RNA–Protein interactions for RNA: ENST00000297537.4

GBX1-201, Transcript of gastrulation brain homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GBX1, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBX1-201ENST00000297537 SLC10A5Q5PT55 438 aa30.03■■■□□ 2.4
GBX1-201ENST00000297537 KSR2Q6VAB6 950 aa30.03■■■□□ 2.4
GBX1-201ENST00000297537 TTLL6Q8N841 843 aa30.03■■■□□ 2.4
GBX1-201ENST00000297537 RNF123Q5XPI4 1314 aa30.02■■■□□ 2.4
GBX1-201ENST00000297537 ARFGEF2Q9Y6D5 1785 aa30.01■■■□□ 2.39
GBX1-201ENST00000297537 PI4KAP2A4QPH2 592 aa30.01■■■□□ 2.39
GBX1-201ENST00000297537 ATP5J2-PTCD1G3V325 749 aa30.01■■■□□ 2.39
GBX1-201ENST00000297537 STYK1Q6J9G0 422 aa30.01■■■□□ 2.39
GBX1-201ENST00000297537 PI4KAP1Q8N8J0 262 aa30.01■■■□□ 2.39
GBX1-201ENST00000297537 MASTLQ96GX5 879 aa30.01■■■□□ 2.39
GBX1-201ENST00000297537 METTL22Q9BUU2 404 aaPredicted RBP30.01■■■□□ 2.39
GBX1-201ENST00000297537 COL11A2P13942 1736 aaPredicted RBP30.01■■■□□ 2.39
GBX1-201ENST00000297537 FLIIQ13045 1269 aa30■■■□□ 2.39
GBX1-201ENST00000297537 CRY2Q49AN0 593 aa30■■■□□ 2.39
GBX1-201ENST00000297537 ADCY9O60503 1353 aa30■■■□□ 2.39
GBX1-201ENST00000297537 CACNA1FO60840 1977 aa29.99■■■□□ 2.39
GBX1-201ENST00000297537 ZNF622Q969S3 477 aaKnown RBP eCLIP29.99■■■□□ 2.39
GBX1-201ENST00000297537 MAP3K2Q9Y2U5 619 aa29.99■■■□□ 2.39
GBX1-201ENST00000297537 ARFGEF1Q9Y6D6 1849 aa29.99■■■□□ 2.39
GBX1-201ENST00000297537 NPR1P16066 1061 aa29.98■■■□□ 2.39
GBX1-201ENST00000297537 MYD88Q99836 296 aa29.98■■■□□ 2.39
GBX1-201ENST00000297537 TRMT112Q9UI30 125 aaKnown RBP29.98■■■□□ 2.39
GBX1-201ENST00000297537 HNRNPUQ00839 825 aaKnown RBP eCLIP29.97■■■□□ 2.39
GBX1-201ENST00000297537 SYNE4Q8N205 404 aa29.97■■■□□ 2.39
GBX1-201ENST00000297537 CNKSR1Q969H4 720 aa29.97■■■□□ 2.39
GBX1-201ENST00000297537 CHD4Q14839 1912 aa29.96■■■□□ 2.39
GBX1-201ENST00000297537 TNRC6CQ9HCJ0 1690 aaKnown RBP29.96■■■□□ 2.39
GBX1-201ENST00000297537 SH3TC1Q8TE82 1336 aa29.96■■■□□ 2.39
GBX1-201ENST00000297537 YY1P25490 414 aa29.94■■■□□ 2.38
GBX1-201ENST00000297537 C3orf67Q6ZVT6 689 aa29.94■■■□□ 2.38
GBX1-201ENST00000297537 CCDC191Q8NCU4 936 aa29.94■■■□□ 2.38
GBX1-201ENST00000297537 ZNF428Q96B54 188 aa29.94■■■□□ 2.38
GBX1-201ENST00000297537 IGKV5-2P06315 115 aa29.93■■■□□ 2.38
GBX1-201ENST00000297537 FKBP5Q13451 457 aaPredicted RBP29.93■■■□□ 2.38
GBX1-201ENST00000297537 NLRP3Q96P20 1036 aa29.93■■■□□ 2.38
GBX1-201ENST00000297537 HOXA10P31260 410 aaPredicted RBP29.92■■■□□ 2.38
GBX1-201ENST00000297537 ARHGAP27Q6ZUM4 889 aa29.92■■■□□ 2.38
GBX1-201ENST00000297537 FAM89AQ96GI7 184 aa29.92■■■□□ 2.38
GBX1-201ENST00000297537 HCLS1P14317 486 aaPredicted RBP29.91■■■□□ 2.38
GBX1-201ENST00000297537 PRPF40BQ6NWY9 871 aaKnown RBP29.91■■■□□ 2.38
GBX1-201ENST00000297537 CT47B1P0C2W7 299 aaPredicted RBP29.9■■■□□ 2.38
GBX1-201ENST00000297537 ALDH1B1P30837 517 aa29.9■■■□□ 2.38
GBX1-201ENST00000297537 MRPL50Q8N5N7 158 aaKnown RBP29.9■■■□□ 2.38
GBX1-201ENST00000297537 ZBTB38Q8NAP3 1195 aaPredicted RBP29.9■■■□□ 2.38
GBX1-201ENST00000297537 C7orf43Q8WVR3 580 aa29.9■■■□□ 2.38
GBX1-201ENST00000297537 CWC25Q9NXE8 425 aaPredicted RBP29.9■■■□□ 2.38
GBX1-201ENST00000297537 DNAAF4Q8WXU2 420 aa29.89■■■□□ 2.38
GBX1-201ENST00000297537 SLX4Q8IY92 1834 aa29.89■■■□□ 2.38
GBX1-201ENST00000297537 NEXNQ0ZGT2 675 aa29.88■■■□□ 2.37
GBX1-201ENST00000297537 SSH1Q8WYL5 1049 aa29.88■■■□□ 2.37
GBX1-201ENST00000297537 C21orf2O43822 256 aa29.87■■■□□ 2.37
GBX1-201ENST00000297537 PCCAP05165 728 aaPredicted RBP29.87■■■□□ 2.37
GBX1-201ENST00000297537 ALDH1L2Q3SY69 923 aa29.87■■■□□ 2.37
GBX1-201ENST00000297537 NEURL1BA8MQ27 555 aa29.86■■■□□ 2.37
GBX1-201ENST00000297537 CWF19L2Q2TBE0 894 aaKnown RBP29.86■■■□□ 2.37
GBX1-201ENST00000297537 RPGRQ92834 1020 aaKnown RBP29.86■■■□□ 2.37
GBX1-201ENST00000297537 CRAMP1Q96RY5 1269 aa29.86■■■□□ 2.37
GBX1-201ENST00000297537 RTL5Q5HYW3 569 aaPredicted RBP29.85■■■□□ 2.37
GBX1-201ENST00000297537 RBM17Q96I25 401 aaKnown RBP29.85■■■□□ 2.37
GBX1-201ENST00000297537 ZBED9Q6R2W3 1325 aa29.85■■■□□ 2.37
GBX1-201ENST00000297537 F6X3S4 739 aa29.84■■■□□ 2.37
GBX1-201ENST00000297537 IRS4O14654 1257 aaPredicted RBP29.84■■■□□ 2.37
GBX1-201ENST00000297537 LINS1Q8NG48 757 aa29.84■■■□□ 2.37
GBX1-201ENST00000297537 DDX60Q8IY21 1712 aaKnown RBP29.83■■■□□ 2.37
GBX1-201ENST00000297537 SF3B3Q15393 1217 aaKnown RBP29.83■■■□□ 2.37
GBX1-201ENST00000297537 ZNF219Q9P2Y4 722 aaPredicted RBP29.83■■■□□ 2.37
GBX1-201ENST00000297537 NFKBIEO00221 500 aa29.82■■■□□ 2.36
GBX1-201ENST00000297537 BEND3Q5T5X7 828 aa29.81■■■□□ 2.36
GBX1-201ENST00000297537 SOGA3Q5TF21 947 aa29.81■■■□□ 2.36
GBX1-201ENST00000297537 LAMB2P55268 1798 aa29.81■■■□□ 2.36
GBX1-201ENST00000297537 CDHR2Q9BYE9 1310 aa29.8■■■□□ 2.36
GBX1-201ENST00000297537 H7C1W4 665 aa29.8■■■□□ 2.36
GBX1-201ENST00000297537 GCKRQ14397 625 aa29.8■■■□□ 2.36
GBX1-201ENST00000297537 JARID2Q92833 1246 aaPredicted RBP29.8■■■□□ 2.36
GBX1-201ENST00000297537 CACNA1SQ13698 1873 aa29.79■■■□□ 2.36
GBX1-201ENST00000297537 HSP90B1P14625 803 aaKnown RBP29.79■■■□□ 2.36
GBX1-201ENST00000297537 PRELPP51888 382 aa29.79■■■□□ 2.36
GBX1-201ENST00000297537 BRPF1P55201 1214 aaPredicted RBP29.79■■■□□ 2.36
GBX1-201ENST00000297537 BCL2L13Q9BXK5 485 aa29.79■■■□□ 2.36
GBX1-201ENST00000297537 ABCC4O15439 1325 aa29.78■■■□□ 2.36
GBX1-201ENST00000297537 PTPRCP08575 1304 aa29.78■■■□□ 2.36
GBX1-201ENST00000297537 RASSF7Q02833 373 aa29.78■■■□□ 2.36
GBX1-201ENST00000297537 OLFM4Q6UX06 510 aa29.78■■■□□ 2.36
GBX1-201ENST00000297537 FER1L6Q2WGJ9 1857 aa29.77■■■□□ 2.36
GBX1-201ENST00000297537 RARSP54136 660 aaKnown RBP29.77■■■□□ 2.36
GBX1-201ENST00000297537 LTBP3Q9NS15 1303 aa29.76■■■□□ 2.36
GBX1-201ENST00000297537 PDE8AO60658 829 aa29.76■■■□□ 2.35
GBX1-201ENST00000297537 CASP7P55210 303 aa29.76■■■□□ 2.35
GBX1-201ENST00000297537 CCDC93Q567U6 631 aa29.76■■■□□ 2.35
GBX1-201ENST00000297537 C9orf131Q5VYM1 1079 aa29.76■■■□□ 2.35
GBX1-201ENST00000297537 DDX46Q7L014 1031 aaKnown RBP29.76■■■□□ 2.35
GBX1-201ENST00000297537 SMC4Q9NTJ3 1288 aa29.76■■■□□ 2.35
GBX1-201ENST00000297537 SNED1Q8TER0 1413 aa29.76■■■□□ 2.35
GBX1-201ENST00000297537 BBOX1O75936 387 aa29.75■■■□□ 2.35
GBX1-201ENST00000297537 SBF1O95248 1867 aa29.75■■■□□ 2.35
GBX1-201ENST00000297537 ZNF784Q8NCA9 323 aaPredicted RBP29.75■■■□□ 2.35
GBX1-201ENST00000297537 LMNB1P20700 586 aa29.74■■■□□ 2.35
GBX1-201ENST00000297537 GRAPQ13588 217 aa29.74■■■□□ 2.35
GBX1-201ENST00000297537 CC2D2BQ6DHV5 1058 aa29.74■■■□□ 2.35
GBX1-201ENST00000297537 GRAPLQ8TC17 118 aaPredicted RBP29.74■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms