RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 CYP7A1P22680 504 aa20.65■□□□□ 0.9
CDC42EP3-201ENST00000295324 BMP2KLQ5H9B9 411 aa20.65■□□□□ 0.9
CDC42EP3-201ENST00000295324 PPP4R3AQ6IN85 833 aa20.65■□□□□ 0.9
CDC42EP3-201ENST00000295324 HMG20BQ9P0W2 317 aa20.65■□□□□ 0.9
CDC42EP3-201ENST00000295324 ATP8B2P98198 1209 aa20.65■□□□□ 0.9
CDC42EP3-201ENST00000295324 TMEM67Q5HYA8 995 aa20.65■□□□□ 0.9
CDC42EP3-201ENST00000295324 PPFIBP1Q86W92 1011 aa20.65■□□□□ 0.9
CDC42EP3-201ENST00000295324 NSFL1CQ9UNZ2 370 aaKnown RBP20.65■□□□□ 0.9
CDC42EP3-201ENST00000295324 LIMCH1Q9UPQ0 1083 aa20.65■□□□□ 0.9
CDC42EP3-201ENST00000295324 CFAP74Q9C0B2 1584 aa20.65■□□□□ 0.9
CDC42EP3-201ENST00000295324 NCOA7Q8NI08 942 aa20.65■□□□□ 0.9
CDC42EP3-201ENST00000295324 DDX21Q9NR30 783 aaKnown RBP eCLIP20.65■□□□□ 0.9
CDC42EP3-201ENST00000295324 BABAM1Q9NWV8 329 aa20.65■□□□□ 0.9
CDC42EP3-201ENST00000295324 NLRP5P59047 1200 aa20.64■□□□□ 0.9
CDC42EP3-201ENST00000295324 ZNF771Q7L3S4 317 aaPredicted RBP20.64■□□□□ 0.9
CDC42EP3-201ENST00000295324 ANKRD2Q9GZV1 360 aa20.64■□□□□ 0.9
CDC42EP3-201ENST00000295324 TMEM266Q2M3C6 531 aa20.64■□□□□ 0.89
CDC42EP3-201ENST00000295324 CCP110O43303 1012 aa20.64■□□□□ 0.89
CDC42EP3-201ENST00000295324 CCDC178Q5BJE1 867 aa20.64■□□□□ 0.89
CDC42EP3-201ENST00000295324 PHACTR3Q96KR7 559 aa20.64■□□□□ 0.89
CDC42EP3-201ENST00000295324 USP21Q9UK80 565 aa20.64■□□□□ 0.89
CDC42EP3-201ENST00000295324 COL17A1Q9UMD9 1497 aaPredicted RBP20.64■□□□□ 0.89
CDC42EP3-201ENST00000295324 ANKRD44Q8N8A2 993 aa20.64■□□□□ 0.89
CDC42EP3-201ENST00000295324 SCLT1Q96NL6 688 aa20.64■□□□□ 0.89
CDC42EP3-201ENST00000295324 CHMP4BP1P59074 171 aa20.63■□□□□ 0.89
CDC42EP3-201ENST00000295324 PLEKHG3A1L390 1219 aa20.63■□□□□ 0.89
CDC42EP3-201ENST00000295324 LTKP29376 864 aa20.63■□□□□ 0.89
CDC42EP3-201ENST00000295324 NAA16Q6N069 864 aaPredicted RBP20.63■□□□□ 0.89
CDC42EP3-201ENST00000295324 FERMT3Q86UX7 667 aa20.63■□□□□ 0.89
CDC42EP3-201ENST00000295324 NUP62CLQ9H1M0 184 aa20.63■□□□□ 0.89
CDC42EP3-201ENST00000295324 CLEC11AQ9Y240 323 aa20.63■□□□□ 0.89
CDC42EP3-201ENST00000295324 FAM98CQ17RN3 349 aaKnown RBP20.62■□□□□ 0.89
CDC42EP3-201ENST00000295324 PARP10Q53GL7 1025 aa20.62■□□□□ 0.89
CDC42EP3-201ENST00000295324 TRAF1Q13077 416 aa20.62■□□□□ 0.89
CDC42EP3-201ENST00000295324 ZNF790Q6PG37 636 aa20.62■□□□□ 0.89
CDC42EP3-201ENST00000295324 TXLNBQ8N3L3 684 aa20.62■□□□□ 0.89
CDC42EP3-201ENST00000295324 CAGE1Q8TC20 777 aa20.62■□□□□ 0.89
CDC42EP3-201ENST00000295324 IQSEC3Q9UPP2 1182 aaPredicted RBP20.62■□□□□ 0.89
CDC42EP3-201ENST00000295324 YEATS2Q9ULM3 1422 aa20.62■□□□□ 0.89
CDC42EP3-201ENST00000295324 CBFA2T2O43439 604 aa20.61■□□□□ 0.89
CDC42EP3-201ENST00000295324 PPP1R12BO60237 982 aaPredicted RBP20.61■□□□□ 0.89
CDC42EP3-201ENST00000295324 HDAC1Q13547 482 aaPredicted RBP20.61■□□□□ 0.89
CDC42EP3-201ENST00000295324 TTLL5Q6EMB2 1281 aa20.61■□□□□ 0.89
CDC42EP3-201ENST00000295324 SCAND2PQ9GZW5 306 aaPredicted RBP20.61■□□□□ 0.89
CDC42EP3-201ENST00000295324 IARSP41252 1262 aaKnown RBP20.61■□□□□ 0.89
CDC42EP3-201ENST00000295324 HAND2P61296 217 aa20.61■□□□□ 0.89
CDC42EP3-201ENST00000295324 TTC22Q5TAA0 569 aa20.61■□□□□ 0.89
CDC42EP3-201ENST00000295324 DEF6Q9H4E7 631 aa20.61■□□□□ 0.89
CDC42EP3-201ENST00000295324 F8W031 263 aaPredicted RBP20.6■□□□□ 0.89
CDC42EP3-201ENST00000295324 VAMP4O75379 141 aa20.6■□□□□ 0.89
CDC42EP3-201ENST00000295324 CNBD1Q8NA66 436 aa20.6■□□□□ 0.89
CDC42EP3-201ENST00000295324 SAMD9Q5K651 1589 aa20.6■□□□□ 0.89
CDC42EP3-201ENST00000295324 CDR1P51861 262 aa20.6■□□□□ 0.89
CDC42EP3-201ENST00000295324 NEK1Q96PY6 1258 aa20.6■□□□□ 0.89
CDC42EP3-201ENST00000295324 IBSPP21815 317 aaPredicted RBP20.6■□□□□ 0.89
CDC42EP3-201ENST00000295324 NF2P35240 595 aa20.6■□□□□ 0.89
CDC42EP3-201ENST00000295324 STX8Q9UNK0 236 aa20.6■□□□□ 0.89
CDC42EP3-201ENST00000295324 BAG4O95429 457 aaKnown RBP20.6■□□□□ 0.89
CDC42EP3-201ENST00000295324 RUFY1Q96T51 708 aa20.6■□□□□ 0.89
CDC42EP3-201ENST00000295324 TARBP1Q13395 1621 aaKnown RBP20.6■□□□□ 0.89
CDC42EP3-201ENST00000295324 TRIM21P19474 475 aaKnown RBP20.6■□□□□ 0.89
CDC42EP3-201ENST00000295324 PLCG2P16885 1265 aa20.59■□□□□ 0.89
CDC42EP3-201ENST00000295324 KRT23Q9C075 422 aa20.59■□□□□ 0.89
CDC42EP3-201ENST00000295324 MYO6Q9UM54 1294 aa20.59■□□□□ 0.89
CDC42EP3-201ENST00000295324 USP16Q9Y5T5 823 aa20.59■□□□□ 0.89
CDC42EP3-201ENST00000295324 MPHOSPH6Q99547 160 aaKnown RBP20.59■□□□□ 0.89
CDC42EP3-201ENST00000295324 RBM17Q96I25 401 aaKnown RBP20.59■□□□□ 0.89
CDC42EP3-201ENST00000295324 MYCNP04198 464 aaPredicted RBP20.58■□□□□ 0.89
CDC42EP3-201ENST00000295324 HOXB7P09629 217 aa20.58■□□□□ 0.89
CDC42EP3-201ENST00000295324 IL27Q8NEV9 243 aa20.58■□□□□ 0.89
CDC42EP3-201ENST00000295324 ARGLU1Q9NWB6 273 aaPredicted RBP20.58■□□□□ 0.89
CDC42EP3-201ENST00000295324 SLC4A4Q9Y6R1 1079 aa20.58■□□□□ 0.89
CDC42EP3-201ENST00000295324 MCM5P33992 734 aa20.58■□□□□ 0.89
CDC42EP3-201ENST00000295324 ESR2Q92731 530 aa20.58■□□□□ 0.89
CDC42EP3-201ENST00000295324 CWF19L2Q2TBE0 894 aaKnown RBP20.58■□□□□ 0.88
CDC42EP3-201ENST00000295324 TMTC2Q8N394 836 aa20.58■□□□□ 0.88
CDC42EP3-201ENST00000295324 CNNM2Q9H8M5 875 aa20.58■□□□□ 0.88
CDC42EP3-201ENST00000295324 VAT1LQ9HCJ6 419 aa20.58■□□□□ 0.88
CDC42EP3-201ENST00000295324 CCT2P78371 535 aaKnown RBP20.57■□□□□ 0.88
CDC42EP3-201ENST00000295324 SLC9C2Q5TAH2 1124 aa20.57■□□□□ 0.88
CDC42EP3-201ENST00000295324 TSPY3P0CV98 308 aa20.57■□□□□ 0.88
CDC42EP3-201ENST00000295324 TSPY8P0CW00 308 aa20.57■□□□□ 0.88
CDC42EP3-201ENST00000295324 IL13P35225 146 aa20.57■□□□□ 0.88
CDC42EP3-201ENST00000295324 SMTNL1A8MU46 457 aa20.57■□□□□ 0.88
CDC42EP3-201ENST00000295324 DNAI2Q9GZS0 605 aa20.57■□□□□ 0.88
CDC42EP3-201ENST00000295324 PRIM1P49642 420 aaKnown RBP20.57■□□□□ 0.88
CDC42EP3-201ENST00000295324 TBC1D9Q6ZT07 1266 aa20.56■□□□□ 0.88
CDC42EP3-201ENST00000295324 MICU3Q86XE3 530 aa20.56■□□□□ 0.88
CDC42EP3-201ENST00000295324 ACBD3Q9H3P7 528 aa20.56■□□□□ 0.88
CDC42EP3-201ENST00000295324 SH3TC1Q8TE82 1336 aa20.56■□□□□ 0.88
CDC42EP3-201ENST00000295324 PATL2C9JE40 543 aaKnown RBP20.56■□□□□ 0.88
CDC42EP3-201ENST00000295324 TSHZ3Q63HK5 1081 aa20.56■□□□□ 0.88
CDC42EP3-201ENST00000295324 MAGI2Q86UL8 1455 aa20.56■□□□□ 0.88
CDC42EP3-201ENST00000295324 METAP2P50579 478 aaKnown RBP eCLIP20.56■□□□□ 0.88
CDC42EP3-201ENST00000295324 NOM1Q5C9Z4 860 aaKnown RBP20.56■□□□□ 0.88
CDC42EP3-201ENST00000295324 PLBD2Q8NHP8 589 aa20.56■□□□□ 0.88
CDC42EP3-201ENST00000295324 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.56■□□□□ 0.88
CDC42EP3-201ENST00000295324 DDX17Q92841 729 aaKnown RBP20.56■□□□□ 0.88
CDC42EP3-201ENST00000295324 DESP17661 470 aa20.56■□□□□ 0.88
CDC42EP3-201ENST00000295324 WTAPQ15007 396 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms