RNA–Protein interactions for RNA: ENST00000296930.9

NPM1-201, Transcript of nucleophosmin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPM1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-201ENST00000296930 NTSR2O95665 410 aa21.28■■□□□ 1
NPM1-201ENST00000296930 FKBP4Q02790 459 aaKnown RBP eCLIP21.28■■□□□ 13e-6■■□□□ 11.6
NPM1-201ENST00000296930 FAM9BQ8IZU0 186 aa21.28■■□□□ 1
NPM1-201ENST00000296930 SMC1BQ8NDV3 1235 aa21.28■■□□□ 1
NPM1-201ENST00000296930 ANKRD36CQ5JPF3 1778 aa21.27■■□□□ 1
NPM1-201ENST00000296930 HOXB7P09629 217 aa21.27■■□□□ 1
NPM1-201ENST00000296930 KRT24Q2M2I5 525 aa21.27■■□□□ 1
NPM1-201ENST00000296930 COPS6Q7L5N1 327 aa21.27■■□□□ 1
NPM1-201ENST00000296930 RPGRQ92834 1020 aaKnown RBP21.27■■□□□ 1
NPM1-201ENST00000296930 CFAP44Q96MT7 982 aa21.27■■□□□ 1
NPM1-201ENST00000296930 HSP90AB3PQ58FF7 597 aa21.26■□□□□ 0.99
NPM1-201ENST00000296930 HOXA10P31260 410 aaPredicted RBP21.25■□□□□ 0.99
NPM1-201ENST00000296930 AIMP1Q12904 312 aaKnown RBP21.25■□□□□ 0.99
NPM1-201ENST00000296930 XAGE3Q8WTP9 111 aa21.25■□□□□ 0.99
NPM1-201ENST00000296930 OLFM4Q6UX06 510 aa21.25■□□□□ 0.99
NPM1-201ENST00000296930 UTP14AQ9BVJ6 771 aaKnown RBP21.25■□□□□ 0.99
NPM1-201ENST00000296930 RNF123Q5XPI4 1314 aa21.24■□□□□ 0.99
NPM1-201ENST00000296930 POTECB2RU33 542 aa21.24■□□□□ 0.99
NPM1-201ENST00000296930 APAF1O14727 1248 aa21.24■□□□□ 0.99
NPM1-201ENST00000296930 HDGFL1Q5TGJ6 251 aa21.24■□□□□ 0.99
NPM1-201ENST00000296930 CC2D2BQ6DHV5 1058 aa21.24■□□□□ 0.99
NPM1-201ENST00000296930 RBM17Q96I25 401 aaKnown RBP21.23■□□□□ 0.99
NPM1-201ENST00000296930 ZNF277Q9NRM2 450 aaPredicted RBP21.23■□□□□ 0.99
NPM1-201ENST00000296930 CHPF2Q9P2E5 772 aa21.23■□□□□ 0.99
NPM1-201ENST00000296930 CALD1Q05682 793 aaKnown RBP21.23■□□□□ 0.99
NPM1-201ENST00000296930 NLRP3Q96P20 1036 aa21.23■□□□□ 0.99
NPM1-201ENST00000296930 CRAMP1Q96RY5 1269 aa21.23■□□□□ 0.99
NPM1-201ENST00000296930 DDNO94850 711 aaPredicted RBP21.22■□□□□ 0.99
NPM1-201ENST00000296930 SLC10A5Q5PT55 438 aa21.22■□□□□ 0.99
NPM1-201ENST00000296930 MBIPQ9NS73 344 aa21.22■□□□□ 0.99
NPM1-201ENST00000296930 DBF4Q9UBU7 674 aaPredicted RBP21.22■□□□□ 0.99
NPM1-201ENST00000296930 ZNF853P0CG23 659 aa21.21■□□□□ 0.99
NPM1-201ENST00000296930 TCIRG1Q13488 830 aa21.21■□□□□ 0.99
NPM1-201ENST00000296930 GRIPAP1Q4V328 841 aa21.21■□□□□ 0.99
NPM1-201ENST00000296930 SYNE4Q8N205 404 aa21.21■□□□□ 0.99
NPM1-201ENST00000296930 DNAJC5GQ8N7S2 189 aa21.21■□□□□ 0.99
NPM1-201ENST00000296930 PSMD1Q99460 953 aa21.21■□□□□ 0.99
NPM1-201ENST00000296930 SNED1Q8TER0 1413 aa21.21■□□□□ 0.99
NPM1-201ENST00000296930 DUSP27Q5VZP5 1158 aa21.2■□□□□ 0.99
NPM1-201ENST00000296930 NLRP10Q86W26 655 aa21.2■□□□□ 0.99
NPM1-201ENST00000296930 IFT57Q9NWB7 429 aa21.2■□□□□ 0.99
NPM1-201ENST00000296930 IARSP41252 1262 aaKnown RBP21.2■□□□□ 0.98
NPM1-201ENST00000296930 GNAI1P63096 354 aa21.2■□□□□ 0.98
NPM1-201ENST00000296930 SCN4AP35499 1836 aa21.19■□□□□ 0.98
NPM1-201ENST00000296930 C3orf67Q6ZVT6 689 aa21.19■□□□□ 0.98
NPM1-201ENST00000296930 PLBD2Q8NHP8 589 aa21.19■□□□□ 0.98
NPM1-201ENST00000296930 PPEF1O14829 653 aaPredicted RBP21.18■□□□□ 0.98
NPM1-201ENST00000296930 HYPKQ9NX55 129 aa21.18■□□□□ 0.98
NPM1-201ENST00000296930 LAMB2P55268 1798 aa21.18■□□□□ 0.98
NPM1-201ENST00000296930 IQCA1LA6NCM1 817 aa21.18■□□□□ 0.98
NPM1-201ENST00000296930 ANKRD13DQ6ZTN6 518 aa21.18■□□□□ 0.98
NPM1-201ENST00000296930 L3MBTL3Q96JM7 780 aaPredicted RBP21.18■□□□□ 0.98
NPM1-201ENST00000296930 TRMT112Q9UI30 125 aaKnown RBP21.17■□□□□ 0.98
NPM1-201ENST00000296930 SH3TC1Q8TE82 1336 aa21.16■□□□□ 0.98
NPM1-201ENST00000296930 JDP2Q8WYK2 163 aa21.16■□□□□ 0.98
NPM1-201ENST00000296930 TMX4Q9H1E5 349 aaPredicted RBP21.16■□□□□ 0.98
NPM1-201ENST00000296930 FZD9O00144 591 aa21.15■□□□□ 0.98
NPM1-201ENST00000296930 HTRA3P83110 453 aa21.15■□□□□ 0.98
NPM1-201ENST00000296930 ZNF541Q9H0D2 1346 aa21.15■□□□□ 0.98
NPM1-201ENST00000296930 PIAS4Q8N2W9 510 aaPredicted RBP21.15■□□□□ 0.98
NPM1-201ENST00000296930 TCERG1O14776 1098 aaKnown RBP21.14■□□□□ 0.97
NPM1-201ENST00000296930 HCLS1P14317 486 aaPredicted RBP21.14■□□□□ 0.97
NPM1-201ENST00000296930 ABCC4O15439 1325 aa21.14■□□□□ 0.97
NPM1-201ENST00000296930 KLRG1Q96E93 195 aa21.13■□□□□ 0.97
NPM1-201ENST00000296930 ATP6V0A2Q9Y487 856 aa21.13■□□□□ 0.97
NPM1-201ENST00000296930 CHADLQ6NUI6 762 aa21.13■□□□□ 0.97
NPM1-201ENST00000296930 ISCA1Q9BUE6 129 aa21.13■□□□□ 0.97
NPM1-201ENST00000296930 CHMP4AQ9BY43 222 aa21.13■□□□□ 0.97
NPM1-201ENST00000296930 BBOX1O75936 387 aa21.12■□□□□ 0.97
NPM1-201ENST00000296930 HNRNPUQ00839 825 aaKnown RBP eCLIP21.12■□□□□ 0.975e-6■□□□□ 8.3
NPM1-201ENST00000296930 TAF1DQ9H5J8 278 aaPredicted RBP21.12■□□□□ 0.97
NPM1-201ENST00000296930 ELL2O00472 640 aaPredicted RBP21.11■□□□□ 0.97
NPM1-201ENST00000296930 DDX46Q7L014 1031 aaKnown RBP21.11■□□□□ 0.97
NPM1-201ENST00000296930 GPC2Q8N158 579 aa21.11■□□□□ 0.97
NPM1-201ENST00000296930 LARGE2Q8N3Y3 721 aa21.11■□□□□ 0.97
NPM1-201ENST00000296930 DDX60Q8IY21 1712 aaKnown RBP21.11■□□□□ 0.97
NPM1-201ENST00000296930 EIF6P56537 245 aaKnown RBP21.1■□□□□ 0.97
NPM1-201ENST00000296930 HACL1Q9UJ83 578 aa21.1■□□□□ 0.97
NPM1-201ENST00000296930 COL4A5P29400 1685 aa21.1■□□□□ 0.97
NPM1-201ENST00000296930 ATP5J2-PTCD1G3V325 749 aa21.1■□□□□ 0.97
NPM1-201ENST00000296930 POTEIP0CG38 1075 aa21.1■□□□□ 0.97
NPM1-201ENST00000296930 POTEJP0CG39 1038 aa21.1■□□□□ 0.97
NPM1-201ENST00000296930 GOLGA2Q08379 1002 aa21.1■□□□□ 0.97
NPM1-201ENST00000296930 TRIM28Q13263 835 aaKnown RBP21.1■□□□□ 0.97
NPM1-201ENST00000296930 LDHDQ86WU2 507 aa21.1■□□□□ 0.97
NPM1-201ENST00000296930 VPS33BQ9H267 617 aa21.1■□□□□ 0.97
NPM1-201ENST00000296930 CCDC27Q2M243 656 aa21.09■□□□□ 0.97
NPM1-201ENST00000296930 RIC3Q7Z5B4 369 aa21.09■□□□□ 0.97
NPM1-201ENST00000296930 SLC51AQ86UW1 340 aa21.09■□□□□ 0.97
NPM1-201ENST00000296930 SP8Q8IXZ3 490 aa21.09■□□□□ 0.97
NPM1-201ENST00000296930 C8orf58Q8NAV2 365 aa21.09■□□□□ 0.97
NPM1-201ENST00000296930 TAF1P21675 1872 aa21.09■□□□□ 0.97
NPM1-201ENST00000296930 GRAPQ13588 217 aa21.08■□□□□ 0.97
NPM1-201ENST00000296930 SUPT20HQ8NEM7 779 aa21.08■□□□□ 0.97
NPM1-201ENST00000296930 GRAPLQ8TC17 118 aaPredicted RBP21.08■□□□□ 0.97
NPM1-201ENST00000296930 CCDC30Q5VVM6 783 aa21.08■□□□□ 0.96
NPM1-201ENST00000296930 TMC4Q7Z404 712 aa21.08■□□□□ 0.96
NPM1-201ENST00000296930 NIM1KQ8IY84 436 aa21.08■□□□□ 0.96
NPM1-201ENST00000296930 JMYQ8N9B5 988 aa21.08■□□□□ 0.96
NPM1-201ENST00000296930 ZNF428Q96B54 188 aa21.08■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms