RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 CCDC61Q9Y6R9 512 aa15.36■□□□□ 0.05
TVP23A-201ENST00000299866 ERCC6LQ2NKX8 1250 aa15.35■□□□□ 0.05
TVP23A-201ENST00000299866 ZNF446Q9NWS9 450 aa15.35■□□□□ 0.05
TVP23A-201ENST00000299866 CREB3L3Q68CJ9 461 aa15.35■□□□□ 0.05
TVP23A-201ENST00000299866 NYAP1Q6ZVC0 841 aa15.35■□□□□ 0.05
TVP23A-201ENST00000299866 MAP3K19Q56UN5 1328 aa15.35■□□□□ 0.05
TVP23A-201ENST00000299866 FOSBP53539 338 aa15.35■□□□□ 0.05
TVP23A-201ENST00000299866 GLRX3O76003 335 aaKnown RBP15.34■□□□□ 0.05
TVP23A-201ENST00000299866 NBPF7P0C2Y1 421 aaPredicted RBP15.34■□□□□ 0.05
TVP23A-201ENST00000299866 TM6SF1Q9BZW5 370 aa15.34■□□□□ 0.05
TVP23A-201ENST00000299866 TUBGCP6Q96RT7 1819 aa15.34■□□□□ 0.05
TVP23A-201ENST00000299866 ALKQ9UM73 1620 aa15.34■□□□□ 0.05
TVP23A-201ENST00000299866 IQCB1Q15051 598 aa15.33■□□□□ 0.05
TVP23A-201ENST00000299866 GORABQ5T7V8 394 aa15.33■□□□□ 0.05
TVP23A-201ENST00000299866 RBM43Q6ZSC3 357 aaKnown RBP15.33■□□□□ 0.05
TVP23A-201ENST00000299866 CCAR2Q8N163 923 aaKnown RBP15.33■□□□□ 0.05
TVP23A-201ENST00000299866 CDC25BP30305 580 aa15.33■□□□□ 0.04
TVP23A-201ENST00000299866 NECTIN1Q15223 517 aa15.33■□□□□ 0.04
TVP23A-201ENST00000299866 LRRN4CLQ8ND94 238 aa15.33■□□□□ 0.04
TVP23A-201ENST00000299866 ERCC4Q92889 916 aaPredicted RBP15.33■□□□□ 0.04
TVP23A-201ENST00000299866 FAM227BQ96M60 508 aa15.33■□□□□ 0.04
TVP23A-201ENST00000299866 EIF2S2P20042 333 aaKnown RBP15.33■□□□□ 0.04
TVP23A-201ENST00000299866 BLOC1S2Q6QNY1 142 aa15.33■□□□□ 0.04
TVP23A-201ENST00000299866 NEMFO60524 1076 aa15.32■□□□□ 0.04
TVP23A-201ENST00000299866 JAK2O60674 1132 aa15.32■□□□□ 0.04
TVP23A-201ENST00000299866 CCZ1BP86790 482 aa15.32■□□□□ 0.04
TVP23A-201ENST00000299866 CCZ1P86791 482 aaPredicted RBP15.32■□□□□ 0.04
TVP23A-201ENST00000299866 POLA2Q14181 598 aa15.32■□□□□ 0.04
TVP23A-201ENST00000299866 BMS1Q14692 1282 aaKnown RBP15.32■□□□□ 0.04
TVP23A-201ENST00000299866 MYO5BQ9ULV0 1848 aa15.32■□□□□ 0.04
TVP23A-201ENST00000299866 FAM53CQ9NYF3 392 aa15.32■□□□□ 0.04
TVP23A-201ENST00000299866 TAF6LQ9Y6J9 622 aa15.32■□□□□ 0.04
TVP23A-201ENST00000299866 ERBB3P21860 1342 aa15.32■□□□□ 0.04
TVP23A-201ENST00000299866 CAPN2P17655 700 aa15.32■□□□□ 0.04
TVP23A-201ENST00000299866 MLH3Q9UHC1 1453 aa15.31■□□□□ 0.04
TVP23A-201ENST00000299866 POLR3GO15318 223 aaPredicted RBP15.31■□□□□ 0.04
TVP23A-201ENST00000299866 HNRNPH2P55795 449 aaKnown RBP15.31■□□□□ 0.04
TVP23A-201ENST00000299866 SNW1Q13573 536 aaKnown RBP15.31■□□□□ 0.04
TVP23A-201ENST00000299866 HDGFL1Q5TGJ6 251 aa15.31■□□□□ 0.04
TVP23A-201ENST00000299866 SYT10Q6XYQ8 523 aa15.31■□□□□ 0.04
TVP23A-201ENST00000299866 CLASRPQ8N2M8 674 aaKnown RBP15.31■□□□□ 0.04
TVP23A-201ENST00000299866 MRFAP1L1Q96HT8 127 aa15.31■□□□□ 0.04
TVP23A-201ENST00000299866 H3BQV1 296 aa15.31■□□□□ 0.04
TVP23A-201ENST00000299866 SLC27A2O14975 620 aa15.31■□□□□ 0.04
TVP23A-201ENST00000299866 IFFO2Q5TF58 517 aa15.31■□□□□ 0.04
TVP23A-201ENST00000299866 PSMA5P28066 241 aa15.3■□□□□ 0.04
TVP23A-201ENST00000299866 IFIT2P09913 472 aaKnown RBP15.3■□□□□ 0.04
TVP23A-201ENST00000299866 IPO4Q8TEX9 1081 aaKnown RBP15.3■□□□□ 0.04
TVP23A-201ENST00000299866 BRF1Q92994 677 aa15.3■□□□□ 0.04
TVP23A-201ENST00000299866 NMIQ13287 307 aaPredicted RBP15.3■□□□□ 0.04
TVP23A-201ENST00000299866 STX1AQ16623 288 aa15.3■□□□□ 0.04
TVP23A-201ENST00000299866 SARM1Q6SZW1 724 aa15.3■□□□□ 0.04
TVP23A-201ENST00000299866 ECHDC1Q9NTX5 307 aa15.3■□□□□ 0.04
TVP23A-201ENST00000299866 ARHGEF10O15013 1369 aa15.29■□□□□ 0.04
TVP23A-201ENST00000299866 HTATSF1O43719 755 aaKnown RBP15.29■□□□□ 0.04
TVP23A-201ENST00000299866 NPM1P06748 294 aaKnown RBP eCLIP15.29■□□□□ 0.04
TVP23A-201ENST00000299866 CLCN6P51797 869 aa15.29■□□□□ 0.04
TVP23A-201ENST00000299866 TAF7Q15545 349 aaPredicted RBP15.29■□□□□ 0.04
TVP23A-201ENST00000299866 AOPEPQ8N6M6 819 aa15.29■□□□□ 0.04
TVP23A-201ENST00000299866 DNAJC2Q99543 621 aaKnown RBP15.29■□□□□ 0.04
TVP23A-201ENST00000299866 FTOQ9C0B1 505 aaKnown RBP eCLIP15.29■□□□□ 0.04
TVP23A-201ENST00000299866 PA2G4Q9UQ80 394 aaKnown RBP15.29■□□□□ 0.04
TVP23A-201ENST00000299866 SLFNL1Q499Z3 407 aa15.29■□□□□ 0.04
TVP23A-201ENST00000299866 ARHGAP29Q52LW3 1261 aa15.29■□□□□ 0.04
TVP23A-201ENST00000299866 CCAR1Q8IX12 1150 aaKnown RBP15.29■□□□□ 0.04
TVP23A-201ENST00000299866 TRIM34Q9BYJ4 488 aa15.29■□□□□ 0.04
TVP23A-201ENST00000299866 TTC21BQ7Z4L5 1316 aa15.28■□□□□ 0.04
TVP23A-201ENST00000299866 CYP2C19P33261 490 aa15.28■□□□□ 0.04
TVP23A-201ENST00000299866 TTC41PQ6P2S7 1318 aa15.28■□□□□ 0.04
TVP23A-201ENST00000299866 CAVIN2O95810 425 aa15.28■□□□□ 0.04
TVP23A-201ENST00000299866 TOB2Q14106 344 aaPredicted RBP15.28■□□□□ 0.04
TVP23A-201ENST00000299866 FHOD1Q9Y613 1164 aa15.28■□□□□ 0.04
TVP23A-201ENST00000299866 ANXA1P04083 346 aa15.27■□□□□ 0.04
TVP23A-201ENST00000299866 HSP90B1P14625 803 aaKnown RBP15.27■□□□□ 0.04
TVP23A-201ENST00000299866 HSP90AB4PQ58FF6 505 aa15.27■□□□□ 0.04
TVP23A-201ENST00000299866 AACSQ86V21 672 aa15.27■□□□□ 0.04
TVP23A-201ENST00000299866 NEK11Q8NG66 645 aa15.27■□□□□ 0.04
TVP23A-201ENST00000299866 KCNB2Q92953 911 aa15.27■□□□□ 0.04
TVP23A-201ENST00000299866 PPFIA3O75145 1194 aa15.27■□□□□ 0.04
TVP23A-201ENST00000299866 PNMA6AP0CW24 399 aaPredicted RBP15.27■□□□□ 0.04
TVP23A-201ENST00000299866 PDIA4P13667 645 aaKnown RBP15.27■□□□□ 0.04
TVP23A-201ENST00000299866 RPS6KB1P23443 525 aa15.27■□□□□ 0.04
TVP23A-201ENST00000299866 ANKRD1Q15327 319 aa15.27■□□□□ 0.04
TVP23A-201ENST00000299866 HOMER1Q86YM7 354 aa15.27■□□□□ 0.04
TVP23A-201ENST00000299866 MAP4K1Q92918 833 aa15.27■□□□□ 0.04
TVP23A-201ENST00000299866 GPATCH3Q96I76 525 aa15.27■□□□□ 0.04
TVP23A-201ENST00000299866 MAP3K5Q99683 1374 aa15.27■□□□□ 0.03
TVP23A-201ENST00000299866 H2AFXP16104 143 aaPredicted RBP15.27■□□□□ 0.03
TVP23A-201ENST00000299866 RESTQ13127 1097 aa15.27■□□□□ 0.03
TVP23A-201ENST00000299866 RNF20Q5VTR2 975 aa15.27■□□□□ 0.03
TVP23A-201ENST00000299866 DHX40Q8IX18 779 aaKnown RBP15.27■□□□□ 0.03
TVP23A-201ENST00000299866 EVI5LQ96CN4 794 aa15.27■□□□□ 0.03
TVP23A-201ENST00000299866 CHMP4AQ9BY43 222 aa15.27■□□□□ 0.03
TVP23A-201ENST00000299866 PRR36Q9H6K5 1346 aa15.26■□□□□ 0.03
TVP23A-201ENST00000299866 SMC2O95347 1197 aa15.26■□□□□ 0.03
TVP23A-201ENST00000299866 PLA2G4AP47712 749 aa15.26■□□□□ 0.03
TVP23A-201ENST00000299866 GOLPH3LQ9H4A5 285 aa15.26■□□□□ 0.03
TVP23A-201ENST00000299866 PREX1Q8TCU6 1659 aa15.26■□□□□ 0.03
TVP23A-201ENST00000299866 PI4KAP2A4QPH2 592 aa15.26■□□□□ 0.03
TVP23A-201ENST00000299866 E4F1Q66K89 784 aaPredicted RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms