RNA–Protein interactions for RNA: ENST00000301717.8

SPSB3-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-201ENST00000301717 MYD88Q99836 296 aa23.41■■□□□ 1.34
SPSB3-201ENST00000301717 ISCA1Q9BUE6 129 aa23.41■■□□□ 1.34
SPSB3-201ENST00000301717 DLEC1Q9Y238 1755 aa23.4■■□□□ 1.34
SPSB3-201ENST00000301717 ARFGEF2Q9Y6D5 1785 aa23.4■■□□□ 1.34
SPSB3-201ENST00000301717 IBTKQ9P2D0 1353 aaPredicted RBP23.4■■□□□ 1.34
SPSB3-201ENST00000301717 ANKRD36CQ5JPF3 1778 aa23.39■■□□□ 1.34
SPSB3-201ENST00000301717 PI4KAP2A4QPH2 592 aa23.39■■□□□ 1.33
SPSB3-201ENST00000301717 RTL5Q5HYW3 569 aaPredicted RBP23.39■■□□□ 1.33
SPSB3-201ENST00000301717 PI4KAP1Q8N8J0 262 aa23.39■■□□□ 1.33
SPSB3-201ENST00000301717 TRMT112Q9UI30 125 aaKnown RBP23.39■■□□□ 1.33
SPSB3-201ENST00000301717 MAP3K2Q9Y2U5 619 aa23.39■■□□□ 1.33
SPSB3-201ENST00000301717 ADCY9O60503 1353 aa23.39■■□□□ 1.33
SPSB3-201ENST00000301717 KLRG2A4D1S0 409 aaPredicted RBP23.38■■□□□ 1.33
SPSB3-201ENST00000301717 HCLS1P14317 486 aaPredicted RBP23.38■■□□□ 1.33
SPSB3-201ENST00000301717 MASTLQ96GX5 879 aa23.38■■□□□ 1.33
SPSB3-201ENST00000301717 CHMP4AQ9BY43 222 aa23.38■■□□□ 1.33
SPSB3-201ENST00000301717 FLIIQ13045 1269 aa23.37■■□□□ 1.33
SPSB3-201ENST00000301717 SLC51AQ86UW1 340 aa23.37■■□□□ 1.33
SPSB3-201ENST00000301717 C21orf2O43822 256 aa23.36■■□□□ 1.33
SPSB3-201ENST00000301717 HNRNPUQ00839 825 aaKnown RBP eCLIP23.36■■□□□ 1.33
SPSB3-201ENST00000301717 STYK1Q6J9G0 422 aa23.36■■□□□ 1.33
SPSB3-201ENST00000301717 PRPF40BQ6NWY9 871 aaKnown RBP23.36■■□□□ 1.33
SPSB3-201ENST00000301717 JARID2Q92833 1246 aaPredicted RBP23.36■■□□□ 1.33
SPSB3-201ENST00000301717 FAM89AQ96GI7 184 aa23.36■■□□□ 1.33
SPSB3-201ENST00000301717 DDX58O95786 925 aaKnown RBP23.35■■□□□ 1.33
SPSB3-201ENST00000301717 RASSF7Q02833 373 aa23.35■■□□□ 1.33
SPSB3-201ENST00000301717 OLFM4Q6UX06 510 aa23.35■■□□□ 1.33
SPSB3-201ENST00000301717 KSR2Q6VAB6 950 aa23.35■■□□□ 1.33
SPSB3-201ENST00000301717 PDZRN3Q9UPQ7 1066 aa23.35■■□□□ 1.33
SPSB3-201ENST00000301717 NPR1P16066 1061 aa23.34■■□□□ 1.33
SPSB3-201ENST00000301717 CRY2Q49AN0 593 aa23.34■■□□□ 1.33
SPSB3-201ENST00000301717 TRMT2AQ8IZ69 625 aaKnown RBP23.34■■□□□ 1.33
SPSB3-201ENST00000301717 METTL22Q9BUU2 404 aaPredicted RBP23.34■■□□□ 1.33
SPSB3-201ENST00000301717 ARFGEF1Q9Y6D6 1849 aa23.34■■□□□ 1.33
SPSB3-201ENST00000301717 FKBP5Q13451 457 aaPredicted RBP23.33■■□□□ 1.33
SPSB3-201ENST00000301717 SH3TC1Q8TE82 1336 aa23.33■■□□□ 1.33
SPSB3-201ENST00000301717 SLX4Q8IY92 1834 aa23.33■■□□□ 1.33
SPSB3-201ENST00000301717 IGKV5-2P06315 115 aa23.33■■□□□ 1.32
SPSB3-201ENST00000301717 CNKSR1Q969H4 720 aa23.33■■□□□ 1.32
SPSB3-201ENST00000301717 CHD4Q14839 1912 aa23.33■■□□□ 1.32
SPSB3-201ENST00000301717 RIC1Q4ADV7 1423 aa23.32■■□□□ 1.32
SPSB3-201ENST00000301717 F6X3S4 739 aa23.32■■□□□ 1.32
SPSB3-201ENST00000301717 PRELPP51888 382 aa23.32■■□□□ 1.32
SPSB3-201ENST00000301717 TRIM28Q13263 835 aaKnown RBP23.32■■□□□ 1.32
SPSB3-201ENST00000301717 CWF19L2Q2TBE0 894 aaKnown RBP23.32■■□□□ 1.32
SPSB3-201ENST00000301717 SLC10A5Q5PT55 438 aa23.32■■□□□ 1.32
SPSB3-201ENST00000301717 BCL2L13Q9BXK5 485 aa23.32■■□□□ 1.32
SPSB3-201ENST00000301717 CACNA1SQ13698 1873 aa23.31■■□□□ 1.32
SPSB3-201ENST00000301717 NFKBIEO00221 500 aa23.3■■□□□ 1.32
SPSB3-201ENST00000301717 RPGRQ92834 1020 aaKnown RBP23.3■■□□□ 1.32
SPSB3-201ENST00000301717 NLRP3Q96P20 1036 aa23.3■■□□□ 1.32
SPSB3-201ENST00000301717 RNF123Q5XPI4 1314 aa23.3■■□□□ 1.32
SPSB3-201ENST00000301717 C7orf43Q8WVR3 580 aa23.29■■□□□ 1.32
SPSB3-201ENST00000301717 CWC25Q9NXE8 425 aaPredicted RBP23.29■■□□□ 1.32
SPSB3-201ENST00000301717 MRPL50Q8N5N7 158 aaKnown RBP23.28■■□□□ 1.32
SPSB3-201ENST00000301717 ZNF784Q8NCA9 323 aaPredicted RBP23.28■■□□□ 1.32
SPSB3-201ENST00000301717 CCDC191Q8NCU4 936 aa23.28■■□□□ 1.32
SPSB3-201ENST00000301717 DNAAF4Q8WXU2 420 aa23.28■■□□□ 1.32
SPSB3-201ENST00000301717 SSH1Q8WYL5 1049 aa23.28■■□□□ 1.32
SPSB3-201ENST00000301717 IRS4O14654 1257 aaPredicted RBP23.27■■□□□ 1.32
SPSB3-201ENST00000301717 C9orf131Q5VYM1 1079 aa23.27■■□□□ 1.32
SPSB3-201ENST00000301717 NEURL1BA8MQ27 555 aa23.26■■□□□ 1.31
SPSB3-201ENST00000301717 HOXA10P31260 410 aaPredicted RBP23.26■■□□□ 1.31
SPSB3-201ENST00000301717 ZBTB38Q8NAP3 1195 aaPredicted RBP23.26■■□□□ 1.31
SPSB3-201ENST00000301717 NEXNQ0ZGT2 675 aa23.25■■□□□ 1.31
SPSB3-201ENST00000301717 RBM17Q96I25 401 aaKnown RBP23.25■■□□□ 1.31
SPSB3-201ENST00000301717 DDX60Q8IY21 1712 aaKnown RBP23.25■■□□□ 1.31
SPSB3-201ENST00000301717 LAMB2P55268 1798 aa23.25■■□□□ 1.31
SPSB3-201ENST00000301717 ABCC4O15439 1325 aa23.25■■□□□ 1.31
SPSB3-201ENST00000301717 ALDH1B1P30837 517 aa23.25■■□□□ 1.31
SPSB3-201ENST00000301717 ZNF526Q8TF50 670 aaPredicted RBP23.25■■□□□ 1.31
SPSB3-201ENST00000301717 RNF181Q9P0P0 153 aa23.25■■□□□ 1.31
SPSB3-201ENST00000301717 PCCAP05165 728 aaPredicted RBP23.24■■□□□ 1.31
SPSB3-201ENST00000301717 COL4A1P02462 1669 aa23.23■■□□□ 1.31
SPSB3-201ENST00000301717 CCDC85AQ96PX6 553 aaPredicted RBP23.23■■□□□ 1.31
SPSB3-201ENST00000301717 CRAMP1Q96RY5 1269 aa23.23■■□□□ 1.31
SPSB3-201ENST00000301717 PPEF1O14829 653 aaPredicted RBP23.21■■□□□ 1.31
SPSB3-201ENST00000301717 GCKRQ14397 625 aa23.21■■□□□ 1.31
SPSB3-201ENST00000301717 CCDC93Q567U6 631 aa23.21■■□□□ 1.31
SPSB3-201ENST00000301717 SLC4A10Q6U841 1118 aa23.21■■□□□ 1.31
SPSB3-201ENST00000301717 SMC4Q9NTJ3 1288 aa23.21■■□□□ 1.31
SPSB3-201ENST00000301717 BEND3Q5T5X7 828 aa23.2■■□□□ 1.3
SPSB3-201ENST00000301717 UBE3BQ7Z3V4 1068 aa23.2■■□□□ 1.3
SPSB3-201ENST00000301717 LINS1Q8NG48 757 aa23.2■■□□□ 1.3
SPSB3-201ENST00000301717 SF3B3Q15393 1217 aaKnown RBP23.19■■□□□ 1.3
SPSB3-201ENST00000301717 DDX46Q7L014 1031 aaKnown RBP23.19■■□□□ 1.3
SPSB3-201ENST00000301717 TAOK3Q9H2K8 898 aa23.19■■□□□ 1.3
SPSB3-201ENST00000301717 SNED1Q8TER0 1413 aa23.18■■□□□ 1.3
SPSB3-201ENST00000301717 LMNB1P20700 586 aa23.18■■□□□ 1.3
SPSB3-201ENST00000301717 CELF1Q92879 486 aaKnown RBP23.18■■□□□ 1.3
SPSB3-201ENST00000301717 SEC31BQ9NQW1 1179 aa23.18■■□□□ 1.3
SPSB3-201ENST00000301717 TAF1P21675 1872 aa23.18■■□□□ 1.3
SPSB3-201ENST00000301717 CACNA1FO60840 1977 aa23.18■■□□□ 1.3
SPSB3-201ENST00000301717 FER1L6Q2WGJ9 1857 aa23.17■■□□□ 1.3
SPSB3-201ENST00000301717 H7C1W4 665 aa23.17■■□□□ 1.3
SPSB3-201ENST00000301717 GRAPQ13588 217 aa23.17■■□□□ 1.3
SPSB3-201ENST00000301717 GRAPLQ8TC17 118 aaPredicted RBP23.17■■□□□ 1.3
SPSB3-201ENST00000301717 ZNF277Q9NRM2 450 aaPredicted RBP23.17■■□□□ 1.3
SPSB3-201ENST00000301717 ZBED9Q6R2W3 1325 aa23.17■■□□□ 1.3
SPSB3-201ENST00000301717 PDE8AO60658 829 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms