN1-202ENST00000301935 NYXQ9GZU5 481 aa19.31■□□□□ 0.68
UBXN1-202ENST00000301935 COL4A5P29400 1685 aa19.3■□□□□ 0.68
UBXN1-202ENST00000301935 RNF123Q5XPI4 1314 aa19.3■□□□□ 0.68
UBXN1-202ENST00000301935 MAP3K15Q6ZN16 1313 aa19.3■□□□□ 0.68
UBXN1-202ENST00000301935 FZD9O00144 591 aa19.3■□□□□ 0.68
UBXN1-202ENST00000301935 EAPPQ56P03 285 aaPredicted RBP19.3■□□□□ 0.68
UBXN1-202ENST00000301935 NUTM1Q86Y26 1132 aa19.3■□□□□ 0.68
UBXN1-202ENST00000301935 PSMD1Q99460 953 aa19.3■□□□□ 0.68
UBXN1-202ENST00000301935 ITGBL1O95965 494 aaPredicted RBP19.29■□□□□ 0.68
UBXN1-202ENST00000301935 EPHX2P34913 555 aa19.29■□□□□ 0.68
UBXN1-202ENST00000301935 RARSP54136 660 aaKnown RBP19.29■□□□□ 0.68
UBXN1-202ENST00000301935 CCDC30Q5VVM6 783 aa19.29■□□□□ 0.68
UBXN1-202ENST00000301935 KIF6Q6ZMV9 814 aa19.29■□□□□ 0.68
UBXN1-202ENST00000301935 SYNE4Q8N205 404 aa19.29■□□□□ 0.68
UBXN1-202ENST00000301935 TSPYL6Q8N831 410 aa19.29■□□□□ 0.68
UBXN1-202ENST00000301935 LTBP1Q14766 1721 aa19.28■□□□□ 0.68
UBXN1-202ENST00000301935 UBN2Q6ZU65 1347 aa19.28■□□□□ 0.68
UBXN1-202ENST00000301935 ELL2O00472 640 aaPredicted RBP19.28■□□□□ 0.68
UBXN1-202ENST00000301935 BRPF1P55201 1214 aaPredicted RBP19.28■□□□□ 0.68
UBXN1-202ENST00000301935 TTLL7Q6ZT98 887 aa19.28■□□□□ 0.68
UBXN1-202ENST00000301935 GPC2Q8N158 579 aa19.28■□□□□ 0.68
UBXN1-202ENST00000301935 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.28■□□□□ 0.68
UBXN1-202ENST00000301935 TMEM88BA6NKF7 163 aa19.27■□□□□ 0.68
UBXN1-202ENST00000301935 PNMA8AQ86V59 439 aaPredicted RBP19.27■□□□□ 0.68
UBXN1-202ENST00000301935 MYL6BP14649 208 aa19.26■□□□□ 0.67
UBXN1-202ENST00000301935 KRT24Q2M2I5 525 aa19.26■□□□□ 0.67
UBXN1-202ENST00000301935 CC2D2BQ6DHV5 1058 aa19.26■□□□□ 0.67
UBXN1-202ENST00000301935 JDP2Q8WYK2 163 aa19.26■□□□□ 0.67
UBXN1-202ENST00000301935 RPGRQ92834 1020 aaKnown RBP19.26■□□□□ 0.67
UBXN1-202ENST00000301935 STK31Q9BXU1 1019 aa19.26■□□□□ 0.67
UBXN1-202ENST00000301935 CLEC11AQ9Y240 323 aa19.26■□□□□ 0.67
UBXN1-202ENST00000301935 ANKRD36CQ5JPF3 1778 aa19.25■□□□□ 0.67
UBXN1-202ENST00000301935 GPTP24298 496 aa19.25■□□□□ 0.67
UBXN1-202ENST00000301935 HOXA10P31260 410 aaPredicted RBP19.25■□□□□ 0.67
UBXN1-202ENST00000301935 HDGFL1Q5TGJ6 251 aa19.25■□□□□ 0.67
UBXN1-202ENST00000301935 ZBTB3Q9H5J0 574 aa19.25■□□□□ 0.67
UBXN1-202ENST00000301935 ERBB4Q15303 1308 aa19.25■□□□□ 0.67
UBXN1-202ENST00000301935 FOXN1O15353 648 aa19.24■□□□□ 0.67
UBXN1-202ENST00000301935 NTSR2O95665 410 aa19.24■□□□□ 0.67
UBXN1-202ENST00000301935 VEGFBP49765 207 aa19.24■□□□□ 0.67
UBXN1-202ENST00000301935 SUSD4Q5VX71 490 aa19.24■□□□□ 0.67
UBXN1-202ENST00000301935 SMC4Q9NTJ3 1288 aa19.24■□□□□ 0.67
UBXN1-202ENST00000301935 CACNA1FO60840 1977 aa19.24■□□□□ 0.67
UBXN1-202ENST00000301935 KIF16BQ96L93 1317 aa19.24■□□□□ 0.67
UBXN1-202ENST00000301935 IPO8O15397 1037 aaKnown RBP19.23■□□□□ 0.67
UBXN1-202ENST00000301935 EIF6P56537 245 aaKnown RBP19.23■□□□□ 0.67
UBXN1-202ENST00000301935 GRIPAP1Q4V328 841 aa19.23■□□□□ 0.67
UBXN1-202ENST00000301935 MAP1SQ66K74 1059 aaPredicted RBP19.23■□□□□ 0.67
UBXN1-202ENST00000301935 ZNF34Q8IZ26 560 aa19.23■□□□□ 0.67
UBXN1-202ENST00000301935 CNTROBQ8N137 903 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms